CF836158
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836158 vs. ExPASy Swiss-Prot
Match: RST4_AVESA (Thaumatin-like pathogenesis-related protein 4 OS=Avena sativa GN=RASTL-4 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.007e-31 Identity = 82/212 (38.68%), Postives = 103/212 (48.58%), Query Frame = -3 Query: 152 LTLYLTWVNAATFDIRNNCPYTVWAAAVP-GGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSGGCNRVIRCTADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 784 L ++ +AATF I NNC YTVW AA+P GGG++LD+GQ W LNV GT + RIW RT C F+G G G CQTGDC G L C G P TLAEF++ D+ DIS ID +N+ M+FS C+ QC + CPDAY P D T +C +NY++ FCP Sbjct: 12 LAVFAASASAATFTITNNCGYTVWPAAIPVGGGQQLDQGQTWTLNVPAGTNSGRIWGRTGCSFNG-GSGSCQTGDCAGALSCTLSGQPA-TLAEFSIG--GEHDYYDISVIDVYNLAMDFS-----------CSTGDALQCRD-------------------------------------SSCPDAYHQPDDPKT--HSCNTNSNYQITFCP 169
BLAST of CF836158 vs. ExPASy Swiss-Prot
Match: TP1B_MALDO (Thaumatin-like protein 1b (Fragment) OS=Malus domestica PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 9.869e-30 Identity = 67/179 (37.43%), Postives = 92/179 (51.40%), Query Frame = -3 Query: 152 PGTKAARIWARTNCQFDGAGRGRCQTGDCG-GLLQCQAYGS-PPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSG-GCNRVIRCTADIVGQCPNELRVPGG------CNGPCPVFKTEEHCCNSGK-----CGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 646 P + R W RT C D AG+ C+T DCG G + C G+ PP TL E + D+ D+S +DGFN+PM + G G + C A++ CP +L+V C C F ++CC C PT++S F+++CP AYSY DD S FTC GG +Y + FCP Sbjct: 34 PSPWSGRFWGRTRCSTDAAGKFSCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPMSVAPQGGTGECKPSSCPANVNMACPAQLQVKAADGSVISCKSACLAFGDSKYCCTPPNDTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFCP 212
BLAST of CF836158 vs. ExPASy Swiss-Prot
Match: RST1_AVESA (Thaumatin-like pathogenesis-related protein 1 OS=Avena sativa GN=RASTL-1 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.289e-29 Identity = 80/212 (37.74%), Postives = 102/212 (48.11%), Query Frame = -3 Query: 152 LTLYLTWVNAATFDIRNNCPYTVWAAAVP-GGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSGGCNRVIRCTADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 784 L ++ +AATF I NNC +TVW A +P GGG +L+ Q+ +NV GT A RIW RT C F+ GRG C TGDC G L C G P TLAE+ + Q DF DIS IDGFN+ M+FS C+ + +C + CPDAY +P D AT C G +NY++ FCP Sbjct: 12 LAVFAAGASAATFRITNNCGFTVWPAGIPVGGGFQLNSKQSSNINVPAGTSAGRIWGRTGCSFNN-GRGSCATGDCAGALSCTLSGQPA-TLAEYTIGGSQ--DFYDISVIDGFNLAMDFS-----------CSTGVALKCRD-------------------------------------ANCPDAYHHPNDVAT--HACNGNSNYQITFCP 169
BLAST of CF836158 vs. ExPASy Swiss-Prot
Match: RST3_AVESA (Thaumatin-like pathogenesis-related protein 3 OS=Avena sativa GN=RASTL-3 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.199e-29 Identity = 81/212 (38.21%), Postives = 103/212 (48.58%), Query Frame = -3 Query: 152 LTLYLTWVNAATFDIRNNCPYTVWAAAVP-GGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSGGCNRVIRCTADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 784 L ++ +AATF I NNC +TVW A +P GGG +L+ Q+ +NV GT A RIW RT C F+ GRG C TGDC G L C G P TLAE+ + Q DF DIS IDG+N+ M+FS +G + C +SG CPDAY +P D AT C G +NY++ FCP Sbjct: 12 LAVFAAGASAATFRITNNCGFTVWPAGIPVGGGFQLNSKQSSNINVPAGTSAGRIWGRTGCSFNN-GRGSCATGDCAGALSCTLSGQPA-TLAEYTIGGSQ--DFYDISVIDGYNLAMDFSCSTGVALK----------------------------------CRDSG--------------CPDAYHHPNDVAT--HACNGNSNYQITFCP 169
BLAST of CF836158 vs. ExPASy Swiss-Prot
Match: RST2_AVESA (Thaumatin-like pathogenesis-related protein 2 OS=Avena sativa GN=RASTL-2 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.871e-29 Identity = 79/212 (37.26%), Postives = 102/212 (48.11%), Query Frame = -3 Query: 152 LTLYLTWVNAATFDIRNNCPYTVWAAAVP-GGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSGGCNRVIRCTADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 784 L ++ +AATF I NNC +TVW A +P GGG +L+ Q+ +NV GT A RIW RT C F+ GRG C TGDC G L C G P TLAE+ + Q DF DIS IDG+N+ M+FS C+ + +C + CPDAY +P D AT C G +NY++ FCP Sbjct: 12 LAVFAAGASAATFRITNNCGFTVWPAGIPVGGGFQLNSKQSSNINVPAGTSAGRIWGRTGCSFNN-GRGSCATGDCAGALSCTLSGQPA-TLAEYTIGGSQ--DFYDISVIDGYNLAMDFS-----------CSTGVALKCRD-------------------------------------ANCPDAYHHPNDVAT--HACNGNSNYQITFCP 169
BLAST of CF836158 vs. ExPASy Swiss-Prot
Match: OLP1_SOLLC (Osmotin-like protein OS=Solanum lycopersicum PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.750e-29 Identity = 77/219 (35.16%), Postives = 109/219 (49.77%), Query Frame = -3 Query: 155 NNCPYTVWAAAVPGGGRR-LDRG----QNWPLNVNPGTKA---ARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYG-SPPNTLAEFALNQFQNLDF--IDISNIDGFNVPMEFSSVSG-GCNRVIRCTADIVGQCPNELRVPG--------GCNGPCPVFKTEEHCCNSG-----KCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFC 736 NNCPYT+W A P G L+RG + P A RIWART C + G+ C TGDCGG ++C G + P TLA+F L+ + DF +S +DGFN+P+ + G G V+ C A+++ CP L+ GC C FK++E CC + C P+ +S+FFK CP ++Y D + + C KV+FC Sbjct: 35 NNCPYTIWPAIQPNAGHPVLERGGFTLHSLTHRSFPAPNAHWSGRIWARTGCNYQH-GKFYCATGDCGGRIECDGLGGAAPATLAQFVLHH-GHADFSTYGVSLVDGFNIPLTVTPHEGKGVCPVVGCRANLLESCPAVLQFRSHGGHGPVVGCKSACEAFKSDEFCCRNHYNSPQTCKPSSYSQFFKHACPATFTYAHDSPSLMHECSSPRELKVIFC 251
BLAST of CF836158 vs. ExPASy Swiss-Prot
Match: PRR3_JUNVI (Pathogenesis-related protein (Fragment) OS=Juniperus virginiana PE=1 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 2.275e-26 Identity = 50/94 (53.19%), Postives = 65/94 (69.15%), Query Frame = -3 Query: 503 LTLYLTWVNAATFDIRNNCPYTVWAAAVPGGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEF 784 ++ ++ A FDI+N C YTVWAA +PGGG+RLD+GQ W +N+ GT +AR W RT C FD +G+G CQTGDCG L C G+ P TLAE+ Sbjct: 10 ISSHMQEAGAVKFDIKNQCGYTVWAAGLPGGGKRLDQGQTWTVNLAAGTASARFWGRTGCTFDASGKGSCQTGDCGRQLSCTVSGAVPATLAEY 103 The following BLAST results are available for this feature:
BLAST of CF836158 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF836158 ID=CF836158; Name=CF836158; organism=Citrus sinensis; type=EST; length=789bpback to top |