CF836158

Overview
NameCF836158
Unique NameCF836158
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length789
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836158 vs. ExPASy Swiss-Prot
Match: TLPH_ARATH (Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 8.335e-37
Identity = 90/230 (39.13%), Postives = 111/230 (48.26%), Query Frame = -3
Query:  152 LYLTWVNAATFDIRNNCPYTVWAAAVPGGGRRLDRGQNWPLNVN-------PGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQ-AYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSG-GCNRVIRCTADIVGQCPNELRVPG-------GCNGPCPVFKTEEHCC-----NSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 778
            L L+  +A+T    N C + VW    P  G+ L  G  + L  N       P   + R W R  C FD +GRG C TGDCGG L C  A G PP TLAE  L     LDF D+S +DG+N+ M    V G G      C +D+   CP  L+V          C   C  F + ++CC     N   C PT +S+ FK  CP AYSY  DD TS+ TC    NY V FCP
Sbjct:   13 LLLSHASASTVIFYNKCKHPVWPGIQPSAGQNLLAGGGFKLPANKAHSLQLPPLWSGRFWGRHGCTFDRSGRGHCATGDCGGSLSCNGAGGEPPATLAEITLG--PELDFYDVSLVDGYNLAMSIMPVKGSGQCSYAGCVSDLNQMCPVGLQVRSRNGKRVVACKSACSAFNSPQYCCTGLFGNPQSCKPTAYSKIFKVACPKAYSYAYDDPTSIATC-SKANYIVTFCP 239          
BLAST of CF836158 vs. ExPASy Swiss-Prot
Match: TLP_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os12g0628600 PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.089e-36
Identity = 86/211 (40.76%), Postives = 104/211 (49.29%), Query Frame = -3
Query:  152 TLYLTWVNAATFDIRNNCPYTVWAAAVP-GGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSGGCNRVIRCTADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 781
            TL     NAATF I N C +TVW AA P GGG +L  GQ W +NV  GT + R+W RT C FDG+GRG C TGDC G L C   G  P TLAEF +   Q  DF D+S IDG+NV M FS           C++ +   C +                                      RCPDAY +P+D+ T    C G +NY+VVFCP
Sbjct:   18 TLAAGGANAATFTITNRCSFTVWPAATPVGGGVQLSPGQTWTINVPAGTSSGRVWGRTGCSFDGSGRGSCATGDCAGALSCTLSGQKPLTLAEFTIGGSQ--DFYDLSVIDGYNVAMSFS-----------CSSGVTVTCRD-------------------------------------SRCPDAYLFPEDN-TKTHACSGNSNYQVVFCP 177          
BLAST of CF836158 vs. ExPASy Swiss-Prot
Match: TLP_PRUAV (Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.572e-35
Identity = 85/225 (37.78%), Postives = 110/225 (48.89%), Query Frame = -3
Query:  152 NAATFDIRNNCPYTVWAAAVPGG--------GRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCG-GLLQCQAYGS-PPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSG-GCNRVIRCTADIVGQCPNELRVPGG------CNGPCPVFKTEEHCCNSGK-----CGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 760
            +AAT   +NNCPY VW   +           G  L    ++ L+  P     R WART C  D +G+  C T DC  G + C   G+ PP TLAEF +      DF D+S +DGFN+PM  +   G G  +   C A++   CP+EL+  G       C   C  F T ++CC   +     C PT +S  F   CPDAYSY  DD    FTC GG NY + FCP
Sbjct:   22 HAATISFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDT-PVPWNGRFWARTGCSTDASGKFVCATADCASGQVMCNGNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPMSVTPQGGTGDCKTASCPANVNAVCPSELQKKGSDGSVVACLSACVKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP 245          
BLAST of CF836158 vs. ExPASy Swiss-Prot
Match: TLP_WHEAT (Thaumatin-like protein PWIR2 OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.738e-34
Identity = 83/212 (39.15%), Postives = 103/212 (48.58%), Query Frame = -3
Query:  152 LTLYLTWVNAATFDIRNNCPYTVWAAAVP-GGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSGGCNRVIRCTADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 784
            L ++    +AATF+I+NNC +T+W A +P GGG  L  GQ   +NV  GT+A RIWART C F+G G G CQTGDCGG L C   G PP TLAE+ +      DF DIS IDGFN+ M+FS  +G   +                                   C    C P           P AY +P D AT    C G  NY++ FCP
Sbjct:   11 LAVFAAGASAATFNIKNNCGFTIWPAGIPVGGGFALGSGQTSSINVPAGTQAGRIWARTGCSFNG-GSGSCQTGDCGGQLSCSLSGRPPATLAEYTIGGGSTQDFYDISVIDGFNLAMDFSCSTGDALQ-----------------------------------CRDPSCPP-----------PQAYQHPNDVAT--HACSGNNNYQITFCP 173          
BLAST of CF836158 vs. ExPASy Swiss-Prot
Match: PR1A_HORVU (Pathogenesis-related protein 1A/1B OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.738e-34
Identity = 84/212 (39.62%), Postives = 102/212 (48.11%), Query Frame = -3
Query:  152 LTLYLTWVNAATFDIRNNCPYTVWAAAVP-GGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSGGCNRVIRCTADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 784
            L ++    +AATF+I+NNC  T+W A +P GGG  L  GQ   +NV  GT+A RIWART C F+G G G CQTGDCGG L C   G PP TLAEF +      DF DIS IDGFN+ M+FS  +G   +                                   C    C P           P AY +P D AT    C G  NY++ FCP
Sbjct:   11 LAVFAAGASAATFNIKNNCGSTIWPAGIPVGGGFELGSGQTSSINVPAGTQAGRIWARTGCSFNG-GSGSCQTGDCGGQLSCSLSGQPPATLAEFTIGGGSTQDFYDISVIDGFNLAMDFSCSTGDALQ-----------------------------------CRDPSCPP-----------PQAYQHPNDVAT--HACSGNNNYQITFCP 173          
BLAST of CF836158 vs. ExPASy Swiss-Prot
Match: PR1C_HORVU (Pathogenesis-related protein 1C OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.270e-34
Identity = 84/212 (39.62%), Postives = 102/212 (48.11%), Query Frame = -3
Query:  152 LTLYLTWVNAATFDIRNNCPYTVWAAAVP-GGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSGGCNRVIRCTADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 784
            L ++    +AATF+I+NNC  T+W A +P GGG  L  GQ   +NV  GT+A RIWART C F+G G G CQTGDCGG L C   G PP TLAEF +      DF DIS IDGFN+ M+FS  +G   +                                   C    C P           P AY +P D AT    C G  NY++ FCP
Sbjct:   11 LAVFAAGASAATFNIKNNCGSTIWPAGIPVGGGFELGSGQTSSINVPAGTQAGRIWARTGCSFNG-GSGSCQTGDCGGQLSCSLSGRPPATLAEFTIGGGSTQDFYDISVIDGFNLAMDFSCSTGDALQ-----------------------------------CRDPSCPP-----------PQAYQHPNDVAT--HACSGNNNYQITFCP 173          
BLAST of CF836158 vs. ExPASy Swiss-Prot
Match: TLP1_CASSA (Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.510e-33
Identity = 80/230 (34.78%), Postives = 116/230 (50.43%), Query Frame = -3
Query:  152 YLTWVNAATFDIRNNCPYTVWAAAV--------PGGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCG-GLLQCQAYGS-PPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSG-GCNRVIRCTADIVGQCPNELRVPGG------CNGPCPVFKTEEHCCNSG-----KCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 775
            +L+  ++A     NNCP T+W   +        P  G  L    +  L V    K  R WART C  + +G+  C+T DC  G + C   G+ PP +L E  +   + +DF D+S +DG+N+P+  ++  G G  +   C A++   CP EL+V G       C   C  F   ++CC         C  TK+SR FK++CP AYSY  DD+TS FTC G  +Y + FCP
Sbjct:   16 FLSGAHSAKITFTNNCPRTIWPGTLTSDQKPQLPNTGFVLASKASLTLGVQAPWKG-RFWARTRCTTN-SGKFTCETADCSTGQVACNGNGAIPPASLVEINIAANRGMDFYDVSLVDGYNLPVSVATRGGTGDCKATSCRANVNAVCPAELQVKGSDASVLACKSACTAFNQPQYCCTGAFDTARTCPATKYSRIFKQQCPQAYSYAYDDSTSTFTCSGAPDYVITFCP 243          
BLAST of CF836158 vs. ExPASy Swiss-Prot
Match: TP1A_MALDO (Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.591e-33
Identity = 79/230 (34.35%), Postives = 111/230 (48.26%), Query Frame = -3
Query:  152 LYLTWVNAATFDIRNNCPYTVWAAAVPGGGRR------LDRGQNWPLNVN-PGTKAARIWARTNCQFDGAGRGRCQTGDCG-GLLQCQAYGS-PPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSG-GCNRVIRCTADIVGQCPNELRVPGG------CNGPCPVFKTEEHCCNSGK-----CGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 778
            L+ +  +AA     NNCP TVW   + G  +        +       +V+ P   + R W RT C  D AG+  C+T DCG G + C   G+ PP TL E  +      D+ D+S +DGFN+PM  +   G G  +   C A++   CP  L+V         C   C  F   ++CC         C PT++S  F+++CP AYSY  DD  S FTC GG +Y + FCP
Sbjct:   17 LFFSGAHAAKITFTNNCPNTVWPGTLTGDQKPQLSLTGFELASKASRSVDAPSPWSGRFWGRTRCSTDAAGKFTCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPMSVAPQGGTGECKPSSCPANVNKVCPAPLQVKAADGSVISCKSACLAFGDSKYCCTPPNNTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFCP 246          
BLAST of CF836158 vs. ExPASy Swiss-Prot
Match: TLPH_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.624e-32
Identity = 82/217 (37.79%), Postives = 105/217 (48.39%), Query Frame = -3
Query:  152 NNCPYTVWAAAV--------PGGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQ-AYGSPPNTLAEFALNQFQN-LDFIDISNIDGFNVPMEFSSVSGGCN-RVIRCTADIVGQCPNELRV------PGGCNGPCPVFKTEEHCC-----NSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 736
            NNC  +VW   +          GG  L  G+   L V P   + R+W R  C FD  GRG C TGDCGG+L+C  A G+ P T+ E  L    + + F D+S +DGFN P+  ++V GG       C AD+   CP+ L V        GC   C     + +CC     +   C PT FS  FK  CP AYSY  DDATS+  C     Y + FCP
Sbjct:   35 NNCGESVWPGLLGTAGHPTPQSGGFHLGAGEEAALEV-PAGWSGRVWPRRGCSFDSRGRGSCATGDCGGVLRCNGAAGATPATVVEMTLGTSASAMHFYDVSLVDGFNAPVSMAAVGGGVGCGTAACGADVNVCCPSALEVRDREGRVAGCRSACRAMGGDRYCCTGDYASPSACRPTIFSHLFKAICPRAYSYAYDDATSLNRC-HAKRYLITFCP 249          
BLAST of CF836158 vs. ExPASy Swiss-Prot
Match: TLP1_PRUPE (Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.733e-32
Identity = 81/231 (35.06%), Postives = 108/231 (46.75%), Query Frame = -3
Query:  152 LYLTWVNAATFDIRNNCPYTVWAAAVPGG--------GRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCG-GLLQCQAYGS-PPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSG-GCNRVIRCTADIVGQCPNELRVPGG------CNGPCPVFKTEEHCCNSGK-----CGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 778
            L+ +  +AA     N C YTVW   + G         G  L  G +  ++  P   + R + RT C  D +G+  C T DCG G + C   G+ PP TL E  +      DF D+S +DGFN+PM  +   G G  +   C ADI   CP  L+V G       C   C  F   ++CC         C P  +S+ FK +CP AYSY  DD +S FTC G   Y + FCP
Sbjct:   17 LFFSGAHAAKITFTNKCSYTVWPGTLTGDQKPQLSLTGFELATGISRSVDA-PSPWSGRFFGRTRCSTDASGKFTCATADCGSGQVSCNGNGAAPPATLVEITIASNGGQDFYDVSLVDGFNLPMSVAPQGGTGKCKASTCPADINKVCPAPLQVKGSDGSVIACKSACLAFNQPKYCCTPPNDKPETCPPPDYSKLFKTQCPQAYSYAYDDKSSTFTCSGRPAYLITFCP 246          
The following BLAST results are available for this feature:
BLAST of CF836158 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
TLPH_ARATH8.335e-3739.13Thaumatin-like protein OS=Arabidopsis thaliana GN=... [more]
TLP_ORYSJ1.089e-3640.76Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]
TLP_PRUAV1.572e-3537.78Glucan endo-1,3-beta-glucosidase OS=Prunus avium P... [more]
TLP_WHEAT1.738e-3439.15Thaumatin-like protein PWIR2 OS=Triticum aestivum ... [more]
PR1A_HORVU1.738e-3439.62Pathogenesis-related protein 1A/1B OS=Hordeum vulg... [more]
PR1C_HORVU2.270e-3439.62Pathogenesis-related protein 1C OS=Hordeum vulgare... [more]
TLP1_CASSA2.510e-3334.78Thaumatin-like protein 1 OS=Castanea sativa GN=TL1... [more]
TP1A_MALDO5.591e-3334.35Thaumatin-like protein 1a OS=Malus domestica GN=TL... [more]
TLPH_ORYSJ3.624e-3237.79Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]
TLP1_PRUPE4.733e-3235.06Thaumatin-like protein 1 OS=Prunus persica PE=2 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02I05_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02I05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836158 ID=CF836158; Name=CF836158; organism=Citrus sinensis; type=EST; length=789bp
AACTCTACTTTAGAAGATTTATTAATGCCTCACGGCTTGAAGCCACAAAG
GCAAATTAAAGCCTTATTCCTTACACATATATTGCAGCGACCTTACAACG
TATAGCAGATAATTCCAACCAACAAATGATAGGCAGCTGATTCAATCTTC
ACGGGCAGAACACAACCTTATAATTAGTCCCACCAGGACAAGTGAAGACG
CTTGTTGCATCATCTTTAGGGTAACTATAAGCATCCGGGCACCTTTCCTT
GAAAAACCTGGAGAATTTTGTAGGTCCACATTTGCCTGAATTGCAACAGT
GCTCTTCGGTCTTGAACACGGGACATGGCCCATTACATCCTCCGGGAACC
CTCAATTCATTCGGGCACTGCCCGACAATATCAGCCGTACATCTAATCAC
ACGGTTGCATCCTCCGGACACCGAACTGAATTCCATAGGAACATTAAACC
CATCAATGTTCGAAATATCAATAAAATCCAAGTTTTGGAACTGGTTTAGT
GCAAATTCAGCTAAGGTGTTGGGGGGTGAGCCATAGGCTTGACATTGGAG
TAGTCCCCCACAGTCACCAGTCTGGCACCGCCCGCGCCCGGCTCCATCGA
ATTGGCAGTTCGTCCTAGCCCAGATGCGGGCTGCCTTGGTGCCGGGGTTG
ACATTAAGGGGCCAGTTTTGGCCACGGTCGAGTCTCCTGCCTCCGCCTGG
CACTGCTGCAGCCCAGACCGTGTAGGGGCAATTGTTTCTGATATCGAAAG
TGGCTGCGTTGACCCAAGTTAAGTATAGGGTGAGAAAAA
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