CF836202

Overview
NameCF836202
Unique NameCF836202
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length402
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF836202 vs. ExPASy Swiss-Prot
Match: RL29_SCHPO (60S ribosomal protein L29 OS=Schizosaccharomyces pombe GN=rpl29 PE=2 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 6.667e-12
Identity = 31/48 (64.58%), Postives = 38/48 (79.17%), Query Frame = -2 
Query:  216 MAKSKNHTAHNQFYKAHKNGIKKPKKHRHTSTKGMDPKFLRNQRYARK 359
            MAKSKNHT HNQ  KAH+NGIK+P+KHR+ S K  D KF RNQ++A +
Sbjct:    1 MAKSKNHTNHNQNKKAHRNGIKRPQKHRYDSLKYRDAKFRRNQKFANR 48
The following BLAST results are available for this feature:
BLAST of CF836202 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
RL29_SCHPO6.667e-1264.5860S ribosomal protein L29 OS=Schizosaccharomyces p... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02J10_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02J10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836202 ID=CF836202; Name=CF836202; organism=Citrus sinensis; type=EST; length=402bp
TTTTTTTTTTTTTTTTTAGTAAAAAACATAGCTTAACGACTCTTCAAATA
CTTGAAATTGAAATGAAACCCACTACAGTGCCATCAAGTCACTACAATAA
CAAAAACAAAACAGATATCCATTCAAGGGGTTAAAAAAATCTTAACAACT
AAGTAATTAAAACCCCATAACAGCATCTACTCCTCAGCAGCAGATTCACC
TCCCTGCTTGTTATGCTTCCTTGCATACCTCTGGTTCCTCAGGAACTTTG
GGTCCATCCCTTTGGTGGAAGTGTGGCGGTGCTTCTTAGGTTTCTTGATA
CCGTTCTTGTGAGCCTTGTAAAACTGGTTATGCGCTGTGTGATTCTTTGA
CTTTGCCATCTCGTTTTCAGGAAAAGACCCTGCTCGCGGCTGTGCTAAAA
AT
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