CF836207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836207 vs. ExPASy Swiss-Prot
Match: SCMC1_BOVIN (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Bos taurus GN=SLC25A24 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.686e-12 Identity = 54/185 (29.19%), Postives = 88/185 (47.57%), Query Frame = 3 Query: 180 FWAASQGTGLALVSPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLID 734 FW S G + + F + EK + L GGV+ AVS+T+ AP++R+K+++Q KS +++ I F + VK+ GI SLWRGN NVI+ P A+ F + +K+L + + G ++ F F+Y ++ +TRLA G Q++G+ D Sbjct: 165 FWKHSTGIDIGDSLTIPDEFTE--DEKKSGQWWRQLLAGGVAGAVSRTSTAPLDRLKVMMQVHGS--KSAKMN-----IYGGFQQMVKEGGIRSLWRGNGTNVIKIAPETAVKFWAYEQYKKLLTEEGQKIGTFERFVSG----SMAGATAQTFIYPMEVLKTRLA-------VGKTGQYSGMFD 329
BLAST of CF836207 vs. ExPASy Swiss-Prot
Match: SCMC1_HUMAN (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Homo sapiens GN=SLC25A24 PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.756e-12 Identity = 53/185 (28.65%), Postives = 88/185 (47.57%), Query Frame = 3 Query: 180 FWAASQGTGLALVSPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLID 734 FW S G + + F + EK + L GG++ AVS+T+ AP++R+K+++Q KS +++ I F + VK+ GI SLWRGN NVI+ P A+ F + +K+L + + G ++ F F+Y ++ +TRLA G Q++G+ D Sbjct: 165 FWKHSTGIDIGDSLTIPDEFTE--DEKKSGQWWRQLLAGGIAGAVSRTSTAPLDRLKIMMQVHGS--KSDKMN-----IFGGFRQMVKEGGIRSLWRGNGTNVIKIAPETAVKFWAYEQYKKLLTEEGQKIGTFERFISG----SMAGATAQTFIYPMEVMKTRLA-------VGKTGQYSGIYD 329
BLAST of CF836207 vs. ExPASy Swiss-Prot
Match: MCFR_DICDI (Mitochondrial substrate carrier family protein R OS=Dictyostelium discoideum GN=mcfR PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.756e-12 Identity = 44/137 (32.12%), Postives = 66/137 (48.18%), Query Frame = 3 Query: 267 SSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLA 677 +S +V L GGVS ++K+ AP+ERVK+L Q + +M + + + +K+EG+ LW+GNTA ++R FP A+ + DY K NF D+ + F Y LD R RLA Sbjct: 9 TSPMVTLLAGGVSGVIAKSTIAPLERVKILYQVKSKM-------YSFNSVYGLMKNIIKNEGLAGLWKGNTATILRIFPYSAIQWTSYDYLKN--NFVTDKKSSVQIFIAG----SLGFSCAILLTYPLDVIRARLA 132
BLAST of CF836207 vs. ExPASy Swiss-Prot
Match: SCMC1_MOUSE (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Mus musculus GN=Slc25a24 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.427e-11 Identity = 53/183 (28.96%), Postives = 88/183 (48.09%), Query Frame = 3 Query: 180 FWAASQGTGLALVSPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGL 728 FW S G + + F + EK + L GGV+ AVS+T+ AP++R+K+++Q + + + + G F + VK+ GI SLWRGN NVI+ P A+ F + +K+L + + G ++ F F+Y ++ +TRLA AK G Q++G+ Sbjct: 165 FWKHSTGIDIGDSLTIPDEFTE--DEKKSGQWWRQLLAGGVAGAVSRTSTAPLDRLKVMMQ-----VHGSKSMNIFGG----FRQMVKEGGIRSLWRGNGTNVIKIAPETAVKFWAYEQYKKLLTEEGQKLGTFERFISG----SMAGATAQTFIYPMEVLKTRLA----VAKTG---QYSGI 325
BLAST of CF836207 vs. ExPASy Swiss-Prot
Match: GDC_HUMAN (Graves disease carrier protein OS=Homo sapiens GN=SLC25A16 PE=2 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 2.435e-11 Identity = 58/193 (30.05%), Postives = 85/193 (44.04%), Query Frame = 3 Query: 186 AASQGTGLALVSPVSPIFVQA-----PSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYK--GISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGY-WKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVY 740 AA+ LA P P QA P+ + +L FL GG++ +KT AP++RVK+L+Q + H YK G+ + EG L L++GN A +IR FP A+ F +++K L K G+ + AG+ Y LD R RLA K GE + G+I + Sbjct: 3 AATAAAALAAADP-PPAMPQAAGAGGPTTRRDFYWLRSFLAGGIAGCCAKTTVAPLDRVKVLLQAHN---------HHYKHLGVFSALRAVPQKEGFLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTLITTKLGISGHVHRLMAGSMAGMTAVIC-----TYPLDMVRVRLAFQVK-----GEHSYTGIIHAF 175
BLAST of CF836207 vs. ExPASy Swiss-Prot
Match: SCMC1_RABIT (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Oryctolagus cuniculus GN=SLC25A24 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.180e-11 Identity = 48/185 (25.95%), Postives = 87/185 (47.03%), Query Frame = 3 Query: 180 FWAASQGTGLALVSPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLID 734 FW S G + + F + E+ + L GG++ AVS+T+ AP++R+K+++Q + + + + G F + +K+ G+ SLWRGN NVI+ P A+ F + +K+L + + G ++ F F+Y ++ +TRLA G Q++G+ D Sbjct: 165 FWKHSTGIDIGDSLTIPDEFTE--EERKSGQWWRQLLAGGIAGAVSRTSTAPLDRLKVMMQ-----VHGSKSMNIFGG----FRQMIKEGGVRSLWRGNGTNVIKIAPETAVKFWVYEQYKKLLTEEGQKIGTFERFISG----SMAGATAQTFIYPMEVMKTRLA-------VGKTGQYSGIYD 327 The following BLAST results are available for this feature:
BLAST of CF836207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836207 ID=CF836207; Name=CF836207; organism=Citrus sinensis; type=EST; length=740bpback to top |