CF836209

Overview
NameCF836209
Unique NameCF836209
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7835 contig Csv1_Contig7835:545..1319. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF836209 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 309.301 bits (791), Expect = 1.498e-83
Identity = 142/183 (77.60%), Postives = 159/183 (86.89%), Query Frame = -3
Query:  225 EGGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGLNSVVDVGGGIGATLNMIISKYPSIKGINFDLPHVIQDAPAFPGVEHVGGDMFVSVPKGDAIFIKWICHDWSDEHCVKFLKNCYEALPVNGKVIVAESILPVTPDTSLASKVVIHVDCIMLAHNPGGKERT 773
            EGGIPF+KA+GM AFDY G D RFNKIFN  MS HSTI MKKILE Y GFEGL +VVDVGGG GA LNMI++KYPSIKGINFDLPHVI+DAP++PGVEHVGGDMFV++P GDA+F+KWICHDWSDEHC K LKNCY+ALPVNG+VIVAE ILP  PD SL++K VIH+DCIML H  GGKERT
Sbjct:  131 EGGIPFHKAHGMTAFDYPGTDPRFNKIFNRAMSDHSTIMMKKILETYNGFEGLKTVVDVGGGTGAILNMIVAKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVNIPNGDAVFMKWICHDWSDEHCAKLLKNCYDALPVNGRVIVAEYILPAYPDQSLSTKGVIHMDCIMLTHFSGGKERT 313          
BLAST of CF836209 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 6.292e-82
Identity = 138/215 (64.19%), Postives = 167/215 (77.67%), Query Frame = -3
Query:  129 EGGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGLNSVVDVGGGIGATLNMIISKYPSIKGINFDLPHVIQDAPAFPGVEHVGGDMFVSVPKGDAIFIKWICHDWSDEHCVKFLKNCYEALPVNGKVIVAESILPVTPDTSLASKVVIHVDCIMLAHNPGGKERTEQEFRALAKAAGFQGFQVVSSAFNTYIMEFLK 773
            +GGIPFNKAYGM AF+YHG D RFN++FN GM +HS I  KK+L+ Y GFEG++++VDVGGG+GATL+ I S++P I G+NFDLPHVI +AP FPGV HVGGDMF SVP GDAI +KWI HDWSD HC   LKNCY+ALP NGKVIV E +LPV  + +  ++ V HVD IMLAHNPGGKER E+EFR LAK AGF GF+      N + +EF+K
Sbjct:  150 DGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDFYTGFEGVSTLVDVGGGVGATLHAITSRHPHISGVNFDLPHVISEAPPFPGVRHVGGDMFASVPAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK 364          
BLAST of CF836209 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 301.212 bits (770), Expect = 4.078e-81
Identity = 139/215 (64.65%), Postives = 166/215 (77.21%), Query Frame = -3
Query:  129 EGGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGLNSVVDVGGGIGATLNMIISKYPSIKGINFDLPHVIQDAPAFPGVEHVGGDMFVSVPKGDAIFIKWICHDWSDEHCVKFLKNCYEALPVNGKVIVAESILPVTPDTSLASKVVIHVDCIMLAHNPGGKERTEQEFRALAKAAGFQGFQVVSSAFNTYIMEFLK 773
            +GGIPFNKAYGM AF+YHG D RFN++FN GM +HS I  KK+LE Y GFEG++++VDVGGGIGATL+ I S +P IKGINFDLPHVI +AP FPGV+HVGGDMF SVP GDAI +KWI HDWSD HC   LKNCY+ALP NGKVI+ E +LPV  +    ++ V HVD IMLAHNPGG+ER E+EF  LAK AGF GF+      N + +EF+K
Sbjct:  148 DGGIPFNKAYGMTAFEYHGTDPRFNRVFNEGMKNHSVIITKKLLEFYTGFEGVSTLVDVGGGIGATLHAITSHHPQIKGINFDLPHVISEAPPFPGVQHVGGDMFKSVPAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIIVECVLPVNTEAVPKAQGVFHVDMIMLAHNPGGRERYEREFHDLAKGAGFSGFKATYIYANAWAIEFIK 362          
BLAST of CF836209 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 298.13 bits (762), Expect = 3.452e-80
Identity = 135/216 (62.50%), Postives = 169/216 (78.24%), Query Frame = -3
Query:  129 EGGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGLNSVVDVGGGIGATLNMIISKYPSIKGINFDLPHVIQDAPAFPGVEHVGGDMFVSVPK-GDAIFIKWICHDWSDEHCVKFLKNCYEALPVNGKVIVAESILPVTPDTSLASKVVIHVDCIMLAHNPGGKERTEQEFRALAKAAGFQGFQVVSSAFNTYIMEFLK 773
            +GGIPFNKAYGM AF+YHG D RFN++FN GM +HS I  KK+L+ Y GF+  ++VVDVGGG+GAT+  ++S++P I+GIN+DLPHVI +AP FPGVEHVGGDMF SVP+ GDAI +KWI HDWSDEHC + LKNCY+ALP +GKV+V E +LP + D +   + V HVD IMLAHNPGGKER E+EFR LA+AAGF GF+      N + +EF K
Sbjct:  153 DGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDLYTGFDAASTVVDVGGGVGATVAAVVSRHPHIRGINYDLPHVISEAPPFPGVEHVGGDMFASVPRGGDAILMKWILHDWSDEHCARLLKNCYDALPEHGKVVVVECVLPESSDATAREQGVFHVDMIMLAHNPGGKERYEREFRELARAAGFTGFKATYIYANAWAIEFTK 368          
BLAST of CF836209 vs. ExPASy Swiss-Prot
Match: IMT1_MESCR (Inositol 4-methyltransferase OS=Mesembryanthemum crystallinum GN=IMT1 PE=1 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 9.106e-73
Identity = 119/215 (55.35%), Postives = 161/215 (74.88%), Query Frame = -3
Query:  129 EGGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGLNSVVDVGGGIGATLNMIISKYPSIKGINFDLPHVIQDAPAFPGVEHVGGDMFVSVPKGDAIFIKWICHDWSDEHCVKFLKNCYEALPVNGKVIVAESILPVTPDTSLASKVVIHVDCIMLAHNPGGKERTEQEFRALAKAAGFQGFQVVSSAFNTYIMEFLK 773
            EGG+PF +A+GM  FDY G D RFN +FN GM+ H+ + MKK+L+NY GF  +  +VDVGG IG  ++MI++K+  IKGIN+DLPHVI DAP++PGVEHVGG+MF S+P+ DAIF+KW+ HDWSDEHCVK L  CYE+L   GK+I+ ES++PV P+ +L S +V  +DC  L HN GGKER++++F ALA   GF    V+  A++T++ME  K
Sbjct:  150 EGGVPFKRAHGMIQFDYTGTDERFNHVFNQGMAHHTILVMKKLLDNYNGFNDVKVLVDVGGNIGVNVSMIVAKHTHIKGINYDLPHVIADAPSYPGVEHVGGNMFESIPQADAIFMKWVLHDWSDEHCVKILNKCYESLAKGGKIILVESLIPVIPEDNLESHMVFSLDCHTLVHNQGGKERSKEDFEALASKTGFSTVDVICCAYDTWVMELYK 364          
BLAST of CF836209 vs. ExPASy Swiss-Prot
Match: CHOMT_MEDSA (Isoliquiritigenin 2'-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.364e-60
Identity = 112/211 (53.08%), Postives = 151/211 (71.56%), Query Frame = -3
Query:  129 FNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGLNSVVDVGGGIGATLNMIISKYPSIKGINFDLPHVIQDAPAFPGVEHVGGDMFVSVPKGDAIFIKWICHDWSDEHCVKFLKNCYEALPVNGKVIVAESILPVTPDTSLASKVVIHVDCIMLAHNPGGKERTEQEFRALAKAAGFQGFQVVSSAFNTY-IMEFLK 758
            F   +G+  +++ GKD + N+IFN  M       MK++LE Y GFEG++++VDVGGG G  L +IISKYP IKGINFDLP VI++AP   G+EHVGGDMF SVP+GDA+ +K +CH+WSDE C++FL NC++AL  NGKVI+ E ILP  P+TS  SK+V  +D +M     GG+ERTE+++  L+K +GF  FQV   AFN+  +MEF K
Sbjct:  163 FKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDMFASVPQGDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFI-TVGGRERTEKQYEKLSKLSGFSKFQVACRAFNSLGVMEFYK 372          
BLAST of CF836209 vs. ExPASy Swiss-Prot
Match: SMT_COPJA ((S)-scoulerine 9-O-methyltransferase OS=Coptis japonica GN=SMT PE=1 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 7.484e-59
Identity = 110/215 (51.16%), Postives = 144/215 (66.98%), Query Frame = -3
Query:  129 EGGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGLNSVVDVGGGIGATLNMIISKYPSIKGINFDLPHVIQDAPAFPGVEHVGGDMFVSVPKGDAIFIKWICHDWSDEHCVKFLKNCYEALPVNGKVIVAESILPVTPDTSLASKVVIHVDCIMLAHNPGGKERTEQEFRALAKAAGFQGFQVVSSAFNTYIMEFLK 773
            EG IPF++ +GM+ F Y GK+ R NK FN  M + STI   ++ + YKGF+ L  +VDVGGGIG +L+ I++K+P I+GINF+LPHVI DAP +PGVEHV GDMF  VP    I +KW+ HDW D+  +K LKNC++ALP NG VIV E +LP     +  S   +  D +M+A NPGGKERT  EF  LAKAAGF   +    +   ++MEF K
Sbjct:  164 EGVIPFDRTHGMDFFQYAGKEERVNKSFNQAMGAGSTIAFDEVFKVYKGFDNLKELVDVGGGIGTSLSNIVAKHPHIRGINFELPHVIGDAPDYPGVEHVPGDMFEGVPNAQNILLKWVLHDWDDDRSIKILKNCWKALPENGTVIVIEFVLPQVLGNNAESFNALTPDLLMMALNPGGKERTTIEFDGLAKAAGFAETKFFPISQGLHVMEFHK 378          
BLAST of CF836209 vs. ExPASy Swiss-Prot
Match: 6OMT_COPJA ((RS)-norcoclaurine 6-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.720e-37
Identity = 82/203 (40.39%), Postives = 123/203 (60.59%), Query Frame = -3
Query:  171 EGGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKG-FEGLNSVVDVGGGIGATLNMIISKYPSIKGINFDLPHVIQDAPAFPGVEHVGGDMFVSVPKGDAIFIKWICHDWSDEHCVKFLKNCYEALPV-NGKVIVAESILPVTPDTSLASKVVIHVDCIMLAHNPGGKERTEQEFRALAKAAGFQGFQV 773
            E G  F KA G N + Y  +    N++FN  M++ S + M  +++     F G+ ++VDVGGG G  +  I + +P IK   +DLPHVI D+P +  V  V GDMF  +PK DAI +K I HDW D+ C++ LK C EA+PV  GKVI+ + +L V  +    +K+ + +D  M+  N GGKERTE+E++ L   AG++G ++
Sbjct:  132 ESGTAFEKALGTNIWGYMAEHPEKNQLFNEAMANDSRLIMSALVKECGNIFNGITTLVDVGGGTGTAVRNIANAFPHIKCTVYDLPHVIADSPGYSEVHCVAGDMFKFIPKADAIMMKCILHDWDDKECIEILKRCKEAVPVKGGKVIIVDIVLNVQSEHPY-TKMRLTLDLDMML-NTGGKERTEEEWKKLIHDAGYKGHKI 332          
BLAST of CF836209 vs. ExPASy Swiss-Prot
Match: 4OMT_COPJA (3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 5.219e-36
Identity = 79/204 (38.73%), Postives = 123/204 (60.29%), Query Frame = -3
Query:  171 EGGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKG-FEGLNSVVDVGGGIGATLNMIISKYPSIKGINFDLPHVIQDAPAFPGVEHVGGDMFVSVPKGDAIFIKWICHDWSDEHCVKFLKNCYEALPVN-GKVIVAESILPVTPDTSLAS-KVVIHVDCIMLAHNPGGKERTEQEFRALAKAAGFQGFQV 773
            + G  F KA GM  ++Y       +++FN GM+  + +    ++   +  F+G++S+VDVGGG G T+  I   +P IK   FDLPHVI ++   P +E +GGDMF SVP   AI +K I HDW+DE  +K LK C  A+P + GKVI+ +  L    D  L+S ++++ +D ++   N GGKERT++ +  + K+AGF G ++
Sbjct:  136 DNGTAFEKAMGMTIWEYLEGHPDQSQLFNEGMAGETRLLTSSLISGSRDMFQGIDSLVDVGGGNGTTVKAISDAFPHIKCTLFDLPHVIANSYDLPNIERIGGDMFKSVPSAQAIILKLILHDWNDEDSIKILKQCRNAVPKDGGKVIIVDVALDEESDHELSSTRLILDIDMLV---NTGGKERTKEVWEKIVKSAGFSGCKI 336          
BLAST of CF836209 vs. ExPASy Swiss-Prot
Match: 7OMT8_MEDSA (Isoflavone-7-O-methyltransferase 8 OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.055e-31
Identity = 69/199 (34.67%), Postives = 114/199 (57.29%), Query Frame = -3
Query:  171 FNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGLNSVVDVGGGIGATLNMIISKYPSIKGINFDLPHVIQDAPAFPGVEHVGGDMFVSVPKGDAIFIKWICHDWSDEHCVKFLKNCYEALP---VNGKVIVAESILPVTPDTSLASKVVIHVDCIMLAHNPGGKERTEQEFRALAKAAGFQGFQV 758
            F    G   +D+  K+  +N  FN+ M+S S +    + +    F+GL S+VDVGGG G T  +I   +P +K I FD P V+++      + +VGGDMF S+P  DA+ +K+I H+W+D+ C++ LK C EA+      GKV + + ++    D +  +++ + +D  M   N  GKER E+E++ L   AGFQ +++
Sbjct:  142 FGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKLINLALRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLN--GKERNEEEWKKLFIEAGFQHYKI 338          
The following BLAST results are available for this feature:
BLAST of CF836209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
COMT1_EUCGL1.498e-8377.60Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]
COMT1_MAIZE6.292e-8264.19Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
COMT1_SACOF4.078e-8164.65Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]
OMT1_ORYSJ3.452e-8062.50Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
IMT1_MESCR9.106e-7355.35Inositol 4-methyltransferase OS=Mesembryanthemum c... [more]
CHOMT_MEDSA1.364e-6053.08Isoliquiritigenin 2'-O-methyltransferase OS=Medica... [more]
SMT_COPJA7.484e-5951.16(S)-scoulerine 9-O-methyltransferase OS=Coptis jap... [more]
6OMT_COPJA4.720e-3740.39(RS)-norcoclaurine 6-O-methyltransferase OS=Coptis... [more]
4OMT_COPJA5.219e-3638.733'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltran... [more]
7OMT8_MEDSA5.055e-3134.67Isoflavone-7-O-methyltransferase 8 OS=Medicago sat... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS03_02J15_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02J15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836209 ID=CF836209; Name=CF836209; organism=Citrus sinensis; type=EST; length=775bp
TTTTTTTTTTTTTAAATAAGCAAACTCAAATTCACTTTTTTATCCTTTAT
AAATGGAGAGAAACACGTATATAGGAAAGCCACCCCTTTTCGAGATGCAA
GTCCAGTAGAACAAAAGACTCAAGCACTCTTGAGAAATTCCATAATGTAA
GTATTAAAAGCAGAGCTCACAACTTGGAAACCTTGGAATCCAGCAGCCTT
AGCCAATGCTCTGAACTCTTGTTCAGTCCTCTCTTTGCCACCCGGGTTAT
GAGCCAACATGATGCAGTCGACATGGATGACTACTTTGGATGCAAGGCTT
GTGTCCGGGGTTACTGGGAGGATAGATTCAGCAACAATGACTTTCCCATT
TACTGGGAGTGCTTCATAGCAGTTCTTCAAGAATTTCACGCAGTGCTCAT
CACTCCAATCATGACATATCCACTTGATAAAAATGGCATCTCCCTTTGGA
ACACTAACAAACATGTCTCCCCCAACATGCTCGACACCAGGAAAAGCTGG
AGCATCCTGAATAACATGTGGCAAATCAAAGTTAATGCCTTTAATGGATG
GATACTTGGAGATAATCATGTTAAGTGTGGCTCCAATTCCACCACCAACG
TCGACAACTGAGTTGAGGCCTTCAAACCCTTTGTAATTTTCAAGAATTTT
CTTCATGGTAATGGTAGAATGAGAAGACATTCCATTGTTGAAAATCTTGT
TGAATCTTAGATCTTTGCCATGGTAATCGAATGCATTCATCCCATAGGCC
TTGTTAAATGGAATGCCACCTTCAA
back to top