CF836210

Overview
NameCF836210
Unique NameCF836210
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length733
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836210 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.248e-76
Identity = 142/204 (69.61%), Postives = 168/204 (82.35%), Query Frame = 2
Query:  122 DEEANLLAMQLTSASVLPMVLKSAIELDLLEIIAKAGPDAFMSPKDIASQLP-TKNPDAHTVLDRILRLLASYSVLNCSLRNLPDGKVERLYGLAPVCKFLTKNEDGVTLSDLCLMNQDKVLMESWYYLKDAVLEGGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGLNSVVDVGGGIGATLNMI 730
            D++A L AMQL SASVLPMVLK+AIELDLLE IAKAGP   +S  ++ +QLP   NP+A  ++DRI  LLASYSVL C+L+   DG  ER YGLAPVCKFL KN+ GV+L+ L LMNQDKVLMESWYYLKD VL+GGIPFNKAYGM+AF+YHGKD RFNK+FN+GM +HST+TMKKI+E Y GF GL ++VDVGGG GA+LNMI
Sbjct:    6 DDQAFLFAMQLASASVLPMVLKTAIELDLLETIAKAGPHGSVSSSELVAQLPKVNNPEAPVMIDRICSLLASYSVLTCTLKETADGCAERFYGLAPVCKFLIKNDAGVSLAPLLLMNQDKVLMESWYYLKDPVLDGGIPFNKAYGMSAFEYHGKDQRFNKVFNSGMFNHSTMTMKKIVELYNGFSGLKTLVDVGGGTGASLNMI 209          
BLAST of CF836210 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 3.640e-68
Identity = 129/227 (56.83%), Postives = 170/227 (74.89%), Query Frame = 2
Query:   74 MGSTSSETQISPAQGSDEEANLLAMQLTSASVLPMVLKSAIELDLLEIIAKA------GPDAFMSPKDIASQLPTK-NPDAHTVLDRILRLLASYSVLNCSLRNLPDGKVERLYGLAPVCKFLTKNEDGVTLSDLCLMNQDKVLMESWYYLKDAVLEGGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGLNSVVDVGGGIGATLNMII 733
            MGST+++     A  +DEEA + A+QL S+S+LPM LK+AIEL LLE +  A      G  A ++P ++A +LP+K NP A  ++DR+LRLLASY+V+ C +    DGK+ R Y  APVCK+LT NEDGV+++ L LMNQDKVLMESWYYLKDAVL+GGIPFNKAYGM AF+YHG D RFN++FN GM +HS I  KK+L+ Y GF+  ++VVDVGGG+GAT+  ++
Sbjct:    1 MGSTAADM----AAAADEEACMYALQLASSSILPMTLKNAIELGLLETLQSAAVAGGGGKAALLTPAEVADKLPSKANPAAADMVDRMLRLLASYNVVRCEMEEGADGKLSRRYAAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDLYTGFDAASTVVDVGGGVGATVAAVV 223          
BLAST of CF836210 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 8.109e-68
Identity = 133/222 (59.91%), Postives = 171/222 (77.03%), Query Frame = 2
Query:   74 MGSTSSETQISPAQGSDEEANLLAMQLTSASVLPMVLKSAIELDLLEII-AKAGPDAFMSPKDIASQLPTK--NPDAHTVLDRILRLLASYSVLNCSLRNLPDGKVERLYGLAPVCKFLTKNEDGVTLSDLCLMNQDKVLMESWYYLKDAVLEGGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGLNSVVDVGGGIGATLNMI 730
            MGST+ +     A  +DEEA + AMQL SAS+LPM LK+A+EL LLE++ A+A     ++P+++ ++LP    NPDA  ++DR+LRLLASY V+ C + +  DGK ER Y  APV K+LT NEDGV+++ L LMNQDKVLMESWYYLKDAVL+GGIPFNKAYGM AF+YHG D RFN++FN GM +HS I  KK+LE Y GFEG++++VDVGGGIGATL+ I
Sbjct:    1 MGSTAEDV----AAVADEEACMYAMQLASASILPMTLKNALELGLLEVLQAEAPAGKALAPEEVVARLPVAPTNPDAADMVDRMLRLLASYDVVKCQMED-KDGKYERRYSAAPVGKWLTPNEDGVSMAALTLMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNRVFNEGMKNHSVIITKKLLEFYTGFEGVSTLVDVGGGIGATLHAI 217          
BLAST of CF836210 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 8.965e-67
Identity = 129/224 (57.59%), Postives = 169/224 (75.45%), Query Frame = 2
Query:   74 MGSTSSETQISPAQGSDEEANLLAMQLTSASVLPMVLKSAIELDLLEIIAK--AGPDAFMSPKDIASQLPTKNPD---AHTVLDRILRLLASYSVLNCSLRNLPDGKVERLYGLAPVCKFLTKNEDGVTLSDLCLMNQDKVLMESWYYLKDAVLEGGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGLNSVVDVGGGIGATLNMI 730
            MGST+ +     A   DEEA + AMQL S+S+LPM LK+AIEL LLE++ K   G  A ++P+++ +++P    D   A  ++DR+LRLLASY V+ C + +  DG+ ER Y  APVCK+LT NEDGV+++ L LMNQDKVLMESWYYLKDAVL+GGIPFNKAYGM AF+YHG D RFN++FN GM +HS I  KK+L+ Y GFEG++++VDVGGG+GATL+ I
Sbjct:    1 MGSTAGDV----AAVVDEEACMYAMQLASSSILPMTLKNAIELGLLEVLQKEAGGGKAALAPEEVVARMPAAPSDPAAAAAMVDRMLRLLASYDVVRCQMEDR-DGRYERRYSAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDFYTGFEGVSTLVDVGGGVGATLHAI 219          
BLAST of CF836210 vs. ExPASy Swiss-Prot
Match: IMT1_MESCR (Inositol 4-methyltransferase OS=Mesembryanthemum crystallinum GN=IMT1 PE=1 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 7.872e-55
Identity = 102/204 (50.00%), Postives = 146/204 (71.57%), Query Frame = 2
Query:  122 DEEANLLAMQLTSASVLPMVLKSAIELDLLEIIAKAGPDAFMSPKDIASQLPTKNPDAHTVLDRILRLLASYSVLNCSLRNLPDGKVERLYGLAPVCKFLTKNEDGVTLSDLCLMNQDKVLMESWYYLKDAVLEGGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGLNSVVDVGGGIGATLNMII 733
            DE+   LA+ L +A+  PM+LKSA EL +L+I +KAG   F+S  +IASQ+  KNP+A  +LDR+LRLLAS+SVL C L+   +G  +R+YG AP+C +L  N+   +L  L +++ DKV+MESW++L D +LEGG+PF +A+GM  FDY G D RFN +FN GM+ H+ + MKK+L+NY GF  +  +VDVGG IG  ++MI+
Sbjct:   18 DEQLAGLAVTLANAAAFPMILKSAFELKILDIFSKAGEGVFVSTSEIASQIGAKNPNAPVLLDRMLRLLASHSVLTCKLQK-GEGGSQRVYGPAPLCNYLASNDGQGSLGPLLVLHHDKVMMESWFHLNDYILEGGVPFKRAHGMIQFDYTGTDERFNHVFNQGMAHHTILVMKKLLDNYNGFNDVKVLVDVGGNIGVNVSMIV 220          
BLAST of CF836210 vs. ExPASy Swiss-Prot
Match: SMT_COPJA ((S)-scoulerine 9-O-methyltransferase OS=Coptis japonica GN=SMT PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.431e-42
Identity = 92/200 (46.00%), Postives = 132/200 (66.00%), Query Frame = 2
Query:  137 LLAMQLTSASVLPMVLKSAIELDLLEIIAKAGPDAFMSPKDIASQLPTKNPDAHTVLDRILRLLASYSVLNCSLRNLPDGKVERLYGLAPVCKFLTKNEDGVTLSDLCLMNQDKVLMESWYYLKDAVLEGG-IPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGLNSVVDVGGGIGATLNMII 733
            L  + L+    LPM L++AIEL++ EII++AGPDA +SP DI +++PTKNP A   LDRILR+L + S+L+ S       K  R+YGL    + L  +ED V++  + L   DK ++ES+Y +KD VLE G IPF++ +GM+ F Y GK+ R NK FN  M + STI   ++ + YKGF+ L  +VDVGGGIG +L+ I+
Sbjct:   40 LSGLGLSRLICLPMALRAAIELNVFEIISQAGPDAQLSPSDIVAKIPTKNPSAAISLDRILRMLGASSILSVSTT-----KSGRVYGLNEESRCLVASEDKVSVVPMLLFTSDKAVVESFYNIKDVVLEEGVIPFDRTHGMDFFQYAGKEERVNKSFNQAMGAGSTIAFDEVFKVYKGFDNLKELVDVGGGIGTSLSNIV 234          
BLAST of CF836210 vs. ExPASy Swiss-Prot
Match: CHOMT_MEDSA (Isoliquiritigenin 2'-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 7.153e-40
Identity = 98/222 (44.14%), Postives = 139/222 (62.61%), Query Frame = 2
Query:   83 TSSETQISP-AQGSDEEANLLAMQLTSASVLPMVLKSAIELDLLEIIAKAGPD-AFMSPKDIASQLP--TKNPDAHTVLDRILRLLASYSVLNCSLRNLPDGKVERLYGLAPVCKFLTKNEDGVTLSDLCLMNQDKVLMESWYYLKDAVLEGGIP-FNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKGFEGLNSVVDVGGGIGATLNMII 733
            T  + QIS  ++ +++ A L AM LT+  V P VL +AI+L+L EIIAKA P  AFMSP +IAS+LP  T++ D    LDR+LRLLASYSVL  + R + DG  ER+YGL+ V K+L  +E    L+          L++ W   K+AV++  I  F   +G+  +++ GKD + N+IFN  M       MK++LE Y GFEG++++VDVGGG G  L +II
Sbjct:    7 TKEDNQISATSEQTEDSACLSAMVLTTNLVYPAVLNAAIDLNLFEIIAKATPPGAFMSPSEIASKLPASTQHSDLPNRLDRMLRLLASYSVLTSTTRTIEDGGAERVYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQVWMNFKEAVVDEDIDLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIYTGFEGISTLVDVGGGSGRNLELII 228          
BLAST of CF836210 vs. ExPASy Swiss-Prot
Match: 6OMT_COPJA ((RS)-norcoclaurine 6-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.512e-18
Identity = 63/187 (33.69%), Postives = 99/187 (52.94%), Query Frame = 2
Query:  176 MVLKSAIELDLLEIIAKAGPDAFMSPKDIASQLPTKNPDAHTVLDRILRLLASYSVLNCSLRNLPDGKVERLYGLAPVCKFLTKNEDGVTLSDLCLMNQDKVLMESWYYLKDAVL-EGGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKG-FEGLNSVVDVGGGIGATLNMI 730
            +VLK A++LDL  II  +G    +S  +++S+LP++ P     L R++R L    +     +   DG++   YGLAP  K+L K  D   +  + L   DK  M  W+YLKD +  E G  F KA G N + Y  +    N++FN  M++ S + M  +++     F G+ ++VDVGGG G  +  I
Sbjct:   25 LVLKCAVQLDLANIIHNSGTSMTLS--ELSSRLPSQ-PVNEDALYRVMRYLVHMKLFT---KASIDGELR--YGLAPPAKYLVKGWDKCMVGSI-LAITDKDFMAPWHYLKDGLSGESGTAFEKALGTNIWGYMAEHPEKNQLFNEAMANDSRLIMSALVKECGNIFNGITTLVDVGGGTGTAVRNI 202          
BLAST of CF836210 vs. ExPASy Swiss-Prot
Match: 4OMT_COPJA (3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.229e-15
Identity = 57/186 (30.65%), Postives = 97/186 (52.15%), Query Frame = 2
Query:  176 MVLKSAIELDLLEIIAKAGPDAFMSPKDIASQLPTKNPDAHTVLDRILRLLASYSVLNCSLRNLPDGKVERLYGLAPVCKFLTKNEDGVTLSDLCLMNQDKVLMESWYYLKDAVLEGGIPFNKAYGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKILENYKG-FEGLNSVVDVGGGIGATLNMI 730
            +VL+ A+EL +++II        M+  D+AS+LP  + +    L RILR L    +L   +    DG  ++ Y L P+   L++N     +  +  M Q K  M  W+ +KD + + G  F KA GM  ++Y       +++FN GM+  + +    ++   +  F+G++S+VDVGGG G T+  I
Sbjct:   29 LVLRCAVELGIVDIIDNNNQP--MALADLASKLPVSDVNCDN-LYRILRYLVKMEILR--VEKSDDG--QKKYALEPIATLLSRNAKRSMVPMILGMTQ-KDFMTPWHSMKDGLSDNGTAFEKAMGMTIWEYLEGHPDQSQLFNEGMAGETRLLTSSLISGSRDMFQGIDSLVDVGGGNGTTVKAI 206          
The following BLAST results are available for this feature:
BLAST of CF836210 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
COMT1_ZINEL1.248e-7669.61Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]
OMT1_ORYSJ3.640e-6856.83Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
COMT1_SACOF8.109e-6859.91Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]
COMT1_MAIZE8.965e-6757.59Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
IMT1_MESCR7.872e-5550.00Inositol 4-methyltransferase OS=Mesembryanthemum c... [more]
SMT_COPJA3.431e-4246.00(S)-scoulerine 9-O-methyltransferase OS=Coptis jap... [more]
CHOMT_MEDSA7.153e-4044.14Isoliquiritigenin 2'-O-methyltransferase OS=Medica... [more]
6OMT_COPJA4.512e-1833.69(RS)-norcoclaurine 6-O-methyltransferase OS=Coptis... [more]
4OMT_COPJA1.229e-1530.653'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltran... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02J15_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02J15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836210 ID=CF836210; Name=CF836210; organism=Citrus sinensis; type=EST; length=733bp
CTCAAATTGAACGTTTCACTAATTTCTCTTCCCCAAAAAAAGAAGGAAAA
GACGGAGAAAAAAAAAGGACAAAATGGGTTCAACCAGTTCAGAAACTCAA
ATAAGTCCAGCCCAAGGCTCGGATGAAGAGGCAAACCTCTTGGCCATGCA
ATTAACCAGTGCCTCAGTCTTGCCTATGGTTCTCAAATCAGCCATTGAGC
TTGATCTTTTAGAGATCATAGCTAAAGCTGGGCCCGATGCTTTCATGTCT
CCAAAAGACATAGCTTCTCAGCTGCCCACAAAGAACCCAGATGCCCATAC
CGTGCTTGATCGTATATTGCGCCTTCTGGCGAGCTATTCAGTCCTTAATT
GCTCTTTGCGCAATCTCCCCGACGGCAAAGTTGAGAGGCTTTATGGCCTT
GCCCCCGTTTGTAAATTCCTCACTAAAAATGAAGATGGTGTTACACTTTC
CGATCTTTGTCTCATGAACCAAGACAAGGTTCTCATGGAGAGCTGGTACT
ACTTAAAAGATGCAGTGCTTGAAGGTGGCATTCCATTTAACAAGGCCTAT
GGGATGAATGCATTCGATTACCATGGCAAAGATCTAAGATTCAACAAGAT
TTTCAACAATGGAATGTCTTCTCATTCTACCATTACCATGAAGAAAATTC
TTGAAAATTACAAAGGGTTTGAAGGCCTCAACTCAGTTGTCGACGTTGGT
GGTGGAATTGGAGCCACACTTAACATGATTATC
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