CF836181

Overview
NameCF836181
Unique NameCF836181
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length566
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig765 contig Csv1_Contig765:811..1376. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF836181 vs. ExPASy Swiss-Prot
Match: OST48_CHICK (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Gallus gallus GN=DDOST PE=1 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 4.354e-48
Identity = 93/188 (49.47%), Postives = 125/188 (66.49%), Query Frame = -2
Query:    2 FSNRFFRSGVQKAG-SSIKHEKSGNEQFLTEISKWVFHERGHLKAVNVRHHKVGESDEPAIYRINDDLEYSVEIYEWSGTSWEPYVSDDVQVQFYMMSPYVLKTLSTDQKGHYSAEFKVPDVYGVFQFKVEYQRLGYTSLSLSKQIPVRPYRHNEYERFLPAAYPYYGSAFSMMAGFFIFTIVHLYSK 562
            FS+ FF S VQKA   S ++ ++GN +    +S+WVF E G L+   V HH+VGE   P  Y + D +EYS+ I + S   W P+  DD+Q++F  + P+V +T      G YS +FK+PDVYGVFQFKV+Y RLGYT L  S Q+ VRP +H +YERF+P+AYPYY  AFSMM G F+F+IV L+ K
Sbjct:  221 FSDAFFSSAVQKAAPGSKRYSQTGNYELAVALSRWVFKEEGVLRVGAVSHHRVGELAPPNAYTVTDLVEYSIVIEKLSDGKWIPFDGDDIQLEFVRIDPFV-RTFLKRNGGKYSVQFKLPDVYGVFQFKVDYNRLGYTHLYSSTQVSVRPLQHTQYERFIPSAYPYYAGAFSMMVGLFMFSIVFLHMK 407          
BLAST of CF836181 vs. ExPASy Swiss-Prot
Match: OST48_DROME (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Drosophila melanogaster GN=Ost48 PE=2 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 2.236e-44
Identity = 86/188 (45.74%), Postives = 118/188 (62.77%), Query Frame = -2
Query:    2 FSNRFFRSGVQKAGSSIKHEKSGNEQFLTEISKWVFHERGHLKAVNVRHHKVGESDEP-AIYRINDDLEYSVEIYEWSGTSWEPYVSDDVQVQFYMMSPYVLKTLSTDQKGHYSAEFKVPDVYGVFQFKVEYQRLGYTSLSLSKQIPVRPYRHNEYERFLPAAYPYYGSAFSMMAGFFIFTIVHLYSK 562
            FS+  F + VQ A S + H+ +GN      ISKWVF E G L+  +V+HHK GE   P   Y I D + Y++ I E     W  + + D+Q++F  + P+V   L     G Y A+FK+PDVYGV+QFKV+Y R+GYT L  + Q+ VRP  H +YERF+P+A+PYY SAFSMM G F+F+ V L+ K
Sbjct:  247 FSDESFTTAVQYAQSGVFHKLAGNRDVAESISKWVFGETGRLRVASVQHHKEGELLPPDQAYTITDPVVYTIGIEELVQGEWRAFKASDIQLEFVRIDPFVRTYLKQTNTGAYQAKFKIPDVYGVYQFKVDYNRVGYTHLYSTTQVSVRPLEHTQYERFIPSAFPYYTSAFSMMIGVFVFSFVFLHFK 434          
BLAST of CF836181 vs. ExPASy Swiss-Prot
Match: OST48_CAEEL (Probable dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Caenorhabditis elegans GN=T09A5.11 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 9.395e-43
Identity = 86/189 (45.50%), Postives = 119/189 (62.96%), Query Frame = -2
Query:    2 MFSNRFFRSGVQKAGSSIKHEKSGNEQFLTEISKWVFHERGHLKAVNVRHHKVGESDEPAI-YRINDDLEYSVEIYEWSGTSWEPYVSDDVQVQFYMMSPYVLKTLSTDQKGHYSAEFKVPDVYGVFQFKVEYQRLGYTSLSLSKQIPVRPYRHNEYERFLPAAYPYYGSAFSMMAGFFIFTIVHLYSK 565
            +FSN FF +       S++  +SGN  F T I++WV  E G L+   V HHK GE+  P   Y I +D+ Y++EI E     W P+   DVQ++F  + P+V  TL  +  G  S  FK+PDV GVF+F V+Y+R+GYT L   +Q+ VRP  H +YERF+ +AYPYY S+FSMMAG  +F+IV+LY K
Sbjct:  241 LFSNTFFSAKTNSVNPSVQGAQSGNADFATAITRWVMKESGVLRVKTVNHHKKGETVPPVEGYFITEDVVYTIEIEELKNGKWVPFQGKDVQLEFVRIDPFVRATLK-NSNGRLSVAFKLPDVLGVFKFLVDYRRVGYTHLYDVQQVSVRPLWHTQYERFIRSAYPYYASSFSMMAGLVLFSIVYLYHK 428          
BLAST of CF836181 vs. ExPASy Swiss-Prot
Match: OST48_DICDI (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit homolog OS=Dictyostelium discoideum GN=ddost PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 4.227e-35
Identity = 69/179 (38.55%), Postives = 111/179 (62.01%), Query Frame = -2
Query:    2 SSIKHEKSGNEQFLTEISKWVFHERGHLKAVNVRHHKVGESDE----PAIYRINDDLEYSVEIYEWSGTS--WEPYVSDDVQVQFYMMSPYVLKTLSTDQKGHYSAEFKVPDVYGVFQFKVEYQRLGYTSLSLSKQIPVRPYRHNEYERFLPAAYPYYGSAFSMMAGFFIFTIVHLYSK 520
            S I +++SGN++F+  +  W F ERG L+A  +   K+         P ++ I D+++YS+++ E+ G    W PYV   +Q++  M+ PY+   +  D  G Y   FK+PDVYGVF F+    + GY++L    + P+ P+RH+ YERF+PAA+PYY + FSM+ G FIF+I+ L++K
Sbjct:  244 SKIDNKESGNKEFVERLVSWTFQERGILRASELELVKISTESNSTVAPDVFTIKDEVKYSLKVEEFDGIKGKWVPYVGS-LQLEVIMLDPYIRTFIKGDANGLYKIHFKLPDVYGVFTFEASIHKSGYSTLDHIYRKPILPFRHDSYERFIPAAFPYYATCFSMLIGTFIFSIIFLFNK 421          
BLAST of CF836181 vs. ExPASy Swiss-Prot
Match: OSTB_SCHPO (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Schizosaccharomyces pombe GN=SPCC338.15 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 5.005e-28
Identity = 65/172 (37.79%), Postives = 93/172 (54.07%), Query Frame = -2
Query:    2 NEQFLTEISKWVFHERGHLKAVNVRHHKVGE---SDEPAIYRINDDLEYSVEIYEWSGTSWEPYVSDDVQVQFYMMSPYVLKTL-----STDQKGHYSAEFKVPDVYGVFQFKVEYQRLGYTSLSLSKQIPVRPYRHNEYERFLPAAYPYYGSAFSMMAGFFIFTIVHLYSK 493
            N  F  +++ WVF  +G L+A N+ + KV E   S   + YRI D++ +S++I         PYV+DDVQ++  M+ PY    L      +    HY A    PD YG F FK+EY+R G T +       +R + HNE+ RFLP AYPYY S FS++  F +F  + L  K
Sbjct:  253 NFLFARDLTNWVFQRKGVLQATNMTYGKVAEPLESRNASCYRIKDEMIFSIDISLLEDGQQTPYVADDVQLELIMLDPYYRVNLVPVPSDSQTSQHYEAVLVAPDHYGDFTFKIEYKRPGLTPIEEKSTFTLRQFFHNEFPRFLPHAYPYYASCFSVLGAFLLFCGIWLLQK 424          
BLAST of CF836181 vs. ExPASy Swiss-Prot
Match: OSTB_YEAST (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit WBP1 OS=Saccharomyces cerevisiae GN=WBP1 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.236e-18
Identity = 54/172 (31.40%), Postives = 92/172 (53.49%), Query Frame = -2
Query:   20 KSGNEQFLTEISKWVFHERGHLKAVNVRH-HKVGESDEPAIYRINDDLEYSVEIYEWSGTSWEPYVSDDVQVQFYMMSPYVLKTLS---TDQKGHY--SAEFKVPDVYGVFQFKVEYQRLGYTSLSLSKQIPVRPYRH---NEYERF--LPAAYPYYGSAFSMMAGFFIFTI 502
            +  N++F  E+ KW F+E+  +K+V+  H H  G S +   Y+I D + YSV   EW+G  W P+++DD+Q +   + PY   TLS    D +  Y  + EF +PD +GVF F  +Y+++G   LS +    V+  RH   +EY R   +  ++ Y  +   ++  +  F +
Sbjct:  243 QDSNQEFAKELLKWTFNEKSVIKSVHAVHSHADGTSYDEEPYKIKDKVIYSVGFSEWNGEEWLPHIADDIQFELRQVDPYYRLTLSPSGNDSETQYYTTGEFILPDRHGVFTFLTDYRKIG---LSFTTDKDVKAIRHLANDEYPRSWEISNSWVYISAICGVIVAWIFFVV 411          
The following BLAST results are available for this feature:
BLAST of CF836181 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
OST48_CHICK4.354e-4849.47Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
OST48_DROME2.236e-4445.74Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
OST48_CAEEL9.395e-4345.50Probable dolichyl-diphosphooligosaccharide--protei... [more]
OST48_DICDI4.227e-3538.55Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
OSTB_SCHPO5.005e-2837.79Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
OSTB_YEAST1.236e-1831.40Dolichyl-diphosphooligosaccharide--protein glycosy... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02I22_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02I22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836181 ID=CF836181; Name=CF836181; organism=Citrus sinensis; type=EST; length=566bp
ACTTGCTGTAAAGGTGAACGATGGTGAAGATAAAGAACCCAGCCATCATA
GAAAATGCTGATCCATAATATGGGTAAGCTGCTGGTAAAAATCTTTCGTA
TTCATTGTGTCTGTAGGGCCTGACTGGAATCTGTTTTGATAGGGATAAGC
TGGTGTATCCTAGTCTTTGGTACTCGACCTTGAATTGGAAGACTCCATAA
ACATCTGGAACCTTGAATTCTGCAGAATAGTGACCCTTCTGGTCAGTTGA
TAAGGTTTTCAAAACATAGGGGCTCATCATGTAAAACTGCACTTGAACAT
CATCTGAAACATATGGTTCCCAGCTTGTTCCAGACCACTCATAAATCTCA
ACCGAGTATTCCAAGTCATCATTGATCCTGTAAATTGCAGGTTCATCTGA
TTCTCCAACTTTGTGGTGTCTCACATTCACAGCCTTAAGATGACCTCTTT
CATGGAAAACCCATTTGCTAATTTCTGTCAAAAACTGCTCATTACCTGAT
TTCTCATGTTTAATTGAGCTCCCAGCCTTTTGCACTCCAGATCTGAAGAA
TCGATTGCTGAACATG
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