CF836186
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF836186 vs. ExPASy Swiss-Prot
Match: RSSA_PARBD (40S ribosomal protein S0 OS=Paracoccidioides brasiliensis (strain Pb18) GN=RPS0 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.444e-28 Identity = 71/149 (47.65%), Postives = 90/149 (60.40%), Query Frame = -1 Query: 356 SFNEPRLLIXTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYR---XXXXXXXXXXXXXXAIDYATAEYNTNLTSGDQWPSQIADGGWAGGEVQ-KPIPG 787 SF EPRL+I TDPRTD Q IKEA+ NIP IA CDTDSP +VD+ IP NNKG+H+IG ++W+LAR VL++RGT+ +WDV+VDL+FYR A + A + L GD W +Q G AG V +PG Sbjct: 117 SFKEPRLIIVTDPRTDSQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHAIGLIWWMLAREVLRLRGTLANRETEWDVVVDLYFYRDPEAEENKEIEETKVPGAEEVGAAAIESGLV-GDSWQAQATPGFSAGVAVPGTAVPG 264
BLAST of CF836186 vs. ExPASy Swiss-Prot
Match: RSSA_NANOT (40S ribosomal protein S0 OS=Nannizzia otae (strain CBS 113480) GN=RPS0 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.444e-28 Identity = 73/173 (42.20%), Postives = 95/173 (54.91%), Query Frame = -1 Query: 317 SFNEPRLLIXTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYRXXXXXXXXXXXXXXAIDYATAEYNTNLTSGDQWPS-----------QIADGGW----AGGEVQKPIPGVPYFPEAPAATVP 787 SF EPRL++ TDPRTD Q IKEA+ NIP IA CD DSP +VD+ IP NNKG+H+IG ++W+LAR VL++RGT+ +WD++VDL+FYR A + A +T L D W + A G W A P G + +APAAT P Sbjct: 117 SFKEPRLIVVTDPRTDAQAIKEASYVNIPVIALCDADSPTEFVDVAIPTNNKGRHAIGLVWWMLAREVLRLRGTLASRETEWDIVVDLYFYRDPEAEETKEIEEAKAAEAEEAAPDT-LNPADNWDAAGAVAPATFGGTPAAGNWEASGADWATAAPAGGESWAADAPAATEP 288
BLAST of CF836186 vs. ExPASy Swiss-Prot
Match: RSSA_COCP7 (40S ribosomal protein S0 OS=Coccidioides posadasii (strain C735) GN=RPS0 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.444e-28 Identity = 59/92 (64.13%), Postives = 73/92 (79.35%), Query Frame = -1 Query: 515 SFNEPRLLIXTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYR 787 SF EPRL+I TDPRTD Q IKEA+ NIP IA CDTDSP +VD+ IP NNKG+H+IG ++WLLAR VL++RGT+ +WDV+VDL+FYR Sbjct: 117 SFKEPRLIIVTDPRTDSQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHAIGLVWWLLAREVLRLRGTLANRETEWDVVVDLYFYR 208
BLAST of CF836186 vs. ExPASy Swiss-Prot
Match: RSSA_COCIM (40S ribosomal protein S0 OS=Coccidioides immitis GN=RPS0 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.444e-28 Identity = 59/92 (64.13%), Postives = 73/92 (79.35%), Query Frame = -1 Query: 515 SFNEPRLLIXTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYR 787 SF EPRL+I TDPRTD Q IKEA+ NIP IA CDTDSP +VD+ IP NNKG+H+IG ++WLLAR VL++RGT+ +WDV+VDL+FYR Sbjct: 117 SFKEPRLIIVTDPRTDSQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHAIGLVWWLLAREVLRLRGTLANRETEWDVVVDLYFYR 208
BLAST of CF836186 vs. ExPASy Swiss-Prot
Match: RSSA_ASPCL (40S ribosomal protein S0 OS=Aspergillus clavatus GN=rps0 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.444e-28 Identity = 72/158 (45.57%), Postives = 91/158 (57.59%), Query Frame = -1 Query: 317 SFNEPRLLIXTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYRXXXXXXXXXXXXXXAIDYATAEYNTNLTSGDQWPSQIADGGWAGGEVQKPIPGVPYFPEAPAATVP 787 SF EPRL+I TDPRTD Q IKEA+ NIP IA CDTDSP +VD+ IP NNKG+H+IG ++WLLAR VL++RGT+ +WDV+VDL+FYR AE N + + P G G V+ G + +AP A VP Sbjct: 117 SFKEPRLIIVTDPRTDAQAIKEASYVNIPVIALCDTDSPTDFVDVAIPTNNKGRHAIGLVWWLLAREVLRLRGTLANRETEWDVVVDLYFYRD-----------------PEAEENKEIAEETKVPGAEEIG---AGAVESGFAGENWDTQAPGAGVP 254
BLAST of CF836186 vs. ExPASy Swiss-Prot
Match: RSSA_SCLS1 (40S ribosomal protein S0 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=rps0 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.887e-28 Identity = 59/92 (64.13%), Postives = 72/92 (78.26%), Query Frame = -1 Query: 515 SFNEPRLLIXTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYR 787 SF EPRL+I TDPRTD Q IKEA+ NIP IA CDTDSP +VD+ IP NNKG+HSIG ++W+LAR VL++RG+I +WD MVDL+FYR Sbjct: 117 SFKEPRLIIVTDPRTDAQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHSIGLVWWMLAREVLRLRGSIASREAEWDTMVDLYFYR 208
BLAST of CF836186 vs. ExPASy Swiss-Prot
Match: RSSA_PARBA (40S ribosomal protein S0 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=RPS0 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.887e-28 Identity = 58/92 (63.04%), Postives = 73/92 (79.35%), Query Frame = -1 Query: 515 SFNEPRLLIXTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYR 787 SF EPRL+I TDPRTD Q IKEA+ NIP IA CDTDSP +VD+ IP NNKG+H+IG ++W+LAR VL++RGT+ +WDV+VDL+FYR Sbjct: 117 SFKEPRLIIVTDPRTDSQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHAIGLIWWMLAREVLRLRGTLANRETEWDVVVDLYFYR 208
BLAST of CF836186 vs. ExPASy Swiss-Prot
Match: RSSA_MALGO (40S ribosomal protein S0 OS=Malassezia globosa (strain ATCC 96807 / CBS 7966) GN=RPS0 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.887e-28 Identity = 57/92 (61.96%), Postives = 73/92 (79.35%), Query Frame = -1 Query: 515 SFNEPRLLIXTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI-RPGHKWDVMVDLFFYR 787 SF EPR+++ TDPR DHQ I+E+A NIP IA CDTD+P+R+VDI IP NNKG+HSIG L+WLL R L++RG + R + W+VMVD+FFYR Sbjct: 116 SFKEPRVIVVTDPRVDHQAIRESAYVNIPVIALCDTDAPLRHVDIAIPGNNKGRHSIGLLWWLLCREFLRLRGIVPRTPNGWNVMVDMFFYR 207
BLAST of CF836186 vs. ExPASy Swiss-Prot
Match: RSSA_BOTFB (40S ribosomal protein S0 OS=Botryotinia fuckeliana (strain B05.10) GN=rps0 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.887e-28 Identity = 59/92 (64.13%), Postives = 72/92 (78.26%), Query Frame = -1 Query: 515 SFNEPRLLIXTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYR 787 SF EPRL+I TDPRTD Q IKEA+ NIP IA CDTDSP +VD+ IP NNKG+HSIG ++W+LAR VL++RG+I +WD MVDL+FYR Sbjct: 117 SFKEPRLIIVTDPRTDAQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHSIGLVWWMLAREVLRLRGSIASREAEWDTMVDLYFYR 208
BLAST of CF836186 vs. ExPASy Swiss-Prot
Match: RSSA_BOMMO (40S ribosomal protein SA OS=Bombyx mori PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.464e-28 Identity = 57/93 (61.29%), Postives = 70/93 (75.27%), Query Frame = -1 Query: 515 QTSFNEPRLLIXTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 793 Q +F EPRLLI DP DHQPI EA+ NIP IA C+TDSP+R+VDI IP N K HSIG ++WLLAR VL++RG + +WDV+V+LFFYR Sbjct: 113 QAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVELFFYR 205 The following BLAST results are available for this feature:
BLAST of CF836186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 192
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836186 ID=CF836186; Name=CF836186; organism=Citrus sinensis; type=EST; length=793bpback to top |