CF836189

Overview
NameCF836189
Unique NameCF836189
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836189 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.902e-40
Identity = 88/189 (46.56%), Postives = 115/189 (60.85%), Query Frame = 1
Query:  136 LRKVTQNFAQENELGRGGFGTVYKGELEDGTKIAVKRMEAGVTTTKALDEFQSEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPHGALSRHLFQWEKLQLKPLSWTRRLSIALDVARGMEYLHCLARQTFIHRDLKSSNILLDDDFRAKVSDFGLVKL-----APDGEKSVVTRLAGTFGYLAPEY 687
            + K T NF+++N +G GGFG V+K  LEDGT  A+KR  A +  TK  D+  +E+ +L +V HR LV LLG  ++    LL+YE++P+G L  HL        KPL+W RRL IA   A G+ YLH  A+    HRD+KSSNILLD+   AKVSDFGL +L       + E  + T   GT GYL PEY
Sbjct:  356 ITKATNNFSKDNLIGTGGFGEVFKAVLEDGTITAIKR--AKLNNTKGTDQILNEVRILCQVNHRSLVRLLGCCVDLELPLLIYEFIPNGTLFEHLHGSSDRTWKPLTWRRRLQIAYQTAEGLAYLHSAAQPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVDLTETANNESHIFTGAQGTLGYLDPEY 542          
BLAST of CF836189 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 2.902e-40
Identity = 86/204 (42.16%), Postives = 129/204 (63.24%), Query Frame = 1
Query:   82 TENSHVIESGNLVISVQVLRKVTQNFAQENELGRGGFGTVYKGELEDGTKIAVKRMEAGVTTTKALDEFQSEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPHGALSRHLFQWEKLQLKPLSWTRRLSIALDVARGMEYLHCLARQTFIHRDLKSSNILLDDDFRAKVSDFGLVKL-APDGEKSVVTRLAGTFGYLAPEYA 690
            T+   +  +G+L    + +   T  F   N+LG+GGFG VYKG    G ++AVKR+     + +   EF++E+ V++K++HR+LV LLGY +EG E++LVYE++P+ +L   LF  +      L W+RR  I   +ARG+ YLH  +R T IHRDLK+ NILLD D   KV+DFG+ ++   D  ++   R+ GT+GY+APEYA
Sbjct:  319 TDGDDITTAGSLQFDFKAIVAATDIFLPINKLGQGGFGEVYKGTFPSGVQVAVKRLSKN--SGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDYFLF--DPTMQGQLDWSRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFGMDQTEANTRRVVGTYGYMAPEYA 518          
BLAST of CF836189 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 4.950e-40
Identity = 94/220 (42.73%), Postives = 130/220 (59.09%), Query Frame = 1
Query:   55 SSGSTNSGATENSHVIESGNLVISVQVLRKVTQNFAQENELGRGGFGTVYKGELEDGTKIAVKRMEAGVTTTKALD--------EFQSEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPHGALSRHLFQWEKLQLKPLSWTRRLSIALDVARGMEYLHCLARQTFIHRDLKSSNILLDDDFRAKVSDFGLVKLAPDGEKSVV-TRLAGTFGYLAPEY 687
            SS S  +  TE   +  +     S   L+  T+NF  ++ +G GGFG V++G L++ T    K     V   K L+        E+ +EI  L ++ H +LV L+GY +E  +RLLVYE+M  G+L  HLF       KPLSW  R+ +ALD A+G+ +LH    +  I+RD+K+SNILLD DF AK+SDFGL +  P GE+S V TR+ GTFGY APEY
Sbjct:   27 SSSSATAHKTEGEILSSTTVKSFSFNELKLATRNFRSDSVVGEGGFGCVFRGWLDETTLTPTKSSSGLVIAVKRLNPDGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEQRLLVYEFMHKGSLENHLFANGNKDFKPLSWILRIKVALDAAKGLAFLHSDPVKV-IYRDIKASNILLDSDFNAKLSDFGLARDGPMGEQSYVSTRVMGTFGYAAPEY 245          
BLAST of CF836189 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 4.950e-40
Identity = 92/202 (45.54%), Postives = 131/202 (64.85%), Query Frame = 1
Query:  103 ESGNLV-ISVQVLRKVTQNFAQENELGRGGFGTVYKGELEDGTKIAVKRMEAGVTTTKALDEFQSEIAVLSKVRHRHLVSLLGYSI-----EGNERLLVYEYMPHGALSRHLFQWEKLQLKPLSWTRRLSIALDVARGMEYLHCLARQTFIHRDLKSSNILLDDDFRAKVSDFGLVKLAPDGEKSVVTRLAGTFGYLAPEYA 690
            ES  LV  S   ++K T NF++ N +GRGG+G V+KG L DGT++A KR +       A   F  E+ V++ +RH +L++L GY       EG++R++V + + +G+L  HLF   + QL   +W  R  IAL +ARG+ YLH  A+ + IHRD+K+SNILLD+ F AKV+DFGL K  P+G   + TR+AGT GY+APEYA
Sbjct:  264 ESTTLVKFSFDEIKKATNNFSRHNIIGRGGYGNVFKGALPDGTQVAFKRFKNCSAGGDA--NFAHEVEVIASIRHVNLLALRGYCTATTPYEGHQRIIVCDLVSNGSLHDHLFGDLEAQL---AWPLRQRIALGMARGLAYLHYGAQPSIIHRDIKASNILLDERFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYA 460          
BLAST of CF836189 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.465e-40
Identity = 85/192 (44.27%), Postives = 129/192 (67.19%), Query Frame = 1
Query:  118 VISVQVLRKVTQNFAQENELGRGGFGTVYKGELEDGTKIAVKRMEAGVTTTKALDEFQSEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPHGALSRHLFQWEKLQLKPLSWTRRLSIALDVARGMEYLHCLARQTFIHRDLKSSNILLDDDFRAKVSDFGLVKLAPDGEKSVVT-RLAGTFGYLAPEYA 690
            +I ++ + K T+NF+  N+LG+GGFG VYKG L DG +IAVKR+    T+ +  DEF +E+ ++++++H +LV +LG  IEG+E++L+YEY+ + +L  +LF   K +   L+W  R  I   VARG+ YLH  +R   IHRDLK SNILLD +   K+SDFG+ ++    E    T ++ GT+GY++PEYA
Sbjct:  515 LIEMETVVKATENFSSCNKLGQGGFGIVYKGRLLDGKEIAVKRLSK--TSVQGTDEFMNEVTLIARLQHINLVQVLGCCIEGDEKMLIYEYLENLSLDSYLFG--KTRRSKLNWNERFDITNGVARGLLYLHQDSRFRIIHRDLKVSNILLDKNMIPKISDFGMARIFERDETEANTMKVVGTYGYMSPEYA 702          
BLAST of CF836189 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 6.465e-40
Identity = 100/233 (42.92%), Postives = 142/233 (60.94%), Query Frame = 1
Query:   22 TARSLSSQTVASSGSTNSGATENSHVIESGNL-VISVQVLRKVTQNFAQENELGRGGFGTVYKGELEDGTKIAVKRMEAGVT---------TTKALDEFQSEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPHGALSRHLFQWEKLQLKPLSWTRRLSIALDVARGMEYLHCLARQTFIHRDLKSSNILLDDDFRAKVSDFGLVKLAPDGEKS-VVTRLAGTFGYLAPEY 687
            T  S+  Q+  S  ST    +++  ++ES NL V +   L+  T+NF  ++ LG+GGFG VY+G + D T +A  R+ +G+          + +   E++SE+  L  + HR+LV LLGY  E  E LLVYE+MP G+L  HLF+    +  P  W  R+ I +  ARG+ +LH L R+  I+RD K+SNILLD ++ AK+SDFGL KL P  EKS V TR+ GT+GY APEY
Sbjct:   41 TNSSVGQQSQFSDISTGI-ISDSGKLLESPNLKVYNFLDLKTATKNFKPDSMLGQGGFGKVYRGWV-DATTLAPSRVGSGMIVAIKRLNSESVQGFAEWRSEVNFLGMLSHRNLVKLLGYCREDKELLLVYEFMPKGSLESHLFR----RNDPFPWDLRIKIVIGAARGLAFLHSLQREV-IYRDFKASNILLDSNYDAKLSDFGLAKLGPADEKSHVTTRIMGTYGYAAPEY 266          
BLAST of CF836189 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.103e-39
Identity = 86/203 (42.36%), Postives = 133/203 (65.52%), Query Frame = 1
Query:   85 ENSHVIESGNLVISVQVLRKVTQNFAQENELGRGGFGTVYKGELEDGTKIAVKRMEAGVTTTKALDEFQSEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPHGALSRHLFQWEKLQLKPLSWTRRLSIALDVARGMEYLHCLARQTFIHRDLKSSNILLDDDFRAKVSDFGLVKLAP-DGEKSVVTRLAGTFGYLAPEYA 690
            E   +  +G+L    +V+   T  F+  N+LG+GGFG VYKG L +G ++AVKR+    T+ +   EF++E+ V++K++HR+LV LLG+ +E  E++LVYE++ + +L   LF   ++Q + L WT R  I   +ARG+ YLH  +R T IHRDLK+ NILLD D   KV+DFG+ ++   D  ++   R+ GT+GY++PEYA
Sbjct:  316 EEDDITTAGSLQFDFKVIEAATDKFSMCNKLGQGGFGQVYKGTLPNGVQVAVKRLSK--TSGQGEKEFKNEVVVVAKLQHRNLVKLLGFCLEREEKILVYEFVSNKSLDYFLFD-SRMQSQ-LDWTTRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFEIDQTEAHTRRVVGTYGYMSPEYA 514          
BLAST of CF836189 vs. ExPASy Swiss-Prot
Match: CRK39_ARATH (Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.103e-39
Identity = 92/212 (43.40%), Postives = 134/212 (63.21%), Query Frame = 1
Query:   55 SSGSTNSGATENSHVIESGNLVISVQVLRKVTQNFAQENELGRGGFGTVYKGELEDGTKIAVKRMEAGVTTTKALDEFQSEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPHGALSRHLFQWEKLQLKPLSWTRRLSIALDVARGMEYLHCLARQTFIHRDLKSSNILLDDDFRAKVSDFGLVKLAPDGEKSVVT-RLAGTFGYLAPEY 687
            S    N G+ E S       L   + ++   T  F+ EN LG+GGFGTVYKG L +G ++AVKR+  G  + +   EF++E+++L++++HR+LV LLG+  EG+E++LVYE++P+ +L   +F  EK  L  L+W  R  I   +ARG+ YLH  ++   IHRDLK+SNILLD +   KV+DFG  +L    E    T R+AGT GY+APEY
Sbjct:  319 SYNKINVGSAEYSDSDGQFMLRFDLGMVLAATDEFSSENTLGQGGFGTVYKGTLLNGQEVAVKRLTKG--SGQGDIEFKNEVSLLTRLQHRNLVKLLGFCNEGDEQILVYEFVPNSSLDHFIFDDEKRSL--LTWEMRYRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEY 526          
BLAST of CF836189 vs. ExPASy Swiss-Prot
Match: CRK30_ARATH (Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana GN=CRK30 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.440e-39
Identity = 84/195 (43.08%), Postives = 129/195 (66.15%), Query Frame = 1
Query:  109 GNLVISVQVLRKVTQNFAQENELGRGGFGTVYKGELEDGTKIAVKRMEAGVTTTKALDEFQSEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPHGALSRHLFQWEKLQLK-PLSWTRRLSIALDVARGMEYLHCLARQTFIHRDLKSSNILLDDDFRAKVSDFGLVKLAPDGEKSVVT-RLAGTFGYLAPEY 687
            G L   ++ +   T NF   N++G+GGFG VYKG L +GT++AVKR+    T+ +   EF++E+ +++K++HR+LV LLG++++G E++LV+E++P+ +L   LF       K  L WTRR +I   + RG+ YLH  +R T IHRD+K+SNILLD D   K++DFG+ +   D +    T R+ GTFGY+ PEY
Sbjct:  330 GYLQFDIKDIEAATSNFLASNKIGQGGFGEVYKGTLSNGTEVAVKRLSR--TSDQGELEFKNEVLLVAKLQHRNLVRLLGFALQGEEKILVFEFVPNKSLDYFLFGSTNPTKKGQLDWTRRYNIIGGITRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNFRDHQTEDSTGRVVGTFGYMPPEY 522          
BLAST of CF836189 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.881e-39
Identity = 90/187 (48.13%), Postives = 119/187 (63.64%), Query Frame = 1
Query:  136 LRKVTQNFAQENELGRGGFGTVYKGELED-GTKIAVKRMEAGVTTTKALDEFQSEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPHGALSRHLFQWEKLQLKPLSWTRRLSIALDVARGMEYLHCLARQTFIHRDLKSSNILLDDDFRAKVSDFGLVKLAPDGEKS-VVTRLAGTFGYLAPEYA 690
            L   T NF  +  LG GGFG VYKG L+  G  +AVK+++      +   EF  E+ +LS + H +LV+L+GY  +G++RLLVYE+MP G+L  HL        + L W  R+ IA   A+G+E+LH  A    I+RD KSSNILLD+ F  K+SDFGL KL P G+KS V TR+ GT+GY APEYA
Sbjct:   79 LAAATMNFHPDTFLGEGGFGRVYKGRLDSTGQVVAVKQLDRN--GLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPP-DKEALDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYA 262          
The following BLAST results are available for this feature:
BLAST of CF836189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
WAKLQ_ARATH2.902e-4046.56Wall-associated receptor kinase-like 20 OS=Arabido... [more]
CRK20_ARATH2.902e-4042.16Putative cysteine-rich receptor-like protein kinas... [more]
Y3545_ARATH4.950e-4042.73Probable receptor-like protein kinase At3g55450 OS... [more]
RKF3_ARATH4.950e-4045.54Probable LRR receptor-like serine/threonine-protei... [more]
SRK6_BRAOE6.465e-4044.27Putative serine/threonine-protein kinase receptor ... [more]
CX32_ARATH6.465e-4042.92Probable serine/threonine-protein kinase Cx32, chl... [more]
CRK5_ARATH1.103e-3942.36Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]
CRK39_ARATH1.103e-3943.40Putative cysteine-rich receptor-like protein kinas... [more]
CRK30_ARATH1.440e-3943.08Putative cysteine-rich receptor-like protein kinas... [more]
PBS1_ARATH1.881e-3948.13Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02J02_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02J02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836189 ID=CF836189; Name=CF836189; organism=Citrus sinensis; type=EST; length=691bp
TAAGATTGCTCCTTTAATGACACCGCAAGAAGTTTATCCAGTCAAACTGT
GGCTAGTTCTGGGAGTACTAATAGTGGGGCAACAGAGAACTCTCATGTGA
TTGAGTCGGGGAATCTGGTCATATCTGTTCAAGTTCTTCGTAAAGTTACT
CAAAATTTTGCACAGGAAAATGAGCTTGGCCGAGGTGGCTTTGGAACTGT
TTATAAGGGTGAACTGGAAGATGGAACAAAAATTGCAGTCAAGAGAATGG
AGGCTGGCGTGACAACCACCAAAGCACTGGATGAATTTCAATCTGAAATA
GCTGTTCTTTCTAAGGTCCGGCACAGACATCTGGTCTCTCTTTTGGGTTA
TTCTATTGAAGGCAATGAGAGGCTTCTGGTATATGAGTACATGCCTCATG
GTGCTCTAAGCAGACATCTTTTCCAATGGGAGAAGCTGCAGTTGAAGCCT
CTATCTTGGACGAGGAGGCTCAGCATTGCATTGGACGTTGCTAGAGGAAT
GGAGTATCTTCATTGTCTTGCTCGCCAGACCTTTATACATCGAGATCTCA
AATCTTCCAACATTCTTTTGGATGATGACTTTCGGGCAAAAGTTTCAGAT
TTTGGATTGGTGAAACTTGCTCCAGATGGCGAGAAGTCTGTCGTTACTAG
GCTTGCTGGGACATTTGGGTACCTTGCACCGGAATATGCTG
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