CF836186
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF836186 vs. ExPASy Swiss-Prot
Match: RSSA_DROVI (40S ribosomal protein SA OS=Drosophila virilis GN=sta PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.438e-30 Identity = 61/93 (65.59%), Postives = 73/93 (78.49%), Query Frame = -1 Query: 515 QTSFNEPRLLIXTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 793 Q +F EPRLL+ TDP TDHQPI EA+ NIP IAF +TDSP+RY+DI IP NNK HSIG ++WLLAR VL++RGTI +W V+VDLFFYR Sbjct: 113 QPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSPHSIGLMWWLLAREVLRLRGTISRTTEWPVVVDLFFYR 205
BLAST of CF836186 vs. ExPASy Swiss-Prot
Match: RSSA_DROMO (40S ribosomal protein SA OS=Drosophila mojavensis GN=sta PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.438e-30 Identity = 61/93 (65.59%), Postives = 73/93 (78.49%), Query Frame = -1 Query: 515 QTSFNEPRLLIXTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 793 Q +F EPRLL+ TDP TDHQPI EA+ NIP IAF +TDSP+RY+DI IP NNK HSIG ++WLLAR VL++RGTI +W V+VDLFFYR Sbjct: 113 QPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSPHSIGLMWWLLAREVLRLRGTISRTTEWPVVVDLFFYR 205
BLAST of CF836186 vs. ExPASy Swiss-Prot
Match: RSSA_DROGR (40S ribosomal protein SA OS=Drosophila grimshawi GN=sta PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.438e-30 Identity = 61/93 (65.59%), Postives = 73/93 (78.49%), Query Frame = -1 Query: 515 QTSFNEPRLLIXTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 793 Q +F EPRLL+ TDP TDHQPI EA+ NIP IAF +TDSP+RY+DI IP NNK HSIG ++WLLAR VL++RGTI +W V+VDLFFYR Sbjct: 113 QPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSPHSIGLMWWLLAREVLRLRGTISRTTEWPVVVDLFFYR 205
BLAST of CF836186 vs. ExPASy Swiss-Prot
Match: RSSA_POSPM (40S ribosomal protein S0 OS=Postia placenta (strain ATCC 44394 / Madison 698-R) GN=RPS0 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 7.659e-30 Identity = 59/92 (64.13%), Postives = 75/92 (81.52%), Query Frame = -1 Query: 515 SFNEPRLLIXTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI-RPGHKWDVMVDLFFYR 787 SF EPRL++ TDPR DHQ I+EA+ NIP IAFCDTD+P+++VD+ IP NNK +HSIG ++WLLAR VL++RGTI R W+VMVD+FFYR Sbjct: 116 SFKEPRLIVVTDPRVDHQAIREASYVNIPVIAFCDTDAPLKFVDVAIPTNNKSRHSIGLMWWLLAREVLRLRGTIPRTTDGWNVMVDMFFYR 207
BLAST of CF836186 vs. ExPASy Swiss-Prot
Match: RSSA_MACHI (40S ribosomal protein SA OS=Maconellicoccus hirsutus PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 7.659e-30 Identity = 61/93 (65.59%), Postives = 72/93 (77.42%), Query Frame = -1 Query: 515 QTSFNEPRLLIXTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 793 Q +F EPRLL+ TDP D QPI EA+ NIP IAFC+TDSP+RYVDI IP N K HSIG ++WLLAR VL++RG+I KWDV+VDLFFYR Sbjct: 113 QAAFREPRLLVVTDPAEDKQPITEASYVNIPVIAFCNTDSPLRYVDIAIPCNTKSAHSIGLMWWLLAREVLRLRGSIPRDGKWDVVVDLFFYR 205
BLAST of CF836186 vs. ExPASy Swiss-Prot
Match: RSSA_AJEDS (40S ribosomal protein S0 OS=Ajellomyces dermatitidis (strain SLH14081) GN=RPS0 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 7.659e-30 Identity = 60/92 (65.22%), Postives = 74/92 (80.43%), Query Frame = -1 Query: 515 SFNEPRLLIXTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYR 787 SF EPRL+I TDPRTDHQ IKEA+ NIP IA CDTDSP +VD+ IP NNKG+H+IG ++W+LAR VL++RGTI +WDV+VDL+FYR Sbjct: 117 SFKEPRLIIVTDPRTDHQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHAIGLIWWMLAREVLRLRGTIASRETEWDVVVDLYFYR 208
BLAST of CF836186 vs. ExPASy Swiss-Prot
Match: RSSA_AJEDR (40S ribosomal protein S0 OS=Ajellomyces dermatitidis (strain ER-3) GN=RPS0 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 7.659e-30 Identity = 60/92 (65.22%), Postives = 74/92 (80.43%), Query Frame = -1 Query: 515 SFNEPRLLIXTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYR 787 SF EPRL+I TDPRTDHQ IKEA+ NIP IA CDTDSP +VD+ IP NNKG+H+IG ++W+LAR VL++RGTI +WDV+VDL+FYR Sbjct: 117 SFKEPRLIIVTDPRTDHQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHAIGLIWWMLAREVLRLRGTIASRETEWDVVVDLYFYR 208
BLAST of CF836186 vs. ExPASy Swiss-Prot
Match: RSSA_NEUCR (40S ribosomal protein S0 OS=Neurospora crassa GN=rps-0 PE=3 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 1.306e-29 Identity = 61/92 (66.30%), Postives = 72/92 (78.26%), Query Frame = -1 Query: 515 SFNEPRLLIXTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI-RPGHKWDVMVDLFFYR 787 SF EPRL+I TDPRTD Q IKEA+ NIP IA CD DSP YVD+ IP NNKG+H+IGC++W+LAR VL++RGTI WDVMVDL+FYR Sbjct: 117 SFKEPRLIIVTDPRTDAQAIKEASYVNIPVIALCDADSPTEYVDVAIPTNNKGRHAIGCVWWMLAREVLRLRGTIYNRETPWDVMVDLYFYR 208
BLAST of CF836186 vs. ExPASy Swiss-Prot
Match: RSSA_DROPS (40S ribosomal protein SA OS=Drosophila pseudoobscura pseudoobscura GN=sta PE=3 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 1.306e-29 Identity = 60/93 (64.52%), Postives = 73/93 (78.49%), Query Frame = -1 Query: 515 QTSFNEPRLLIXTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 793 Q +F EPRLL+ TDP TDHQPI EA+ NIP IAF +TDSP+RY+DI IP NNK HSIG ++WLLAR VL++RGTI +W V+VDL+FYR Sbjct: 113 QPAFREPRLLVVTDPMTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRTVEWPVVVDLYFYR 205
BLAST of CF836186 vs. ExPASy Swiss-Prot
Match: RSSA_DROPE (40S ribosomal protein SA OS=Drosophila persimilis GN=sta PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.306e-29 Identity = 60/93 (64.52%), Postives = 73/93 (78.49%), Query Frame = -1 Query: 515 QTSFNEPRLLIXTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 793 Q +F EPRLL+ TDP TDHQPI EA+ NIP IAF +TDSP+RY+DI IP NNK HSIG ++WLLAR VL++RGTI +W V+VDL+FYR Sbjct: 113 QPAFREPRLLVVTDPMTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRTVEWPVVVDLYFYR 205 The following BLAST results are available for this feature:
BLAST of CF836186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 192
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF836186 ID=CF836186; Name=CF836186; organism=Citrus sinensis; type=EST; length=793bpback to top |