CF836187
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836187 vs. ExPASy Swiss-Prot
Match: RSSA_ZYGRC (40S ribosomal protein S0 OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / IFO 1130 / NBRC 1623 / NCYC 568) GN=RPS0 PE=3 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 2.675e-58 Identity = 110/192 (57.29%), Postives = 140/192 (72.92%), Query Frame = 3 Query: 117 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPGHKWDVMVDLFFY 689 D Q++LAA HLG +N E YVFK R DG+ ++++GKTWEKL +AAR+I AI NP DI+ S+R +GQRAVLKF+ +T A IAGR TPG+FTN + SF EPRL+I+TDPR+D Q IKEA+ NIP IA D DSP YVD+ IP NN+GKHSIG +++LLAR VL++RG + W VM DL+FY Sbjct: 13 DAQLLLAANTHLGARNVQVHQEPYVFKTRPDGVNVVDVGKTWEKLVLAARIIAAIPNPEDIVAISSRTFGQRAVLKFSAHTGATPIAGRFTPGSFTNYITRSFKEPRLIIVTDPRSDAQAIKEASYVNIPVIALTDLDSPSEYVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWSVMPDLYFY 204
BLAST of CF836187 vs. ExPASy Swiss-Prot
Match: RSSA_LEIIN (40S ribosomal protein SA OS=Leishmania infantum GN=LinJ36.5570 PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 4.563e-58 Identity = 108/206 (52.43%), Postives = 144/206 (69.90%), Query Frame = 3 Query: 72 TGTATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFY 689 T + + L KE+D Q +LA H+GT+N M++Y++ R +G +II+L WEKL +AARVI A+ENP D+ V S+R YG RA+ KF+++ GR PGTFTNQ+Q F +PR+L++TDPRTDHQ I+EA+L NIP IA CDTD+P+ YVDI IP NN+G SIG ++WLLAR VL++RGTI W+ VDLFFY Sbjct: 2 TAVESGSKVLRMKESDAQKLLAMRCHIGTRNQSSAMKKYIYGRTAEGSHIIDLHMMWEKLILAARVIAAVENPKDVCVCSSRLYGTRAIYKFSQHVGTSFHGGRFIPGTFTNQIQKKFVQPRVLVVTDPRTDHQAIREASLVNIPVIALCDTDAPLEYVDIAIPCNNRGIKSIGMMYWLLAREVLRLRGTIVRSVPWEEKVDLFFY 207
BLAST of CF836187 vs. ExPASy Swiss-Prot
Match: RSSA_ASHGO (40S ribosomal protein S0 OS=Ashbya gossypii GN=RPS0 PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 5.959e-58 Identity = 109/192 (56.77%), Postives = 142/192 (73.96%), Query Frame = 3 Query: 117 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPGHKWDVMVDLFFY 689 D Q++LAA VHLG+KN E Y++K R DG+ II++GKTWEK+ +AAR+I AI N D++ S+R YGQRAVLKF+ +T A AIAGR TPG+FTN + SF EPRL+I+TDPR+D Q IKEA+ NIP IA D +SP YVD+ IP NN+GKHSIG +++LLAR VL++RG + W +M DL+FY Sbjct: 13 DAQLLLAANVHLGSKNVQVHQEPYLYKTRPDGVNIIHIGKTWEKIVLAARIIAAIPNAEDVVAISSRTYGQRAVLKFSAHTGATAIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSDAQAIKEASYVNIPVIALTDLESPSEYVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWSIMPDLYFY 204
BLAST of CF836187 vs. ExPASy Swiss-Prot
Match: RSSA_CAEBR (40S ribosomal protein SA OS=Caenorhabditis briggsae GN=rps-0 PE=3 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 7.783e-58 Identity = 107/198 (54.04%), Postives = 147/198 (74.24%), Query Frame = 3 Query: 111 EADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI--RPGHKWD---VMVDLFFY 689 E D+ +LA + HLG+ N +FQM++YV+KRR DG IIN+ KTWEKL +AAR I A+ENP D++V SARPY QRA+LKFA +T A AI GR +PG TNQ+Q +F EPRLL+++DPR DHQ + EA+ +P I+F +T+SP++ +DIG+P NNKG+ SIG ++W+LAR +L +RG I + G D +M DL+FY Sbjct: 12 EEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLLAARAIAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKEPRLLVISDPRIDHQAVTEASYVGVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAREILILRGKISRQTGFVLDGKEIMPDLYFY 209
BLAST of CF836187 vs. ExPASy Swiss-Prot
Match: RSSA2_VANPO (40S ribosomal protein S0-B OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=RPS0B PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 1.016e-57 Identity = 109/192 (56.77%), Postives = 138/192 (71.88%), Query Frame = 3 Query: 117 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPGHKWDVMVDLFFY 689 D Q++LAA HLG +N E YVF R DG+ +IN+GKTWEK+ +AAR+I AI NP D+ S+R YGQRAVLKF+ +T A IAGR TPG+FTN + SF EPRL+I+TDPR+D Q IKEA+ NIP IA D DSP YVD+ IP NN+GKHSIG +++LLAR VL++RG + W +M DL+FY Sbjct: 13 DAQLLLAANTHLGARNVQVHQEPYVFNTRPDGVNVINVGKTWEKIVLAARIIAAIPNPEDVCAISSRTYGQRAVLKFSAHTGATPIAGRFTPGSFTNYITRSFKEPRLIIVTDPRSDFQAIKEASYVNIPVIALTDLDSPSEYVDVAIPCNNRGKHSIGLVWYLLAREVLRLRGALVDRTQPWAIMPDLYFY 204
BLAST of CF836187 vs. ExPASy Swiss-Prot
Match: RSSA1_VANPO (40S ribosomal protein S0-A OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=RPS0A PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 1.016e-57 Identity = 109/192 (56.77%), Postives = 138/192 (71.88%), Query Frame = 3 Query: 117 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPGHKWDVMVDLFFY 689 D Q++LAA HLG +N E YVF R DG+ +IN+GKTWEK+ +AAR+I AI NP D+ S+R YGQRAVLKF+ +T A IAGR TPG+FTN + SF EPRL+I+TDPR+D Q IKEA+ NIP IA D DSP YVD+ IP NN+GKHSIG +++LLAR VL++RG + W +M DL+FY Sbjct: 13 DAQLLLAANTHLGARNVQVHQEPYVFNTRPDGVNVINVGKTWEKIVLAARIIAAIPNPEDVCAISSRTYGQRAVLKFSAHTGATPIAGRFTPGSFTNYITRSFKEPRLIIVTDPRSDFQAIKEASYVNIPVIALTDLDSPSEYVDVAIPCNNRGKHSIGLVWYLLAREVLRLRGALVDRTQPWAIMPDLYFY 204
BLAST of CF836187 vs. ExPASy Swiss-Prot
Match: RSSA_CAEEL (40S ribosomal protein SA OS=Caenorhabditis elegans GN=rps-0 PE=1 SV=3) HSP 1 Score: 223.016 bits (567), Expect = 1.328e-57 Identity = 105/198 (53.03%), Postives = 146/198 (73.74%), Query Frame = 3 Query: 111 EADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKW-----DVMVDLFFY 689 E D+ +LA + HLG+ N +FQM++YV+KRR DG IIN+ KTWEKL +AAR I A+ENP D++V SARPY QRA+LKFA +T A AI GR +PG TNQ+Q +F EPRLL+++DPR DHQ + EA+ +P I+F +T+SP++ +DIG+P NNKG+ SIG ++W+LAR +L +RG I + ++M DL+FY Sbjct: 12 EEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLLAARAIAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKEPRLLVISDPRIDHQAVTEASYVGVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAREILILRGKISRQTGFVLEGKEIMPDLYFY 209
BLAST of CF836187 vs. ExPASy Swiss-Prot
Match: RSSA_LEIMA (40S ribosomal protein SA OS=Leishmania major GN=LmjF36.5010 PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.957e-57 Identity = 106/197 (53.81%), Postives = 141/197 (71.57%), Query Frame = 3 Query: 99 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFY 689 L KE+D Q +LA H+GT+N M++Y++ R +G +II++ WEKL +AARVI A+ENP D+ V S+R YG RA+ KF+++ GR PGTFTNQ+Q F +PR+L++TDPRTDHQ I+EA+L NIP IA CDTD+P+ YVDI IP NN+G SIG ++WLLAR VL++RGTI W+ VDLFFY Sbjct: 11 LRMKESDAQKLLAMRCHIGTRNQSSAMKKYIYGRTAEGSHIIDVHMMWEKLILAARVIAAVENPKDVCVCSSRLYGTRAIYKFSQHVGTSFHGGRFIPGTFTNQIQKKFVQPRVLVVTDPRTDHQAIREASLVNIPVIALCDTDAPLEYVDIAIPCNNRGIKSIGMMYWLLAREVLRLRGTIVRSVPWEEKVDLFFY 207
BLAST of CF836187 vs. ExPASy Swiss-Prot
Match: RSSA_LEIBR (40S ribosomal protein SA OS=Leishmania braziliensis GN=LbrM35_V2.5370 PE=3 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 3.863e-57 Identity = 106/206 (51.46%), Postives = 144/206 (69.90%), Query Frame = 3 Query: 72 TGTATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFY 689 T + + L KE+D Q +LA H+GT+N M++Y++ R +G +II++ WEKL +AARVI A+ENP D+ V S+R YG RA+ KF+++ GR PGTFTNQ+Q F +PR+L++TDPRTDHQ I+EA+L NIP IA CDTD+P+ +VDI IP NN+G SIG ++WLLAR VL++RGTI W+ VDLFFY Sbjct: 2 TAVESGSKVLRMKESDAQKLLAMRCHIGTRNQSSAMKKYIYGRTAEGSHIIDVHMLWEKLILAARVIAAVENPKDVCVCSSRLYGTRAIYKFSQHVGTSFHGGRFIPGTFTNQIQKKFMQPRVLVVTDPRTDHQAIREASLVNIPVIALCDTDAPLDFVDIAIPCNNRGIKSIGMMYWLLAREVLRLRGTIVRSVPWEEKVDLFFY 207
BLAST of CF836187 vs. ExPASy Swiss-Prot
Match: RSSA_ECHGR (40S ribosomal protein SA OS=Echinococcus granulosus PE=2 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 1.052e-54 Identity = 102/195 (52.31%), Postives = 140/195 (71.79%), Query Frame = 3 Query: 99 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLF 683 L KE DI++M+AA+VHLG+ N ++QM++YV+ R ++G +II+L KTWEKL +AAR I AIENP D+++ +P QR LKF YT ++ GR TPG FTNQ+Q+ F EPRLLI+ DP+ DHQP++E + NIP I FC+TDSP++ VDIGIP NN K+SI + W+LAR V ++ G DV++DLF Sbjct: 8 LELKEDDIRLMVAAKVHLGSTNANYQMQQYVYDRNDEGNHIIHLNKTWEKLLLAARAICAIENPADVVIIGGQPTWQRGALKFGHYTGTTSVPGRFTPGAFTNQIQSGFKEPRLLIVCDPKGDHQPVREGSAVNIPVIGFCNTDSPLQCVDIGIPCNN-DKYSIALMLWMLAREVRRIWGLDPRSQPGDVIMDLF 201 The following BLAST results are available for this feature:
BLAST of CF836187 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836187 ID=CF836187; Name=CF836187; organism=Citrus sinensis; type=EST; length=745bpback to top |