CF836201
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836201 vs. ExPASy Swiss-Prot
Match: RL35_WHEAT (60S ribosomal protein L35 OS=Triticum aestivum GN=RPL35 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.940e-21 Identity = 59/124 (47.58%), Postives = 79/124 (63.71%), Query Frame = -2 Query: 231 VAMARIKVHELRQKSKVDXXXXXXXXXXXXXXLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 602 ++ ++K EL KSK D LR+ KV +KL++I +R SIA+VLTVI+ KQ+A LR YKNKK+ PLDLR K+TRAIRRRL+ + S E+ KKR ++FP RK+AIK Sbjct: 1 MSSGKVKAGELWNKSKDDLTKQLAELKTELGQLRIQKVASSG-SKLNRIHDIRKSIARVLTVINAKQRAQLRLFYKNKKYAPLDLRAKQTRAIRRRLSPDEKSRVLEKTKKRTVHFPQRKFAIK 123
BLAST of CF836201 vs. ExPASy Swiss-Prot
Match: RL35_THEPA (60S ribosomal protein L35 OS=Theileria parva GN=RPL35 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.824e-19 Identity = 53/123 (43.09%), Postives = 75/123 (60.98%), Query Frame = -2 Query: 228 MARIKVHELRQKSKVDXXXXXXXXXXXXXXLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIKV 596 M +++V ELR+KS + RV+KVT +KLSKI +VR ++A+VLTV +Q++K R+ YK PL+LRPK TRA R+ LT Q ++KT +E+KR P RKYA+ V Sbjct: 1 MEKLRVFELREKSDAELLKLLDDLKQELATFRVSKVTATGTSKLSKITLVRKAVAKVLTVYNQRKKEEARKKYKKLSKTPLNLRPKLTRAKRKALTTKQLTMKTIKERKRAENLPKRKYALLV 123
BLAST of CF836201 vs. ExPASy Swiss-Prot
Match: RL36_THELE (60S ribosomal protein L35 OS=Theileria lestoquardi GN=RPL35 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.216e-19 Identity = 52/121 (42.98%), Postives = 73/121 (60.33%), Query Frame = -2 Query: 234 MARIKVHELRQKSKVDXXXXXXXXXXXXXXLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAI 596 M +++V ELR KS + RV+KVT +KLSKI +VR ++A+VLTV +Q++K R+ YK PL+LRPK TRA R+ LT Q ++KT +E+KR P RKYA+ Sbjct: 1 MEKLRVFELRDKSDAELLKLLDDLKQELATFRVSKVTATGTSKLSKITLVRKAVAKVLTVYNQRKKEEARKKYKKLSKTPLNLRPKLTRAKRKALTTKQLTMKTIKERKRAENLPKRKYAL 121
BLAST of CF836201 vs. ExPASy Swiss-Prot
Match: RL35_THEAN (60S ribosomal protein L35 OS=Theileria annulata GN=RPL35 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.122e-18 Identity = 51/119 (42.86%), Postives = 72/119 (60.50%), Query Frame = -2 Query: 234 RIKVHELRQKSKVDXXXXXXXXXXXXXXLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAI 590 +++V ELR KS + RV+KVT +KLSKI +VR ++A+VLTV +Q++K R+ YK PL+LRPK TRA R+ LT Q ++KT +E+KR P RKYA+ Sbjct: 22 KLRVFELRDKSDAELLKLLDDLKQELATFRVSKVTATGTSKLSKITLVRKAVAKVLTVYNQRKKEEARKKYKKLSKTPLNLRPKLTRAKRKGLTTKQLTMKTIKERKRAENLPKRKYAL 140
BLAST of CF836201 vs. ExPASy Swiss-Prot
Match: RL35_BABBO (60S ribosomal protein L35 OS=Babesia bovis GN=RPL35 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.955e-18 Identity = 52/123 (42.28%), Postives = 76/123 (61.79%), Query Frame = -2 Query: 228 MARIKVHELRQKSKVDXXXXXXXXXXXXXXLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIKV 596 M +IKV+ELR K+ + +RV KVT + +KLS+I V+R +IA+VLTV +Q+++ R+ Y +PL++RPK TRA RR LT Q LKT +++K+ FP RKYA+ V Sbjct: 1 MEKIKVYELRNKTDAELLKQLEDLKQEYASMRVQKVTVTSTSKLSQIGVIRKAIAKVLTVYNQRKREEARKQYTKISEMPLNMRPKLTRAKRRALTPKQLHLKTIKQRKKCENFPKRKYALLV 123
BLAST of CF836201 vs. ExPASy Swiss-Prot
Match: RL35_DICDI (60S ribosomal protein L35 OS=Dictyostelium discoideum GN=rpl35 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.004e-16 Identity = 55/122 (45.08%), Postives = 69/122 (56.56%), Query Frame = -2 Query: 231 RIKVHELRQKSKVDXXXXXXXXXXXXXXLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAY--KNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 590 + K ELR K+K LRVA+V P+KL+KI VR +IA+VLTV +Q QK LR Y K+ +P DLR KKTRAIRRRLT Q+ + T R K FP R +A+K Sbjct: 4 KTKAFELRTKNKTQLLEHLKELRTELSSLRVAQVKSPNPSKLAKIGTVRKAIARVLTVFNQTQKNHLRAVYSKKSSSKIPTDLRYKKTRAIRRRLTNKQSKVVTLRVSKTATNFPQRVFAVK 125 The following BLAST results are available for this feature:
BLAST of CF836201 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF836201 ID=CF836201; Name=CF836201; organism=Citrus sinensis; type=EST; length=693bpback to top |