CF836186
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF836186 vs. ExPASy Swiss-Prot
Match: RSSA_ASPFU (40S ribosomal protein S0 OS=Aspergillus fumigatus GN=rps0 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.484e-29 Identity = 72/158 (45.57%), Postives = 91/158 (57.59%), Query Frame = -1 Query: 317 SFNEPRLLIXTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYRXXXXXXXXXXXXXXAIDYATAEYNTNLTSGDQWPSQIADGGWAGGEVQKPIPGVPYFPEAPAATVP 787 SF EPRL+I TDPRTD Q IKEA+ NIP IA CDTDSP +VD+ IP NNKG+H+IG ++WLLAR VL++RGT+ +WDV+VDL+FYR AE N + + P G G V+ G + +AP A VP Sbjct: 117 SFKEPRLIIVTDPRTDAQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHAIGLIWWLLAREVLRLRGTLATRETEWDVVVDLYFYRD-----------------PEAEENKEIADEAKVPGAEEIG---AGAVESGFAGENWDTQAPGAGVP 254
BLAST of CF836186 vs. ExPASy Swiss-Prot
Match: RSSA_ASPFC (40S ribosomal protein S0 OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 / FGSC A1163) GN=rps0 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.484e-29 Identity = 72/158 (45.57%), Postives = 91/158 (57.59%), Query Frame = -1 Query: 317 SFNEPRLLIXTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYRXXXXXXXXXXXXXXAIDYATAEYNTNLTSGDQWPSQIADGGWAGGEVQKPIPGVPYFPEAPAATVP 787 SF EPRL+I TDPRTD Q IKEA+ NIP IA CDTDSP +VD+ IP NNKG+H+IG ++WLLAR VL++RGT+ +WDV+VDL+FYR AE N + + P G G V+ G + +AP A VP Sbjct: 117 SFKEPRLIIVTDPRTDAQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHAIGLIWWLLAREVLRLRGTLATRETEWDVVVDLYFYRD-----------------PEAEENKEIADEAKVPGAEEIG---AGAVESGFAGENWDTQAPGAGVP 254
BLAST of CF836186 vs. ExPASy Swiss-Prot
Match: RSSA_AEDAE (40S ribosomal protein SA OS=Aedes aegypti GN=AAEL008083 PE=2 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 6.484e-29 Identity = 60/93 (64.52%), Postives = 72/93 (77.42%), Query Frame = -1 Query: 515 QTSFNEPRLLIXTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 793 Q +F EPRLLI TDP TDHQP+ EA+ NIP IAFC+TDSP+++VDI IP NNK HSIG ++WLLAR VL++RG I KWD+ DLFFYR Sbjct: 113 QPAFREPRLLIVTDPLTDHQPVTEASYVNIPVIAFCNTDSPLKFVDIAIPCNNKSPHSIGLMWWLLAREVLRLRGKI-THDKWDIKPDLFFYR 204
BLAST of CF836186 vs. ExPASy Swiss-Prot
Match: RSSA_PNECA (40S ribosomal protein S0 OS=Pneumocystis carinii GN=RPS0 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 8.468e-29 Identity = 58/92 (63.04%), Postives = 74/92 (80.43%), Query Frame = -1 Query: 515 SFNEPRLLIXTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI-RPGHKWDVMVDLFFYR 787 S+ EPRL+I TDPRTD Q IKEA+ NIP IA CDTDSP++YVD+ IP NNKG+HSIG ++W+LAR VL++RGT+ +W +MVDL+FYR Sbjct: 113 SYKEPRLIIVTDPRTDSQAIKEASYVNIPVIALCDTDSPLQYVDVAIPTNNKGRHSIGLIWWMLAREVLRLRGTLANRDVEWGIMVDLYFYR 204
BLAST of CF836186 vs. ExPASy Swiss-Prot
Match: RSSA_CHAGB (40S ribosomal protein S0 OS=Chaetomium globosum GN=RPS0 PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 8.468e-29 Identity = 61/92 (66.30%), Postives = 71/92 (77.17%), Query Frame = -1 Query: 515 SFNEPRLLIXTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI-RPGHKWDVMVDLFFYR 787 SF EPRL+I TDPRTD Q IKEA+ NIP IA CDTDSP YVD+ IP NNKG+HSIG ++W+LAR VL++RGTI WDVM DL+FYR Sbjct: 117 SFKEPRLIIVTDPRTDSQAIKEASYVNIPVIALCDTDSPTEYVDVAIPTNNKGRHSIGLVWWMLAREVLRLRGTIYNRETPWDVMPDLYFYR 208
BLAST of CF836186 vs. ExPASy Swiss-Prot
Match: RSSA_ORNPR (40S ribosomal protein SA OS=Ornithodoros parkeri PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.106e-28 Identity = 57/93 (61.29%), Postives = 71/93 (76.34%), Query Frame = -1 Query: 515 QTSFNEPRLLIXTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 793 Q +F EPRLL+ DPR DHQP+ EA+ NIP IAFC+TD+ +RYVD+ IP NNK +HSIG ++W+L R VL+MRG+I WD MVDLFFYR Sbjct: 113 QAAFREPRLLVVCDPREDHQPVTEASYVNIPVIAFCNTDACLRYVDVAIPCNNKAQHSIGLMWWMLTREVLRMRGSIIREIPWDTMVDLFFYR 205
BLAST of CF836186 vs. ExPASy Swiss-Prot
Match: RSSA_COPC7 (40S ribosomal protein S0 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=RPS0 PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.106e-28 Identity = 58/92 (63.04%), Postives = 74/92 (80.43%), Query Frame = -1 Query: 515 SFNEPRLLIXTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI-RPGHKWDVMVDLFFYR 787 SF EPR++I TDPR DHQ I+EA+ NIP IA CDTD+P+++VD+ IP NNK +HSIG ++WLLAR VL++RGTI R W+VMVD+FFYR Sbjct: 116 SFKEPRIIIVTDPRVDHQAIREASYVNIPVIALCDTDAPLQFVDVAIPTNNKTRHSIGLIWWLLAREVLRLRGTIPRTPDGWNVMVDMFFYR 207
BLAST of CF836186 vs. ExPASy Swiss-Prot
Match: RSSA_TALSN (40S ribosomal protein S0 OS=Talaromyces stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 / NRRL 1006) GN=rps0 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.444e-28 Identity = 59/92 (64.13%), Postives = 73/92 (79.35%), Query Frame = -1 Query: 515 SFNEPRLLIXTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYR 787 SF EPRL+I TDPRTD Q IKEA+ NIP IA CDTDSP +VD+ IP NNKG+H+IG ++WLLAR VL++RGT+ +WDV+VDL+FYR Sbjct: 117 SFKEPRLIIVTDPRTDAQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHAIGLVWWLLAREVLRLRGTLATRETEWDVVVDLYFYR 208
BLAST of CF836186 vs. ExPASy Swiss-Prot
Match: RSSA_PENMQ (40S ribosomal protein S0 OS=Penicillium marneffei (strain ATCC 18224 / CBS 334.59 / QM 7333) GN=rps0 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.444e-28 Identity = 59/92 (64.13%), Postives = 73/92 (79.35%), Query Frame = -1 Query: 515 SFNEPRLLIXTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYR 787 SF EPRL+I TDPRTD Q IKEA+ NIP IA CDTDSP +VD+ IP NNKG+H+IG ++WLLAR VL++RGT+ +WDV+VDL+FYR Sbjct: 117 SFKEPRLIIVTDPRTDAQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHAIGLVWWLLAREVLRLRGTLATRETEWDVVVDLYFYR 208
BLAST of CF836186 vs. ExPASy Swiss-Prot
Match: RSSA_PARBP (40S ribosomal protein S0 OS=Paracoccidioides brasiliensis (strain Pb03) GN=RPS0 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.444e-28 Identity = 71/149 (47.65%), Postives = 90/149 (60.40%), Query Frame = -1 Query: 356 SFNEPRLLIXTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI-RPGHKWDVMVDLFFYR---XXXXXXXXXXXXXXAIDYATAEYNTNLTSGDQWPSQIADGGWAGGEVQ-KPIPG 787 SF EPRL+I TDPRTD Q IKEA+ NIP IA CDTDSP +VD+ IP NNKG+H+IG ++W+LAR VL++RGT+ +WDV+VDL+FYR A + A + L GD W +Q G AG V +PG Sbjct: 117 SFKEPRLIIVTDPRTDSQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHAIGLIWWMLAREVLRLRGTLANRESEWDVVVDLYFYRDPEAEENKEIEETKVPGAEEVGAAAIESGLV-GDSWQAQATPGFSAGVAVPGTAVPG 264 The following BLAST results are available for this feature:
BLAST of CF836186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 192
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836186 ID=CF836186; Name=CF836186; organism=Citrus sinensis; type=EST; length=793bpback to top |