CF836175

Overview
NameCF836175
Unique NameCF836175
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length816
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2774 contig Csv1_Contig2774:1152..1967. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF836175 vs. ExPASy Swiss-Prot
Match: NAC22_ARATH (NAC domain-containing protein 21/22 OS=Arabidopsis thaliana GN=NAC021 PE=1 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 5.919e-41
Identity = 76/158 (48.10%), Postives = 107/158 (67.72%), Query Frame = 2
Query:  125 QLNLPPGFRFYPTDEELLVQYLCRK-VAGQHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRL---FEPSRKNGSSKLDDWVLCRIYKKHS 586
            +  LPPGFRF+P D+EL+  YL R+ +   H    ++ ++DL K +PW +P  A  G K+WYF+S RDRKY  G R NR   +GYWKATG D+ I  +G+ VG++K LVFY G+AP+G KT+W+MHE+RL     P   + SS  +DWVLCR++ K++
Sbjct:   16 EAKLPPGFRFHPKDDELVCDYLMRRSLHNNHRPPLVLIQVDLNKCEPWDIPKMACVGGKDWYFYSQRDRKYATGLRTNRATATGYWKATGKDRTILRKGKLVGMRKTLVFYQGRAPRGRKTDWVMHEFRLQGSHHPPNHSLSSPKEDWVLCRVFHKNT 173          
BLAST of CF836175 vs. ExPASy Swiss-Prot
Match: NAC12_ARATH (NAC domain-containing protein 12 OS=Arabidopsis thaliana GN=NAC012 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.249e-40
Identity = 78/165 (47.27%), Postives = 108/165 (65.45%), Query Frame = 2
Query:  125 QLNLPPGFRFYPTDEELLVQYLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFG---EKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLFEPSRKNG----------SSKLDDWVLCRIYKK 580
            Q  +PPGFRF+PT+EELL  YL +KV  Q   L +I E+DL K +PW +  +   G   + +WYFFS +D+KYP G+R NR   +G+WKATG DKII +  R++G++K LVFY G+AP G K++WIMHEYRL +    NG          S   + WV+CR+++K
Sbjct:   13 QSKVPPGFRFHPTEEELLHYYLRKKVNSQKIDLDVIREVDLNKLEPWDIQEECRIGSTPQNDWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKIICSCVRRIGLRKTLVFYKGRAPHGQKSDWIMHEYRLDDTPMSNGYADVVTEDPMSYNEEGWVVCRVFRK 177          
BLAST of CF836175 vs. ExPASy Swiss-Prot
Match: NAC43_ARATH (NAC domain-containing protein 43 OS=Arabidopsis thaliana GN=NAC043 PE=2 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 3.837e-40
Identity = 82/184 (44.57%), Postives = 113/184 (61.41%), Query Frame = 2
Query:  125 QLNLPPGFRFYPTDEELLVQYLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFG---EKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLFE-------------PSRKNGSSKLDDWVLCRIYKK---HSGSQKPVSATSV 619
            Q  +PPGFRF+PT+EELL  YL +KV      L +I ++DL K +PW +      G   + +WYFFS +D+KYP G+R NR   +G+WKATG DKII + GR++G++K LVFY G+AP G K++WIMHEYRL +              S    +S+ + WV+CRI+KK   H     PV   S+
Sbjct:   13 QSQVPPGFRFHPTEEELLQYYLRKKVNSIEIDLDVIRDVDLNKLEPWDIQEMCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSNGRRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDDNIISPEDVTVHEVVSIIGEASQDEGWVVCRIFKKKNLHKTLNSPVGGASL 196          
BLAST of CF836175 vs. ExPASy Swiss-Prot
Match: NAC78_ARATH (NAC domain-containing protein 78 OS=Arabidopsis thaliana GN=NAC078 PE=2 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 1.904e-39
Identity = 78/161 (48.45%), Postives = 101/161 (62.73%), Query Frame = 2
Query:  122 SQLNLPPGFRFYPTDEELLVQYLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFGEK--EWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLFEPSRKNGSSKLDDWVLCRIYKKHSGSQK 598
            S  +L PGFRF+PTDEEL+  YL RKV  + F    I   D+YK +PW LP K+    +  EWYFFS  D+KY NGS+ NR    GYWK TG D+ I    R VG+KK LV++ G+AP+G +TNW+MHEYRL +   K      + +VLCRI++K     K
Sbjct:    5 SVTSLAPGFRFHPTDEELVRYYLKRKVCNKPFKFDAISVTDIYKSEPWDLPDKSKLKSRDLEWYFFSMLDKKYSNGSKTNRATEKGYWKTTGKDREIRNGSRVVGMKKTLVYHKGRAPRGERTNWVMHEYRLSDEDLKKAGVPQEAYVLCRIFQKSGTGPK 165          
BLAST of CF836175 vs. ExPASy Swiss-Prot
Match: NAC66_ARATH (NAC domain-containing protein 66 OS=Arabidopsis thaliana GN=NAC066 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.591e-38
Identity = 76/179 (42.46%), Postives = 110/179 (61.45%), Query Frame = 2
Query:  125 QLNLPPGFRFYPTDEELLVQYLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFG---EKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLFEPSRKNGSSKLD-------------DWVLCRIYKKHSGSQKPVSAT 613
            Q  +PPGFRF+PT+EELL  YL +K++     L +I +IDL K +PW +      G   + +WYF+S +D+KYP G+R NR    G+WKATG DK I T G ++G++K LVFY G+AP G K++WIMHEYRL E    +     D              WV+CR++KK++  +  +S++
Sbjct:    8 QSQVPPGFRFHPTEEELLKYYLRKKISNIKIDLDVIPDIDLNKLEPWDIQEMCKIGTTPQNDWYFYSHKDKKYPTGTRTNRATTVGFWKATGRDKTIYTNGDRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDESVLISSCGDHDVNVETCDVIGSDEGWVVCRVFKKNNLCKNMISSS 186          
BLAST of CF836175 vs. ExPASy Swiss-Prot
Match: NAC74_ORYSJ (NAC domain-containing protein 74 OS=Oryza sativa subsp. japonica GN=NAC74 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.365e-37
Identity = 74/159 (46.54%), Postives = 102/159 (64.15%), Query Frame = 2
Query:  113 DPLSQLNLPPGFRFYPTDEELLVQYLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFG--EKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLFEPSRKNGSSKLDDWVLCRIYKKH 583
            + L  + LPPGF F+P D EL+  YL +K+ GQ    +II E+D+YK +PW LP+K      + +W+FF+ RDRKYPNGSR NR   +GYWK+TG D+ I    + +G KK LVF+ G+ P G +T WIMHEY + E   +      D +VLCRI K++
Sbjct:    2 ESLRDMVLPPGFGFHPKDTELISHYLKKKIHGQKIEYEIIPEVDIYKHEPWDLPAKCDVPTQDNKWHFFAARDRKYPNGSRSNRATVAGYWKSTGKDRAIKMGKQTIGTKKTLVFHEGRPPTGRRTEWIMHEYYIDERECQACPDMKDAYVLCRITKRN 160          
BLAST of CF836175 vs. ExPASy Swiss-Prot
Match: NAC61_ARATH (Putative NAC domain-containing protein 61 OS=Arabidopsis thaliana GN=NAC061 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.565e-25
Identity = 64/153 (41.83%), Postives = 92/153 (60.13%), Query Frame = 2
Query:  134 LPPGFRFYPTDEELLVQYLCRKVAGQHFSLQ-IIGEIDLYKFDPWVLPSKAIFGEK------EWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTD-KIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLFEPSR-----KNGSSKLDD 553
            L  GFRFYPT+ ELL  YL  ++ G + ++  +I  +D++  +P  LP+ A  GE+      +W FF PR  +   G RP+R  GSGYWKATG+   + + + R +G+KK +VFY GKAP G KT W M+EY+  E +      K+GSS+  D
Sbjct:    5 LSVGFRFYPTEVELLTYYLRIQLGGGNATIHSLIPILDVFSVEPTQLPNLA--GERCRGDAEQWIFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSPDNRVIGVKKTMVFYTGKAPTGRKTKWKMNEYKAVETASVSTIPKSGSSRAFD 155          
BLAST of CF836175 vs. ExPASy Swiss-Prot
Match: NAC90_ARATH (NAC domain-containing protein 90 OS=Arabidopsis thaliana GN=NAC090 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.855e-24
Identity = 64/154 (41.56%), Postives = 95/154 (61.69%), Query Frame = 2
Query:  143 GFRFYPTDEELLVQYLCRKVAGQHFSL--QIIGEIDLYKFDPWVLPSKA---IFGEKE-WYFFSPRDRKYPNGSRPNRVAGSGYWKATGT-DKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLFEPSRKNGSS--KL-DDWVLCRIY 574
            GFRFYPT+EEL+  YL  ++ G+      ++I  +D+++ +P  LP+ A     G+ E W+FF PR  +   G RP+R  GSGYWKATG+   + + + + +G KK +VFY GKAP G KT W M+EY   + +  N S+  KL  ++ LCR+Y
Sbjct:    8 GFRFYPTEEELVSFYLRNQLEGRSDDSMHRVIPVLDVFEVEPSHLPNVAGVRCRGDAEQWFFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSKDNKMIGAKKTMVFYTGKAPTGRKTKWKMNEYHAVDET-VNASTIPKLRREFSLCRVY 160          
BLAST of CF836175 vs. ExPASy Swiss-Prot
Match: NAC69_ARATH (NAC domain-containing protein 69 OS=Arabidopsis thaliana GN=NAC69 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.240e-22
Identity = 63/158 (39.87%), Postives = 88/158 (55.70%), Query Frame = 2
Query:  143 GFRFYPTDEELLVQYLCRKVAGQHFSL-QIIGEIDLYKFDPWVLPS--KAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTD-KIITTEGRK--VGIKKALVFYVGKAPKGTKTNWIMHEYRL--FEPSRKNGSSKLDDWVLCRI-YKKHSG 589
            G+RFYPT EEL+  YL  K+ G+ + + + I EI++  +DP  LPS  K    +  WYFF P++          R   SGYWKATG D KI    G +  +GIKK LV+Y G+ PKG  T W+MHEY +      ++N       +V+C++ YK   G
Sbjct:    7 GYRFYPTGEELINHYLKNKILGKTWLVDEAISEINICSYDPIYLPSLSKIKSDDPVWYFFCPKEYTSAKKKVTKRTTSSGYWKATGVDRKIKDKRGNRGEIGIKKTLVYYEGRVPKGVWTPWVMHEYHITCLPQDQRN-------YVICQVMYKGEDG 157          
BLAST of CF836175 vs. ExPASy Swiss-Prot
Match: NAC68_ARATH (NAC domain-containing protein 68 OS=Arabidopsis thaliana GN=NAC68 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.516e-20
Identity = 54/130 (41.54%), Postives = 78/130 (60.00%), Query Frame = 2
Query:  143 GFRFYPTDEELLVQYLCRKVAGQHFSL-QIIGEIDLYKFDPWV-LPSKAIFGEK--EWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTE---GRKVGIKKALVFYVGKAPKGTKTNWIMHEYRL 511
            G+RF PT EE++  YL  K+ G+++ + + I EI++    P   LP  A    +  EWYFFSP +   PN  +  R  GSG+WK TG D+ I  +   G  +GIKK LV++ GK+P G +T W+MHEY +
Sbjct:    7 GYRFSPTGEEVINHYLKNKLLGKYWLVDEAISEINILSHKPSKDLPKLARIQSEDLEWYFFSPIEYTNPNKMKMKRTTGSGFWKPTGVDREIRDKRGNGVVIGIKKTLVYHEGKSPHGVRTPWVMHEYHI 136          
The following BLAST results are available for this feature:
BLAST of CF836175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
NAC22_ARATH5.919e-4148.10NAC domain-containing protein 21/22 OS=Arabidopsis... [more]
NAC12_ARATH2.249e-4047.27NAC domain-containing protein 12 OS=Arabidopsis th... [more]
NAC43_ARATH3.837e-4044.57NAC domain-containing protein 43 OS=Arabidopsis th... [more]
NAC78_ARATH1.904e-3948.45NAC domain-containing protein 78 OS=Arabidopsis th... [more]
NAC66_ARATH3.591e-3842.46NAC domain-containing protein 66 OS=Arabidopsis th... [more]
NAC74_ORYSJ1.365e-3746.54NAC domain-containing protein 74 OS=Oryza sativa s... [more]
NAC61_ARATH1.565e-2541.83Putative NAC domain-containing protein 61 OS=Arabi... [more]
NAC90_ARATH3.855e-2441.56NAC domain-containing protein 90 OS=Arabidopsis th... [more]
NAC69_ARATH1.240e-2239.87NAC domain-containing protein 69 OS=Arabidopsis th... [more]
NAC68_ARATH1.516e-2041.54NAC domain-containing protein 68 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02I18_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02I18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836175 ID=CF836175; Name=CF836175; organism=Citrus sinensis; type=EST; length=816bp
CCAATTTCCATTTCTCCCTCTGCTTGTCCCCATAGCTTTAGCTCAGCATC
TTCATCTATATCTTTTATTCGCAATTCATTTGAAAGCTTGAAAAATGGGC
GTACCGGAGACCGACCCGCTCTCACAATTGAACTTACCTCCGGGTTTTCG
GTTTTACCCGACTGATGAGGAACTTCTAGTTCAATATCTCTGTCGCAAAG
TTGCAGGGCAACATTTTTCGCTGCAAATTATCGGTGAAATAGATTTGTAC
AAGTTTGACCCATGGGTTCTACCAAGCAAGGCAATTTTTGGTGAGAAAGA
ATGGTACTTTTTCAGCCCCAGGGATAGAAAATATCCAAACGGGTCCCGAC
CCAACAGAGTAGCCGGGTCCGGGTATTGGAAGGCCACAGGCACCGACAAG
ATTATCACAACTGAAGGTCGTAAGGTTGGTATCAAAAAGGCTCTTGTTTT
TTACGTAGGCAAAGCTCCAAAAGGCACCAAAACCAATTGGATCATGCACG
AATATCGACTCTTTGAACCTTCTCGCAAAAATGGCAGCTCCAAGTTAGAT
GATTGGGTTCTGTGCAGAATCTATAAGAAGCATTCAGGTTCCCAAAAACC
AGTGTCAGCAACAAGTGTTTCTTCAAGCAAAGAACACAGTAATGGTTCTT
GTTCATCTTCATCTTCTCATCTTGATGATGTGCTCGAGTCTTTACCTGAA
ATTGATGACCGATTTTTCGCTTTGCCGCGCATGAACTCACTCAAGACTTT
ACAGCAAGAAGACAACAAAGGTTACAATTTGCAGCATCTGGGGTCGGGTA
ATTTTGACTGGGCGAG
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