CF836201
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836201 vs. ExPASy Swiss-Prot
Match: RL35_PIG (60S ribosomal protein L35 OS=Sus scrofa GN=RPL35 PE=2 SV=3) HSP 1 Score: 133.65 bits (335), Expect = 9.357e-31 Identity = 69/122 (56.56%), Postives = 91/122 (74.59%), Query Frame = -2 Query: 231 MARIKVHELRQKSKVDXXXXXXXXXXXXXXLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 596 MA+IK +LR K K + LRVAKVTGGA +KLSKI+VVR SIA+VLTVI+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRL KH+ +LKT++++++E +P+RK+A+K Sbjct: 1 MAKIKARDLRGKKKEELLKQLEDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKFAVK 122
BLAST of CF836201 vs. ExPASy Swiss-Prot
Match: RL35_OPHHA (60S ribosomal protein L35 OS=Ophiophagus hannah GN=RPL35 PE=2 SV=3) HSP 1 Score: 133.265 bits (334), Expect = 1.222e-30 Identity = 70/122 (57.38%), Postives = 89/122 (72.95%), Query Frame = -2 Query: 231 MARIKVHELRQKSKVDXXXXXXXXXXXXXXLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 596 MA+IK +LR K K + LRVAKVTGGA +KLSKI+VVR SIA+VLTVI+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRL KH+ LKT++++++E +P RKYA+K Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEEGLKTKKQQRKERLYPPRKYAVK 122
BLAST of CF836201 vs. ExPASy Swiss-Prot
Match: RL35_HIPCM (60S ribosomal protein L35 OS=Hippocampus comes GN=rpl35 PE=2 SV=3) HSP 1 Score: 130.568 bits (327), Expect = 7.921e-30 Identity = 67/122 (54.92%), Postives = 91/122 (74.59%), Query Frame = -2 Query: 231 MARIKVHELRQKSKVDXXXXXXXXXXXXXXLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 596 MA+IK +LR K K + LRVAKVTGGA +KLSKI+VVR SIA+VLTVI+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRL KH+ SL+T++++++++ + +RK+A+K Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKNELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVITQTQKENLRKFYKGKKYKPLDLRPKKTRALRRRLNKHEESLRTKKQQRKDLLYSIRKFAVK 122
BLAST of CF836201 vs. ExPASy Swiss-Prot
Match: RL35_XENTR (60S ribosomal protein L35 OS=Xenopus tropicalis GN=rpl35 PE=2 SV=3) HSP 1 Score: 128.257 bits (321), Expect = 3.931e-29 Identity = 67/122 (54.92%), Postives = 88/122 (72.13%), Query Frame = -2 Query: 231 MARIKVHELRQKSKVDXXXXXXXXXXXXXXLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 596 MA+IK +LR K K + LRVAKVTGGA +KLSKI+VVR SIA+VLTVI+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRL KH+ L+T+++++++ F RK+A+K Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRALRRRLNKHEEGLRTKKQQRKDRLFSARKFAVK 122
BLAST of CF836201 vs. ExPASy Swiss-Prot
Match: RL35_ICTPU (60S ribosomal protein L35 OS=Ictalurus punctatus GN=rpl35 PE=2 SV=3) HSP 1 Score: 127.102 bits (318), Expect = 8.758e-29 Identity = 68/122 (55.74%), Postives = 87/122 (71.31%), Query Frame = -2 Query: 231 MARIKVHELRQKSKVDXXXXXXXXXXXXXXLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 596 MA+IK +LR K K + LRVAKVTGGA +KLSKI+VVR SIA+VLTVI+Q QK LR+ YK KK+ PLDLRP+KTRAIRR+LTKH+ L T++ ++R + MRK+A+K Sbjct: 1 MAKIKARDLRGKKKEELLKHVDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPRKTRAIRRQLTKHEQGLMTKKMQRRSRLYSMRKFAVK 122
BLAST of CF836201 vs. ExPASy Swiss-Prot
Match: RL35_PLAFE (60S ribosomal protein L35 OS=Platichthys flesus GN=rpl35 PE=2 SV=3) HSP 1 Score: 126.331 bits (316), Expect = 1.494e-28 Identity = 65/122 (53.28%), Postives = 90/122 (73.77%), Query Frame = -2 Query: 231 MARIKVHELRQKSKVDXXXXXXXXXXXXXXLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 596 MA+IK +LR K K + LRVAKVTGGA +KL+KI VVR SIA+VLTVI+Q QK LR+ YK KK+ PLDLRP+KTRA+RRRL KH+ SL+T++++++++ + +RK+A+K Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKNEPSQLRVAKVTGGAASKLTKICVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPRKTRALRRRLNKHEESLRTKKQQRKDLLYSIRKFAVK 122
BLAST of CF836201 vs. ExPASy Swiss-Prot
Match: RL35_DANRE (60S ribosomal protein L35 OS=Danio rerio GN=rpl35 PE=2 SV=3) HSP 1 Score: 125.946 bits (315), Expect = 1.951e-28 Identity = 67/122 (54.92%), Postives = 88/122 (72.13%), Query Frame = -2 Query: 231 MARIKVHELRQKSKVDXXXXXXXXXXXXXXLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 596 MA+IK +LR K K + LRVAKVTGGA +KLSKI+VVR SIA+VLTVI+Q QK LR+ YK KK+ PLDLRPKKTRAIRR+LTKH+ +L T++ +++ + +RK+A+K Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAIRRQLTKHEENLMTKKMQRKSRLYSIRKFAVK 122
BLAST of CF836201 vs. ExPASy Swiss-Prot
Match: RL35_SCHPO (60S ribosomal protein L35 OS=Schizosaccharomyces pombe GN=rpl35 PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.115e-26 Identity = 61/119 (51.26%), Postives = 83/119 (69.75%), Query Frame = -2 Query: 231 IKVHELRQKSKVDXXXXXXXXXXXXXXLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 587 +K ELR++S+ + LRV K+ GG+ +KLSKIK R IA++LTVI++ + A REAYKNKK++PLDLR KKTRAIRR LT ++ S KT ++ K+E YFP+RKYA+K Sbjct: 3 LKTFELRKQSQENLAEQLQELRQELASLRVQKIAGGSGSKLSKIKTTRKDIARILTVINESNRLAAREAYKNKKYIPLDLRQKKTRAIRRALTPYEQSRKTLKQIKKERYFPLRKYALK 121
BLAST of CF836201 vs. ExPASy Swiss-Prot
Match: RL35_YEAST (60S ribosomal protein L35 OS=Saccharomyces cerevisiae GN=RPL35A PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.655e-22 Identity = 60/122 (49.18%), Postives = 81/122 (66.39%), Query Frame = -2 Query: 231 MARIKVHELRQKSKVDXXXXXXXXXXXXXXLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 596 MA +K +ELR KSK L+V K++ + L KIK VR SIA VLTVI+++Q+ A+R+ YK KK+ P DLR KKTRA+RR LTK +AS TE+++K+++ FP RKYAIK Sbjct: 1 MAGVKAYELRTKSKEQLASQLVDLKKELAELKVQKLSRPS---LPKIKTVRKSIACVLTVINEQQREAVRQLYKGKKYQPKDLRAKKTRALRRALTKFEASQVTEKQRKKQIAFPQRKYAIK 119
BLAST of CF836201 vs. ExPASy Swiss-Prot
Match: RL35_CAEEL (60S ribosomal protein L35 OS=Caenorhabditis elegans GN=rpl-35 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.037e-21 Identity = 57/122 (46.72%), Postives = 81/122 (66.39%), Query Frame = -2 Query: 231 MARIKVHELRQKSKVDXXXXXXXXXXXXXXLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 596 M ++K LR + K LRV+KVTGGA +KLSKI+VVR +IA++LTVI+Q QK LR+ Y + K+ P+DLR KKTRAIRRRLT H+ SL++ +++ + +RK+A+K Sbjct: 1 MTKLKCKSLRGEKKDALQKKLDEQKTELATLRVSKVTGGAASKLSKIRVVRKNIARLLTVINQTQKQELRKFYADHKYKPIDLRLKKTRAIRRRLTAHELSLRSAKQQAKSRNQAVRKFAVK 122 The following BLAST results are available for this feature:
BLAST of CF836201 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836201 ID=CF836201; Name=CF836201; organism=Citrus sinensis; type=EST; length=693bpback to top |