CF836207

Overview
NameCF836207
Unique NameCF836207
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836207 vs. ExPASy Swiss-Prot
Match: ADT3_PIG (ADP/ATP translocase 3 OS=Sus scrofa GN=SLC25A6 PE=2 SV=3)

HSP 1 Score: 153.295 bits (386), Expect = 1.282e-36
Identity = 85/156 (54.49%), Postives = 101/156 (64.74%), Query Frame = 3
Query:  270 SFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDR-DGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLID 734
            SF  DFL GG++AA+SKTA APIERVKLL+Q Q    K       YKGI DC  R  K++G+LS WRGN ANVIRYFPTQALNFAFKD +K++F    D+   +W++FAGN             FVY LD+ARTRLA D    K   ER+F GL D
Sbjct:    7 SFAKDFLAGGIAAAISKTAVAPIERVKLLLQVQHAS-KQIAADKQYKGIVDCIVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKHTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAAD--VGKSATEREFKGLGD 159          
BLAST of CF836207 vs. ExPASy Swiss-Prot
Match: ADT1_BOVIN (ADP/ATP translocase 1 OS=Bos taurus GN=SLC25A4 PE=1 SV=3)

HSP 1 Score: 153.295 bits (386), Expect = 1.282e-36
Identity = 86/154 (55.84%), Postives = 100/154 (64.94%), Query Frame = 3
Query:  270 SFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDR-DGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGL 728
            SFL DFL GGV+AA+SKTA APIERVKLL+Q Q    K       YKGI DC  R  K++G LS WRGN ANVIRYFPTQALNFAFKD +K++F    DR   +W++FAGN             FVY LD+ARTRLA D    K   +R+F GL
Sbjct:    7 SFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHAS-KQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAAD--VGKGAAQREFTGL 157          
BLAST of CF836207 vs. ExPASy Swiss-Prot
Match: ADT_DROME (ADP,ATP carrier protein OS=Drosophila melanogaster GN=sesB PE=2 SV=4)

HSP 1 Score: 152.14 bits (383), Expect = 2.856e-36
Identity = 84/153 (54.90%), Postives = 102/153 (66.67%), Query Frame = 3
Query:  273 FLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRD-GYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGL 728
            F+ DF  GG+SAAVSKTA APIERVKLL+Q Q  + K       YKG+ DCF R  K++G  S WRGN ANVIRYFPTQALNFAFKD +K++F    D++  +W++FAGN             FVY LD+ARTRLA D     KGG+R+F GL
Sbjct:   23 FVKDFAAGGISAAVSKTAVAPIERVKLLLQVQ-HISKQISPDKQYKGMVDCFIRIPKEQGFSSFWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAAD---TGKGGQREFTGL 171          
BLAST of CF836207 vs. ExPASy Swiss-Prot
Match: ADT_CHLKE (ADP,ATP carrier protein OS=Chlorella kessleri PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.851e-35
Identity = 85/184 (46.20%), Postives = 109/184 (59.24%), Query Frame = 3
Query:  201 TGLALVSPVSPI--FVQAPSEKSLS--SFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDE--MIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLID 734
            +GL   S + P   F+ +P E      +F+ D L GG + A+SKTA APIERVKLL+Q QD   MIKSG++   Y GI +CF R   ++G+ S WRGN ANV+RYFPTQA NFAFKD  K LF     +  +W++F  N              VY LD+ARTRLA D  + K    R+F GL+D
Sbjct:   13 SGLLRASAMGPQTPFIASPKETQADPMAFVKDLLAGGTAGAISKTAVAPIERVKLLLQTQDSNPMIKSGQVPR-YTGIVNCFVRVSSEQGVASFWRGNLANVVRYFPTQAFNFAFKDTIKGLFPKYSPKTDFWRFFVVNLASGGLAGAGSLLIVYPLDFARTRLAADVGSGK---SREFTGLVD 192          
BLAST of CF836207 vs. ExPASy Swiss-Prot
Match: ADT_DICDI (Mitochondrial substrate carrier family protein ancA OS=Dictyostelium discoideum GN=ancA PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.560e-34
Identity = 80/158 (50.63%), Postives = 97/158 (61.39%), Query Frame = 3
Query:  255 EKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGL 728
            +  +SSF+ D L+GG +  VSKT  APIERVKLL+Q Q    +       YKGI DCF R  K++G++SLWRGN ANVIRYFPTQALNFAFKD +K+ F     ++   K+F GN             FVY LD+ARTRLA D      G  RQF GL
Sbjct:    6 KNDVSSFVKDSLIGGTAGGVSKTIVAPIERVKLLLQVQSASTQIAA-DKQYKGIVDCFVRVSKEQGVISLWRGNLANVIRYFPTQALNFAFKDKYKKFFVRHTAKENPTKFFIGNLLSGGAAGATSLLFVYPLDFARTRLAADVGT---GSARQFTGL 159          
BLAST of CF836207 vs. ExPASy Swiss-Prot
Match: ADT4_BOVIN (ADP/ATP translocase 4 OS=Bos taurus GN=SLC25A31 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.600e-33
Identity = 82/157 (52.23%), Postives = 96/157 (61.15%), Query Frame = 3
Query:  267 SSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRD-GYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLID 734
            +SF  D L GGV+AAVSKT  APIERVKLL+Q Q    K       YKGI DC  R  +++G LS WRGN ANVIRYFPTQALNFAFKD +K+LF    +++  +W+WF  N              VY LD+ARTRL  D    K   ERQF GL D
Sbjct:   22 TSFGKDLLAGGVAAAVSKTTVAPIERVKLLLQVQASS-KQISPEAQYKGIVDCLVRIPREQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQFWRWFLANLASGGAAGATSLCVVYPLDFARTRLGAD--IGKGPEERQFKGLGD 175          
BLAST of CF836207 vs. ExPASy Swiss-Prot
Match: ADT4_MACFA (ADP/ATP translocase 4 OS=Macaca fascicularis GN=SLC25A31 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.123e-32
Identity = 82/157 (52.23%), Postives = 96/157 (61.15%), Query Frame = 3
Query:  267 SSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRD-GYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLID 734
            SSF  D L GGV+AAVSKTA APIERVKLL+Q Q    K       YKG+ DC  R  +++G  S WRGN ANVIRYFPTQALNFAFKD +K+LF    +++  +W+WF  N              VY LD+ARTRL  D    K   ERQF GL D
Sbjct:   18 SSFGKDLLAGGVAAAVSKTAVAPIERVKLLLQVQASS-KQISPEARYKGMVDCLVRIPREQGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQFWRWFLANLASGGAAGATSLCVVYPLDFARTRLGVD--IGKGPEERQFKGLGD 171          
BLAST of CF836207 vs. ExPASy Swiss-Prot
Match: ADT4_HUMAN (ADP/ATP translocase 4 OS=Homo sapiens GN=SLC25A31 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.123e-32
Identity = 82/157 (52.23%), Postives = 96/157 (61.15%), Query Frame = 3
Query:  267 SSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRD-GYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLID 734
            SSF  D L GGV+AAVSKTA APIERVKLL+Q Q    K       YKG+ DC  R  +++G  S WRGN ANVIRYFPTQALNFAFKD +K+LF    +++  +W+WF  N              VY LD+ARTRL  D    K   ERQF GL D
Sbjct:   18 SSFGKDLLAGGVAAAVSKTAVAPIERVKLLLQVQASS-KQISPEARYKGMVDCLVRIPREQGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQFWRWFLANLASGGAAGATSLCVVYPLDFARTRLGVD--IGKGPEERQFKGLGD 171          
BLAST of CF836207 vs. ExPASy Swiss-Prot
Match: ADT4_MOUSE (ADP/ATP translocase 4 OS=Mus musculus GN=Slc25a31 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.502e-32
Identity = 81/156 (51.92%), Postives = 95/156 (60.90%), Query Frame = 3
Query:  270 SFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRD-GYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLID 734
            SF  D L GGV+AAVSKTA APIERVKLL+Q Q    K       YKG+ DC  R  +++G LS WRGN ANVIRYFPTQALNFAFKD +K LF    +++  +W+WF  N              VY LD+ARTRL  D    K   +RQF GL D
Sbjct:   20 SFSKDLLAGGVAAAVSKTAVAPIERVKLLLQVQASS-KQISPEARYKGMLDCLVRIPREQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKELFMSGVNKEKQFWRWFLANLASGGAAGATSLCVVYPLDFARTRLGVD--IGKGPEQRQFTGLGD 172          
BLAST of CF836207 vs. ExPASy Swiss-Prot
Match: ADT2_ANOGA (ADP,ATP carrier protein 2 OS=Anopheles gambiae GN=AGAP002358 PE=3 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 3.268e-32
Identity = 80/157 (50.96%), Postives = 102/157 (64.97%), Query Frame = 3
Query:  270 SFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRD-GYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGE-RQFNGLID 734
            +F+ DF  GG+SAA+SKTA APIERVKLL+Q Q  + K    +  YKG+ DCF R  +++G  + WRGN ANVIRYFPTQALNFAFKD +K++F    D++  + ++F GN             FVY LD+ARTRLA D     KG E R+F GL D
Sbjct:    9 AFIKDFAAGGISAAISKTAVAPIERVKLLLQVQ-HISKQIAEADRYKGMVDCFVRIPREQGFSAFWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFTRYFIGNLASGGMAGATSLCFVYPLDFARTRLAAD---VGKGAEAREFKGLGD 161          
The following BLAST results are available for this feature:
BLAST of CF836207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
ADT3_PIG1.282e-3654.49ADP/ATP translocase 3 OS=Sus scrofa GN=SLC25A6 PE=... [more]
ADT1_BOVIN1.282e-3655.84ADP/ATP translocase 1 OS=Bos taurus GN=SLC25A4 PE=... [more]
ADT_DROME2.856e-3654.90ADP,ATP carrier protein OS=Drosophila melanogaster... [more]
ADT_CHLKE1.851e-3546.20ADP,ATP carrier protein OS=Chlorella kessleri PE=3... [more]
ADT_DICDI4.560e-3450.63Mitochondrial substrate carrier family protein anc... [more]
ADT4_BOVIN8.600e-3352.23ADP/ATP translocase 4 OS=Bos taurus GN=SLC25A31 PE... [more]
ADT4_MACFA1.123e-3252.23ADP/ATP translocase 4 OS=Macaca fascicularis GN=SL... [more]
ADT4_HUMAN1.123e-3252.23ADP/ATP translocase 4 OS=Homo sapiens GN=SLC25A31 ... [more]
ADT4_MOUSE2.502e-3251.92ADP/ATP translocase 4 OS=Mus musculus GN=Slc25a31 ... [more]
ADT2_ANOGA3.268e-3250.96ADP,ATP carrier protein 2 OS=Anopheles gambiae GN=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS03_02J13_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02J13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836207 ID=CF836207; Name=CF836207; organism=Citrus sinensis; type=EST; length=740bp
CACTAGGCGACCTTCTCAGGTCACCATCTTCAGCTGCAAACATGGCAGAT
GGATCGTATCCATCCGTATTTCAGAAAATGCAAGGCCAGTCATACTTCAT
TTCTGGGGTCTCCCCCAATTTGTATGCCCACAACTACAGTGTGGCAGGTT
CCTTTGTTAATAGAGGATCACAGAATTCTTTTTGGGCAGCAAGTCAGGGA
ACTGGCCTGGCACTTGTGTCTCCTGTTTCTCCTATATTCGTACAAGCTCC
ATCAGAAAAAAGTCTTTCTTCTTTTTTGGTGGATTTTCTCATGGGAGGAG
TTTCAGCAGCTGTTTCCAAGACTGCAGCTGCTCCTATTGAGCGGGTTAAG
CTTTTGATTCAGAATCAAGATGAGATGATCAAGAGTGGTCGGCTCTCGCA
TCCGTACAAGGGGATTTCTGATTGCTTTGGTAGAACTGTTAAGGATGAAG
GCATACTATCTCTTTGGAGAGGCAACACTGCCAATGTTATCAGATACTTC
CCTACCCAGGCCCTGAACTTTGCATTCAAGGATTACTTTAAGAGGCTGTT
TAACTTCAAGAAAGACAGAGATGGCTACTGGAAGTGGTTTGCTGGGAACT
TGGCATCTGGTGGGGCTGCTGGTGCTTCATCGCTTCTTTTTGTGTATTCG
CTTGACTATGCAAGAACACGTTTGGCAAATGATGCTAAGGCAGCTAAAAA
GGGTGGGGAAAGGCAGTTTAATGGTTTGATTGATGTCTAC
back to top