CF836187
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836187 vs. ExPASy Swiss-Prot
Match: RSSA_PICPG (40S ribosomal protein S0 OS=Pichia pastoris (strain GS115) GN=RPS0 PE=3 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 2.858e-60 Identity = 111/201 (55.22%), Postives = 143/201 (71.14%), Query Frame = 3 Query: 90 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI-RPGHKWDVMVDLFFY 689 P D +++LAA VHLG KNC E YV+K R DG+ +IN+GKTWEK+ +AAR+I AI NP D++ S+R +GQRAVLKFA +T+ AIAGR TPG+FTN + F EPRL+I+TDPRTD Q IKE++ NIP IA D DSP +VD+ IP NNKGKHSIG +++LL+R VL++RG + W VM DL+FY Sbjct: 4 PASFDLTAEDAKLLLAANVHLGAKNCQVHNEPYVYKTRPDGVNVINIGKTWEKIVLAARIIAAIPNPEDVVAVSSRTFGQRAVLKFASHTNGSAIAGRFTPGSFTNYITREFKEPRLIIVTDPRTDSQAIKESSYVNIPIIALTDMDSPSEFVDVAIPCNNKGKHSIGLIWYLLSREVLRLRGVLPNRTEAWSVMPDLYFY 204
BLAST of CF836187 vs. ExPASy Swiss-Prot
Match: RSSA_CLAL4 (40S ribosomal protein S0 OS=Clavispora lusitaniae (strain ATCC 42720) GN=RPS0 PE=3 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 2.858e-60 Identity = 114/201 (56.72%), Postives = 143/201 (71.14%), Query Frame = 3 Query: 90 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFY 689 P + D +++LAA VHLG+KN E YV+K R DG+ +IN+ KTWEK+ +AAR+I AI N D++V S+R +GQRAVLKFA +T A IAGR TPG FTN + SF EPRL+I+TDPRTD Q IKE++ NIP IA D DSP YVD+ IP NNKGKHSIG ++WLLAR VL++RG I +W VM DL+FY Sbjct: 4 PESFALTAEDAKLLLAANVHLGSKNVQVHNEPYVYKTRPDGVNVINIAKTWEKIVLAARIIAAIPNASDVVVCSSRTFGQRAVLKFASHTGATPIAGRFTPGNFTNYITRSFKEPRLVIVTDPRTDAQAIKESSYVNIPVIALSDVDSPSEYVDVAIPCNNKGKHSIGLIWWLLAREVLRLRGIIPDREAEWSVMPDLYFY 204
BLAST of CF836187 vs. ExPASy Swiss-Prot
Match: RSSA_MONBE (40S ribosomal protein SA OS=Monosiga brevicollis GN=30792 PE=3 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 3.732e-60 Identity = 107/198 (54.04%), Postives = 147/198 (74.24%), Query Frame = 3 Query: 99 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTH-AHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFY 689 L EADIQ +L A+VHLG NC M +YV+KRR+DG+ +I+L KT+EK+ +AAR+I A+++P ++ S R +GQRA+LKF + A IAGR TPG FTNQ+Q +F EPRLL+LTDP DHQ ++EA+ NIP I+ CD D+P+RYVD+ IP NNK H+IG ++W+LAR VL++RGT+ +WDVM DL+F+ Sbjct: 8 LKPTEADIQKLLMAKVHLGASNCTTAMSKYVYKRRSDGVNVIDLNKTYEKIVLAARIIAAVDSPANVCAISGRNFGQRAILKFCNHIGGAFPIAGRFTPGAFTNQIQKAFQEPRLLVLTDPLVDHQAVREASYVNIPIISLCDVDAPLRYVDVVIPCNNKSPHAIGIVWWMLAREVLRLRGTLPRDAEWDVMPDLYFF 205
BLAST of CF836187 vs. ExPASy Swiss-Prot
Match: RSSA_LODEL (40S ribosomal protein S0 OS=Lodderomyces elongisporus GN=RPS0 PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 4.875e-60 Identity = 115/201 (57.21%), Postives = 143/201 (71.14%), Query Frame = 3 Query: 90 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP-GHKWDVMVDLFFY 689 P D +++LAA VHLG+KN + YV+K R DG+ IIN+GKTWEK+ +AAR+I A+ N D+ V S+R +GQRAVLKFA +T A AIAGR TPG FTN + SF EPRL+I+TDPRTD Q IKE++ NIP IA D DSP YVD+ IP NNKGKHSIG ++WLLAR VL++RG I +W VM DL+FY Sbjct: 4 PASFDLTPEDAKLLLAANVHLGSKNVQVHNKPYVYKTRPDGVNIINIGKTWEKIVLAARIIAAVPNSSDVAVCSSRTFGQRAVLKFAAHTGATAIAGRFTPGNFTNYITRSFKEPRLVIVTDPRTDAQAIKESSYVNIPVIALTDMDSPSEYVDVAIPCNNKGKHSIGLIWWLLAREVLRLRGIIADRTTEWSVMPDLYFY 204
BLAST of CF836187 vs. ExPASy Swiss-Prot
Match: RSSA_PICST (40S ribosomal protein S0 OS=Pichia stipitis GN=RPS0 PE=3 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 8.315e-60 Identity = 112/201 (55.72%), Postives = 143/201 (71.14%), Query Frame = 3 Query: 90 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP-GHKWDVMVDLFFY 689 P D +++LAA VHLG+KN + YV+K R DG+ +IN+GKTWEK+ +AAR+I A+ NP D+ V S+R +GQRAVLKFA +T A IAGR TPG FTN + SF EPRL+++TDPRTD Q IKE++ NIP IA D DSP YVD+ IP NNKGKHSIG ++WL+AR VL++RG I +W VM DL+FY Sbjct: 4 PASFDLTPEDAKLLLAANVHLGSKNVQVHNKPYVYKTRPDGVNVINIGKTWEKIVLAARIIAAVPNPSDVAVCSSRTFGQRAVLKFAAHTGATPIAGRFTPGNFTNYITRSFKEPRLVVVTDPRTDAQAIKESSYVNIPVIALTDMDSPSEYVDVAIPCNNKGKHSIGLIWWLIAREVLRLRGIIPDRTTEWSVMPDLYFY 204
BLAST of CF836187 vs. ExPASy Swiss-Prot
Match: RSSA_CRYHO (40S ribosomal protein SA OS=Cryptosporidium hominis GN=Chro.30246 PE=3 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 1.086e-59 Identity = 110/200 (55.00%), Postives = 145/200 (72.50%), Query Frame = 3 Query: 90 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFY 689 P ++K DI M+ + H+GTKN + +M YV+KR ++GI++INL KTWEK+Q+AAR+I I+N D++V S RPYG R LKFA++T AHA+ GR TPGT TNQ+ F EPRLLI+TDPR D Q + E++ NIP IA CDTDSP++YVD+ IP NNKGK SI +++LLAR V +RG KWDVMVD+FF+ Sbjct: 2 PPAETRKLDDIAKMIVCKTHIGTKNVEDKMLSYVYKRTHEGIFLINLAKTWEKIQIAARIIATIDNLADVVVVSQRPYGSRPALKFAQHTGAHAMVGRFTPGTLTNQITQKFMEPRLLIVTDPRVDSQAVIESSYANIPVIALCDTDSPLQYVDVAIPCNNKGKESIALMYYLLAREVNFLRGKT---DKWDVMVDVFFW 198
BLAST of CF836187 vs. ExPASy Swiss-Prot
Match: RSSA_CANGA (40S ribosomal protein S0 OS=Candida glabrata GN=RPS0 PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.852e-59 Identity = 111/192 (57.81%), Postives = 140/192 (72.92%), Query Frame = 3 Query: 117 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP-GHKWDVMVDLFFY 689 D Q++LAA HLG +N E YVF R DG+++IN+GKTWEKL +AAR+I AI NP D++ S+R YGQRAVLKFA +T A IAGR TPG+FTN + SF EPRL+I+TDPR+D Q IKEA+ NIP IA D DSP YVD+ IP NN+GKHSIG +++LLAR VL++RG + W +M DL+FY Sbjct: 13 DAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIPNPEDVVAISSRTYGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSDAQAIKEASYVNIPVIALTDLDSPSEYVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALTDRTQPWSIMPDLYFY 204
BLAST of CF836187 vs. ExPASy Swiss-Prot
Match: RSSA_CANAW (40S ribosomal protein S0 OS=Candida albicans (strain WO-1) GN=RPS0 PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.852e-59 Identity = 114/201 (56.72%), Postives = 142/201 (70.65%), Query Frame = 3 Query: 90 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP-GHKWDVMVDLFFY 689 P D +++LAA VHLG KN + YV+K R DG+ IIN+GKTWEK+ +AAR+I A+ N D+ V S+R +GQRAVLKFA +T A AIAGR TPG FTN + SF EPRL+++TDPRTD Q IKE++ NIP IA D DSP YVD+ IP NNKGKHSIG ++WLLAR VL++RG I +W VM DL+FY Sbjct: 4 PASFDLTPEDAKLLLAANVHLGAKNVQVHNKPYVYKTRPDGMNIINIGKTWEKIVLAARIIAAVPNASDVAVCSSRTFGQRAVLKFAAHTGATAIAGRFTPGNFTNYITRSFKEPRLVVVTDPRTDAQAIKESSYVNIPVIALTDMDSPSEYVDVAIPCNNKGKHSIGLIWWLLAREVLRLRGIIPDRTTEWSVMPDLYFY 204
BLAST of CF836187 vs. ExPASy Swiss-Prot
Match: RSSA_CANAL (40S ribosomal protein S0 OS=Candida albicans GN=RPS0 PE=2 SV=2) HSP 1 Score: 229.18 bits (583), Expect = 1.852e-59 Identity = 114/201 (56.72%), Postives = 142/201 (70.65%), Query Frame = 3 Query: 90 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP-GHKWDVMVDLFFY 689 P D +++LAA VHLG KN + YV+K R DG+ IIN+GKTWEK+ +AAR+I A+ N D+ V S+R +GQRAVLKFA +T A AIAGR TPG FTN + SF EPRL+++TDPRTD Q IKE++ NIP IA D DSP YVD+ IP NNKGKHSIG ++WLLAR VL++RG I +W VM DL+FY Sbjct: 4 PASFDLTPEDAKLLLAANVHLGAKNVQVHNKPYVYKTRPDGMNIINIGKTWEKIVLAARIIAAVPNASDVAVCSSRTFGQRAVLKFAAHTGATAIAGRFTPGNFTNYITRSFKEPRLVVVTDPRTDAQAIKESSYVNIPVIALTDMDSPSEYVDVAIPCNNKGKHSIGLIWWLLAREVLRLRGIIPDRTTEWSVMPDLYFY 204
BLAST of CF836187 vs. ExPASy Swiss-Prot
Match: RSSA_CANDC (40S ribosomal protein S0 OS=Candida dubliniensis (strain CD36 / CBS 7987 / NCPF 3949 / NRRL Y-17841) GN=RPS0 PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.419e-59 Identity = 114/201 (56.72%), Postives = 142/201 (70.65%), Query Frame = 3 Query: 90 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP-GHKWDVMVDLFFY 689 P D +++LAA VHLG KN + YV+K R DG+ IIN+GKTWEK+ +AAR+I A+ N D+ V S+R +GQRAVLKFA +T A AIAGR TPG FTN + SF EPRL+I+TDPRTD Q IKE++ NIP IA D DSP YVD+ IP NNKGKHSIG ++WL+AR VL++RG I +W VM DL+FY Sbjct: 4 PASFDLTPEDAKLLLAANVHLGAKNVQVHNKPYVYKTRPDGMNIINIGKTWEKIVLAARIIAAVPNASDVAVCSSRTFGQRAVLKFAAHTGATAIAGRFTPGNFTNYITRSFKEPRLVIVTDPRTDAQAIKESSYVNIPVIALTDMDSPSEYVDVAIPCNNKGKHSIGLIWWLIAREVLRLRGIIPDRTTEWSVMPDLYFY 204 The following BLAST results are available for this feature:
BLAST of CF836187 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836187 ID=CF836187; Name=CF836187; organism=Citrus sinensis; type=EST; length=745bpback to top |