CF836210

Overview
NameCF836210
Unique NameCF836210
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length733
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836210 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 327.405 bits (838), Expect = 4.885e-89
Identity = 164/221 (74.21%), Postives = 188/221 (85.07%), Query Frame = 2
Query:   74 MGSTSSETQISPAQGSDEEANLL-AMQLTSASVLPMVLKSAIELDLLEIIAKAGPDAFMSPKDIASQLPTKNPDAHTVLDRILRLLASYSVLNCSLRNLPDGKVERLYGLAPVCKFLTKNEDGVTLSDLCLMNQDKVLMESWYYLKDAVLEGGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGLNSVVDVGGGIGATLNMII 733
            MGS ++  QI+    SDEE N L AMQL SASVLPMVLKSAIELDLLE+I K+G  AF+SP D+A+QLPT NPDAH +LDRILRLL SY++L C L+ LPDG VERLYGLAPVCKFLTKNEDGV+++ L LMNQDKVLMESWY+L DAV++GGIPFNKAYGM AF+YHG D RFNK+FN GMS+HSTITMKKILE Y GF+GL +VVDVGGG GATLNMI+
Sbjct:    1 MGSATNTPQIN----SDEEENFLFAMQLASASVLPMVLKSAIELDLLELIKKSGAGAFVSPVDLAAQLPTTNPDAHVMLDRILRLLTSYAILECRLKTLPDGGVERLYGLAPVCKFLTKNEDGVSMAPLTLMNQDKVLMESWYHLSDAVVDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIV 217          
BLAST of CF836210 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 325.094 bits (832), Expect = 2.425e-88
Identity = 165/220 (75.00%), Postives = 185/220 (84.09%), Query Frame = 2
Query:   74 MGSTSSETQISPAQGSDEEANLLAMQLTSASVLPMVLKSAIELDLLEIIAKAGPDAFMSPKDIASQLPTKNPDAHTVLDRILRLLASYSVLNCSLRNLPDGKVERLYGLAPVCKFLTKNEDGVTLSDLCLMNQDKVLMESWYYLKDAVLEGGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGLNSVVDVGGGIGATLNMII 733
            MGST  ETQI+P   SDEEANL AMQL SASVLPM+LKSA+ELDLLEIIAKAGP A +SP +IASQLPT NPDA  +LDR+LRLLA Y +L CS+R   DGKV+RLYGLA V K+L KNEDGV++S L LMNQDKVLMESWY+LKDAVL+GGIPFNKAYGM AF+YHG D RFNK+FN GMS HSTITMKKILE Y GFEGL S+VDVGGG GA +N I+
Sbjct:    1 MGSTG-ETQITPTHISDEEANLFAMQLASASVLPMILKSALELDLLEIIAKAGPGAQISPIEIASQLPTTNPDAPVMLDRMLRLLACYIILTCSVRTQQDGKVQRLYGLATVAKYLVKNEDGVSISALNLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYTGFEGLKSLVDVGGGTGAVINTIV 219          
BLAST of CF836210 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 324.709 bits (831), Expect = 3.167e-88
Identity = 156/205 (76.10%), Postives = 184/205 (89.76%), Query Frame = 2
Query:  119 SDEEANLLAMQLTSASVLPMVLKSAIELDLLEIIAKAGPDAFMSPKDIASQLPTKNPDAHTVLDRILRLLASYSVLNCSLRNLPDGKVERLYGLAPVCKFLTKNEDGVTLSDLCLMNQDKVLMESWYYLKDAVLEGGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGLNSVVDVGGGIGATLNMII 733
            +++EA L AMQL SASVLPMVLKSA+ELDLLEI+AKAGP A +SP ++A+QLPTKNP+A  +LDR+LRLLA+YSVLNC+LR LPDG+VERLY LAPVCK LTKN DGV+++ L LMNQDKVLMESWY+L DAVL+GG+PFNKAYGM AF+YHG D RFNK+FN GMS HST+TMKKILE+YKGFEGLNS+VDVGGG GAT+NMI+
Sbjct:   11 TEDEAFLFAMQLASASVLPMVLKSALELDLLEIMAKAGPGAAISPSELAAQLPTKNPEAPVMLDRMLRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKLLTKNADGVSVAPLLLMNQDKVLMESWYHLTDAVLDGGVPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTMTMKKILEDYKGFEGLNSIVDVGGGTGATVNMIV 215          
BLAST of CF836210 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 323.939 bits (829), Expect = 5.401e-88
Identity = 160/205 (78.05%), Postives = 182/205 (88.78%), Query Frame = 2
Query:  119 SDEEANLLAMQLTSASVLPMVLKSAIELDLLEIIAKAGPDAFMSPKDIASQLPTKNPDAHTVLDRILRLLASYSVLNCSLRNLPDGKVERLYGLAPVCKFLTKNEDGVTLSDLCLMNQDKVLMESWYYLKDAVLEGGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGLNSVVDVGGGIGATLNMII 733
            ++EEA L AM L SASVLPMVLKSAIELDLLE+IAKAGP A++SP ++A+QLPT NP+A  +LDRILRLLA+YSVL+C L NL DG VERLYGLAPVCKFLTKN DGV+++ L LMNQDKVLMESWY+LKDAVL+GGIPFNKAYGM AF+YHG D RFNK+FN GMS+HSTITMKKILE Y+GFEGL +VVDVGGG GATLNMII
Sbjct:    2 AEEEACLFAMSLASASVLPMVLKSAIELDLLELIAKAGPGAYVSPSELAAQLPTHNPEAPIMLDRILRLLATYSVLDCKLNNLADGGVERLYGLAPVCKFLTKNADGVSMAPLLLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILEVYRGFEGLKTVVDVGGGTGATLNMII 206          
BLAST of CF836210 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 321.627 bits (823), Expect = 2.681e-87
Identity = 163/221 (73.76%), Postives = 187/221 (84.62%), Query Frame = 2
Query:   74 MGSTSSETQISPAQGSDEEANLL-AMQLTSASVLPMVLKSAIELDLLEIIAKAGPDAFMSPKDIASQLPTKNPDAHTVLDRILRLLASYSVLNCSLRNLPDGKVERLYGLAPVCKFLTKNEDGVTLSDLCLMNQDKVLMESWYYLKDAVLEGGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGLNSVVDVGGGIGATLNMII 733
            M ST++  QI+    SDEE N L AMQL SASVLPMVLKSAIELDLLE+I KAG  AF+SP ++A+QL T N +AH +LDRILRLL SY++L C L+ LPDG V+RLYGLAPVCKFLTKNEDGV+++ L LMNQDKVLMESWY+LKDAVL+GGIPFNKAYGM AF+YHG D RFNK+FN GMS+HSTITMKKILE Y GF+GL +VVDVGGG GATLNMII
Sbjct:    1 MSSTANNPQIN----SDEEENFLFAMQLASASVLPMVLKSAIELDLLELIKKAGAGAFVSPAELAAQLLTTNAEAHVMLDRILRLLTSYAILECRLKTLPDGGVQRLYGLAPVCKFLTKNEDGVSMAPLALMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMII 217          
BLAST of CF836210 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 1.471e-85
Identity = 148/205 (72.20%), Postives = 182/205 (88.78%), Query Frame = 2
Query:  119 SDEEANLLAMQLTSASVLPMVLKSAIELDLLEIIAKAGPDAFMSPKDIASQLPTKNPDAHTVLDRILRLLASYSVLNCSLRNLPDGKVERLYGLAPVCKFLTKNEDGVTLSDLCLMNQDKVLMESWYYLKDAVLEGGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGLNSVVDVGGGIGATLNMII 733
            +++EA + AMQL SASVLPMVLK+ +ELDLLEI+AK+GP AF+SP ++A+QLPTKNP+A  +LDR+ RLLA+YSVLNC+LR LPDG+VERLY LAPVCKFLTKN DGV+++ + LMNQDKVLMESWY+L DAVL+GG+PFNKAYGM  F+YHG D RFNK+FN GMS H+T++MKKILE+Y GFEGLNS+VDVGGG GAT+NMI+
Sbjct:   11 TEDEAFVFAMQLASASVLPMVLKATVELDLLEIMAKSGPGAFISPSELAAQLPTKNPEAPVMLDRMFRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKFLTKNGDGVSIAPILLMNQDKVLMESWYHLTDAVLDGGVPFNKAYGMTTFEYHGTDPRFNKVFNCGMSDHTTLSMKKILEDYTGFEGLNSIVDVGGGTGATVNMIV 215          
BLAST of CF836210 vs. ExPASy Swiss-Prot
Match: IEMT_CLABR ((Iso)eugenol O-methyltransferase OS=Clarkia breweri GN=IEMT1 PE=1 SV=2)

HSP 1 Score: 311.997 bits (798), Expect = 2.124e-84
Identity = 157/222 (70.72%), Postives = 184/222 (82.88%), Query Frame = 2
Query:   74 MGST-SSETQISPAQGSDEEANLLAMQLTSASVLPMVLKSAIELDLLEIIAKA-GPDAFMSPKDIASQLPTKNPDAHTVLDRILRLLASYSVLNCSLRNLPDGKVERLYGLAPVCKFLTKNEDGVTLSDLCLMNQDKVLMESWYYLKDAVLEGGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGLNSVVDVGGGIGATLNMII 733
            MGST ++E QI P   SDEEANL AMQL SA+VLPM LK+AIELD+LEI+AK+  P  ++SP +IA+QLPT NP+A  +LDR+LRLLASYSV+  +LR LP GKVERLYGLAPVCKFLTKNEDGV+L+   L   DKVL+E W+YLKDA+LEGGIPFNKAYGMN FDYHG D RFNK+FN GMSS+STITMKKILE Y GFEGL ++VDVGGG GA  +MI+
Sbjct:    1 MGSTGNAEIQIIPTHSSDEEANLFAMQLASAAVLPMALKAAIELDVLEIMAKSVPPSGYISPAEIAAQLPTTNPEAPVMLDRVLRLLASYSVVTYTLRELPSGKVERLYGLAPVCKFLTKNEDGVSLAPFLLTATDKVLLEPWFYLKDAILEGGIPFNKAYGMNEFDYHGTDHRFNKVFNKGMSSNSTITMKKILEMYNGFEGLTTIVDVGGGTGAVASMIV 222          
BLAST of CF836210 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 8.352e-81
Identity = 146/201 (72.64%), Postives = 173/201 (86.07%), Query Frame = 2
Query:  131 ANLLAMQLTSASVLPMVLKSAIELDLLEIIAKAGPDAFMSPKDIASQLPTKNPDAHTVLDRILRLLASYSVLNCSLRNLPDGKVERLYGLAPVCKFLTKNEDGVTLSDLCLMNQDKVLMESWYYLKDAVLEGGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGLNSVVDVGGGIGATLNMII 733
            ANL AMQL +ASVLP VL +AIELDLLEI+A+AGP A+++P ++ASQLPT+NPDA  +LDRI RLLASYSVL C+L +LP+GKVERLYGLAP+CKFL KNEDGV+L+ L L++QD+V +ESWYY+KDA+LEGGIPF+KA+GM AFDY G D RFNKIFN  MS HSTI MKKILE Y GFEGL +VVDVGGG GA LNMI+
Sbjct:    1 ANLFAMQLATASVLPAVLTAAIELDLLEIMARAGPGAYLTPGEVASQLPTQNPDAPVMLDRIFRLLASYSVLTCTLCDLPEGKVERLYGLAPLCKFLVKNEDGVSLAPLRLIDQDRVFLESWYYMKDAILEGGIPFHKAHGMTAFDYPGTDPRFNKIFNRAMSDHSTIMMKKILETYNGFEGLKTVVDVGGGTGAILNMIV 201          
BLAST of CF836210 vs. ExPASy Swiss-Prot
Match: OMT1_CHRAE (Quercetin 3-O-methyltransferase 1 OS=Chrysosplenium americanum GN=OMT1 PE=1 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 1.926e-77
Identity = 143/199 (71.86%), Postives = 170/199 (85.43%), Query Frame = 2
Query:  137 LLAMQLTSASVLPMVLKSAIELDLLEIIAKAGPDAFMSPKDIASQLPTKNPDAHTVLDRILRLLASYSVLNCSLRNLPDGKVERLYGLAPVCKFLTKNEDGVTLSDLCLMNQDKVLMESWYYLKDAVLEGGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGLNSVVDVGGGIGATLNMII 733
            L AMQL SASVLPMVLKSAIELDLLEII   G D  MSP +IAS LPT NPDA  ++DRILRLL+ YSV+ CS+R++ D   +R+YGLAPVCK+LTKN+DGV+++ LCLMNQDKVLMESWY+LKDAVL+GGIPFNKAYGM++F+YHG D RFNK+FN GMS HSTITMKK+ + Y+GF+GL S+VDVGGG GATL MI+
Sbjct:    2 LFAMQLASASVLPMVLKSAIELDLLEIIR--GQDTCMSPTEIASHLPTTNPDAPAMVDRILRLLSCYSVVTCSVRSVDD---QRVYGLAPVCKYLTKNQDGVSIAALCLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMSSFEYHGTDPRFNKVFNRGMSDHSTITMKKVFQAYQGFQGLTSLVDVGGGTGATLTMIL 195          
BLAST of CF836210 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 4.290e-77
Identity = 142/199 (71.36%), Postives = 169/199 (84.92%), Query Frame = 2
Query:  137 LLAMQLTSASVLPMVLKSAIELDLLEIIAKAGPDAFMSPKDIASQLPTKNPDAHTVLDRILRLLASYSVLNCSLRNLPDGKVERLYGLAPVCKFLTKNEDGVTLSDLCLMNQDKVLMESWYYLKDAVLEGGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGLNSVVDVGGGIGATLNMII 733
            L AMQL  ASVLPMVLKSAIELDLLEII   G D  MSP +IAS LPT NPDA  ++DRILRLL+ YSV+ CS+R++ D   +R+YGLAPVCK+LTKN+DGV+++ LCLMNQDKVLMESWY+LKDAVL+GGIPFNKAYGM++F+YHG D RFNK+FN GMS HSTITMKK+ + Y+GF+GL S+VDVGGG GATL MI+
Sbjct:    2 LFAMQLACASVLPMVLKSAIELDLLEIIR--GQDTCMSPTEIASHLPTTNPDAPAMVDRILRLLSCYSVVTCSVRSVDD---QRVYGLAPVCKYLTKNQDGVSIAALCLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMSSFEYHGTDPRFNKVFNRGMSDHSTITMKKVFQTYQGFQGLTSLVDVGGGTGATLTMIL 195          
The following BLAST results are available for this feature:
BLAST of CF836210 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
COMT1_OCIBA4.885e-8974.21Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
COMT1_MEDSA2.425e-8875.00Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_CAPAN3.167e-8876.10Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
COMT1_COFCA5.401e-8878.05Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT2_OCIBA2.681e-8773.76Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]
COMT1_CAPCH1.471e-8572.20Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
IEMT_CLABR2.124e-8470.72(Iso)eugenol O-methyltransferase OS=Clarkia brewer... [more]
COMT1_EUCGL8.352e-8172.64Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]
OMT1_CHRAE1.926e-7771.86Quercetin 3-O-methyltransferase 1 OS=Chrysospleniu... [more]
OMT2_CHRAE4.290e-7771.36Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02J15_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02J15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836210 ID=CF836210; Name=CF836210; organism=Citrus sinensis; type=EST; length=733bp
CTCAAATTGAACGTTTCACTAATTTCTCTTCCCCAAAAAAAGAAGGAAAA
GACGGAGAAAAAAAAAGGACAAAATGGGTTCAACCAGTTCAGAAACTCAA
ATAAGTCCAGCCCAAGGCTCGGATGAAGAGGCAAACCTCTTGGCCATGCA
ATTAACCAGTGCCTCAGTCTTGCCTATGGTTCTCAAATCAGCCATTGAGC
TTGATCTTTTAGAGATCATAGCTAAAGCTGGGCCCGATGCTTTCATGTCT
CCAAAAGACATAGCTTCTCAGCTGCCCACAAAGAACCCAGATGCCCATAC
CGTGCTTGATCGTATATTGCGCCTTCTGGCGAGCTATTCAGTCCTTAATT
GCTCTTTGCGCAATCTCCCCGACGGCAAAGTTGAGAGGCTTTATGGCCTT
GCCCCCGTTTGTAAATTCCTCACTAAAAATGAAGATGGTGTTACACTTTC
CGATCTTTGTCTCATGAACCAAGACAAGGTTCTCATGGAGAGCTGGTACT
ACTTAAAAGATGCAGTGCTTGAAGGTGGCATTCCATTTAACAAGGCCTAT
GGGATGAATGCATTCGATTACCATGGCAAAGATCTAAGATTCAACAAGAT
TTTCAACAATGGAATGTCTTCTCATTCTACCATTACCATGAAGAAAATTC
TTGAAAATTACAAAGGGTTTGAAGGCCTCAACTCAGTTGTCGACGTTGGT
GGTGGAATTGGAGCCACACTTAACATGATTATC
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