CF836211

Overview
NameCF836211
Unique NameCF836211
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length783
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CF836211_ssr495 microsatellite CF836211_ssr495:495..506. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig12843 contig Csv1_Contig12843:634..1416. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF836211 vs. ExPASy Swiss-Prot
Match: SAP4_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Oryza sativa subsp. japonica GN=SAP4 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.707e-30
Identity = 65/170 (38.24%), Postives = 93/170 (54.71%), Query Frame = -2
Query:  204 EEHRCQAPR---LCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQSSSAKHALNQTL-------------ISSSSVDLSLRERPATDXXXXXXXXXXXXXXXXXVQSTAANRCMTCRRRVGLTGFKCRCGSVFCGTHRYPEQHACSFDFKEMGKEQIARANPVVKAEKLQKI 665
            +E  CQ P    LC+NNCGFFGS  T N+CSKC +++ +K +Q+  A  +++  +               S++V ++  E                            NRC TCR+RVGLTGF CRCG+++C  HRY ++H C FD++   ++ IA+ANPVVKAEKL KI
Sbjct:    4 KEAGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNGCDGGKEHIVAASGSTAVAVAQVEAKTLVVQPTDVAGTSEEVAVVPKVKEGPNRCATCRKRVGLTGFNCRCGNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173          
BLAST of CF836211 vs. ExPASy Swiss-Prot
Match: SAP8_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. japonica GN=SAP8 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.169e-29
Identity = 65/168 (38.69%), Postives = 91/168 (54.17%), Query Frame = -2
Query:  204 EEHRCQAPR---LCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQSSSAKHALNQTLISSSS-----------VDLSLRERPATDXXXXXXXXXXXXXXXXXVQSTAANRCMTCRRRVGLTGFKCRCGSVFCGTHRYPEQHACSFDFKEMGKEQIARANPVVKAEKLQKI 665
            +E  CQ P    LC+NNCGFFGS  T N+CSKC +++ +K +Q+  A  +++  +    S           V ++  E                            NRC TCR+RVGLTGF CRCG+++C  HRY ++H C FD++   ++ IA+ANPVVKAEKL KI
Sbjct:    4 KETGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVNGGDSGKEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171          
BLAST of CF836211 vs. ExPASy Swiss-Prot
Match: SAP8_ORYSI (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. indica GN=SAP8 PE=2 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 2.169e-29
Identity = 65/168 (38.69%), Postives = 91/168 (54.17%), Query Frame = -2
Query:  204 EEHRCQAPR---LCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQSSSAKHALNQTLISSSS-----------VDLSLRERPATDXXXXXXXXXXXXXXXXXVQSTAANRCMTCRRRVGLTGFKCRCGSVFCGTHRYPEQHACSFDFKEMGKEQIARANPVVKAEKLQKI 665
            +E  CQ P    LC+NNCGFFGS  T N+CSKC +++ +K +Q+  A  +++  +    S           V ++  E                            NRC TCR+RVGLTGF CRCG+++C  HRY ++H C FD++   ++ IA+ANPVVKAEKL KI
Sbjct:    4 KETGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVNGGDSGKEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171          
BLAST of CF836211 vs. ExPASy Swiss-Prot
Match: SAP3_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Oryza sativa subsp. japonica GN=SAP3 PE=2 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 1.076e-28
Identity = 65/163 (39.88%), Postives = 94/163 (57.67%), Query Frame = -2
Query:  213 LKMAEEHRCQA--PRLCVNNCGFFGSPTTQNLCSKCFRDLQL-----KAQQSSSAKHALNQTLISSSSVDLSLRERPATDXXXXXXXXXXXXXXXXXVQSTA-ANRCMTCRRRVGLTGFKCRCGSVFCGTHRYPEQHACSFDFKEMGKEQIARANPVVKAEKL 677
            +KM+ E +  A  P LC + CGF+G+P T ++CS C+R   L      A   SS+  A +   +++ +V       P+ +                 V+  A ANRC +C+++VGL GF CRCG+ +CGTHRYPE+HAC FDFK   ++ IARANP++K EKL
Sbjct:  189 IKMSSEQQASAGQPVLCASGCGFYGNPATLDMCSVCYRQHCLLNGATMATGPSSSVAAASAATVATGAVTSDSCSVPSAEVNGAAFSSKNNPEPATVVEKKAPANRCASCKKKVGLLGFACRCGATYCGTHRYPEKHACGFDFKGASRDAIARANPLIKGEKL 351          
BLAST of CF836211 vs. ExPASy Swiss-Prot
Match: SAP12_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 12 OS=Oryza sativa subsp. japonica GN=SAP12 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.342e-28
Identity = 62/148 (41.89%), Postives = 90/148 (60.81%), Query Frame = -2
Query:  207 LCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQSSSAKHALNQTLISSSSVDLSLRERPATDXXXXXXXXXXXXXXXXXVQSTAA----NRCMTCRRRVGLTGFKCRCGSVFCGTHRYPEQHACSFDFKEMGKEQIARANPVVKAEKLQK 638
            LC + CGFFGS  T N+CSKC+RD  LKA   +S   + + +  ++S+ D+++   PAT                    S AA    NRC+ CR++VGL GF+CRCG  FC THR+ ++HAC+FDFK+  +E+IA+ NP++ A K+ K
Sbjct:   80 LCSSGCGFFGSKETNNMCSKCYRD-HLKA---TSPLFSSSSSPATASTTDITVPIAPATTAPTPSLKGKEEEATAAASSSAAAAAKPNRCVACRKKVGLLGFECRCGGTFCSTHRHADKHACTFDFKKSDREKIAKENPLIVAPKITK 223          
BLAST of CF836211 vs. ExPASy Swiss-Prot
Match: SAP11_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 11 OS=Oryza sativa subsp. japonica GN=SAP11 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.713e-27
Identity = 66/170 (38.82%), Postives = 91/170 (53.53%), Query Frame = -2
Query:  213 KMAEEHRCQAPR--LCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQSSSAKHALN-------------QTLISSSSVDLSLR-ERPATDXXXXXXXXXXXXXXXXXVQSTAANRCMTCRRRVGLTGFKCRCGSVFCGTHRYPEQHACSFDFKEMGKEQIARANPVVKAEKL 674
            K+ E    +AP   LC N+CGF G+P T NLC  CF      +  SS+A                  Q + SS++  ++L  ERP                     +S++ NRC +CRRRVGLTGF+CRCG ++CG HRY ++H CSFD+K   ++ IAR NPVV+A K+
Sbjct:    7 KVEEPTELRAPEMTLCANSCGFPGNPATNNLCQNCFLAASASSSSSSAAASPSTTSLPVFPVVEKPRQAVQSSAAAAVALVVERPTAGPVESSSKAS---------RSSSVNRCHSCRRRVGLTGFRCRCGELYCGAHRYSDRHDCSFDYKSAARDAIARENPVVRAAKI 167          
BLAST of CF836211 vs. ExPASy Swiss-Prot
Match: SAP7_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Oryza sativa subsp. japonica GN=SAP7 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.316e-26
Identity = 63/161 (39.13%), Postives = 85/161 (52.80%), Query Frame = -2
Query:  213 LCVNNCGFFGSPTTQNLCSKCFR-----------------DLQLKAQQSSSAKHALNQTLI--SSSSVDLSLRERPATDXXXXXXXXXXXXXXXXXVQSTAANRCMTCRRRVGLTGFKCRCGSVFCGTHRYPEQHACSFDFKEMGKEQIARANPVVKAEKL 638
            +CV  CGFFGS  T N+CS+C+R                 DL+L     ++ K A    ++  + +S   +  E+PA                     +TA NRC  CR++VGLTGFKCRCG  FCG HR+ + H C FD+K  GKEQIA+ NP+V A+KL
Sbjct:   23 MCVTGCGFFGSEATNNMCSRCYREHSADNDAVEEAAAANSDLELVGVAETTTKKARMSAVVPVAVASSSSAAAEQPAAKA------------------ATAPNRCAACRKKVGLTGFKCRCGGNFCGGHRHADAHGCGFDYKSAGKEQIAKQNPLVVADKL 165          
BLAST of CF836211 vs. ExPASy Swiss-Prot
Match: SAP5_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Arabidopsis thaliana GN=SAP5 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.244e-26
Identity = 60/157 (38.22%), Postives = 84/157 (53.50%), Query Frame = -2
Query:  204 KMAEEHRCQAPRLCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQSSSAKHALNQTLISSSSVDLSLRERPATDXXXXXXXXXXXXXXXXXVQSTAANRCMTCRRRVGLTGFKCRCGSVFCGTHRYPEQHACSFDFKEMGKEQIARANPVVKAEKLQKI 674
            K+ E        LC NNCG   +P T N+C KCF      +  S++A    + +++  S+  ++LR  PA                         NRC  CR++VGLTGF+CRCG +FC  HRY ++H CS+D+K  G+E IAR NPVVKA K+ K+
Sbjct:   13 KVLETLTTTTTTLCTNNCGVTANPATNNMCQKCFN----ASLVSAAAGVVESGSILKRSARSVNLRSSPAK-----VVIRPREIDAVKKRDQQIVNRCSGCRKKVGLTGFRCRCGELFCSEHRYSDRHDCSYDYKTAGREAIARENPVVKAAKMVKV 160          
BLAST of CF836211 vs. ExPASy Swiss-Prot
Match: SAP1_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Oryza sativa subsp. japonica GN=SAP1 PE=2 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 5.000e-26
Identity = 63/159 (39.62%), Postives = 83/159 (52.20%), Query Frame = -2
Query:  213 EHRCQAPRLCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQSSSAKHALNQTLISSSSVDLSLRERPATDXXXXXXXXXXXXXXXXXVQST---------AANRCMTCRRRVGLTGFKCRCGSVFCGTHRYPEQHACSFDFKEMGKEQIARANPVVKAEKL 662
            E R     LC N+CGF G+P TQNLC  CF    L A  S+S+  +L+  ++           RPA                     +T         A NRC  CR+RVGLTGF+CRCG +FCG HRY ++H CS+D+K   ++ IAR NPVV+A K+
Sbjct:   13 ELRAPEITLCANSCGFPGNPATQNLCQNCF----LAATASTSSPSSLSSPVLDKQP------PRPAAPLVEPQAPLPPPVEEMASALATAPAPVAKTSAVNRCSRCRKRVGLTGFRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKI 161          
BLAST of CF836211 vs. ExPASy Swiss-Prot
Match: SAP1_ORYSI (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Oryza sativa subsp. indica GN=SAP1 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.000e-26
Identity = 63/159 (39.62%), Postives = 83/159 (52.20%), Query Frame = -2
Query:  213 EHRCQAPRLCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQSSSAKHALNQTLISSSSVDLSLRERPATDXXXXXXXXXXXXXXXXXVQST---------AANRCMTCRRRVGLTGFKCRCGSVFCGTHRYPEQHACSFDFKEMGKEQIARANPVVKAEKL 662
            E R     LC N+CGF G+P TQNLC  CF    L A  S+S+  +L+  ++           RPA                     +T         A NRC  CR+RVGLTGF+CRCG +FCG HRY ++H CS+D+K   ++ IAR NPVV+A K+
Sbjct:   13 ELRAPEITLCANSCGFPGNPATQNLCQNCF----LAATASTSSPSSLSSPVLDKQP------PRPAAPLVEPQAPLPPPVEEMASALATAPAPVAKTSAVNRCSRCRKRVGLTGFRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKI 161          
The following BLAST results are available for this feature:
BLAST of CF836211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
SAP4_ORYSJ5.707e-3038.24Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP8_ORYSJ2.169e-2938.69Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP8_ORYSI2.169e-2938.69Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP3_ORYSJ1.076e-2839.88Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP12_ORYSJ5.342e-2841.89Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP11_ORYSJ7.713e-2738.82Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP7_ORYSJ1.316e-2639.13Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP5_ARATH2.244e-2638.22Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP1_ORYSJ5.000e-2639.62Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP1_ORYSI5.000e-2639.62Zinc finger A20 and AN1 domain-containing stress-a... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02J16_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02J16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836211 ID=CF836211; Name=CF836211; organism=Citrus sinensis; type=EST; length=783bp
TTTTTTTTTTTTTTTGTAGTAAAACTTGAAATTATCATCGAATTTTACAT
ACACCACATAATAACACTGCCAACCCCCTCCGGGCCCACCCCTTCGGTTC
CCCCGACCATCACGGCGGCGTCCGACACGAAACGACGCCGTGAAATGCCA
AATTACAAACCAAACGACAGAGAGAAGAATCGTCCGTTCGATTCCATTCA
TCATATCTTTTGAAGCTTCTCAGCCTTCACAACAGGATTTGCCCTCGCAA
TCTGCTCTTTGCCCATCTCTTTGAAATCGAACGAACACGCGTGCTGCTCC
GGGTACCTGTGGGTCCCGCAGAACACCGACCCGCACCTGCACTTGAACCC
CGTGAGCCCCACGCGCCTCCTGCAAGTCATGCACCTGTTCGCCGCCGTCG
ACTGCACCGGAGCGGCCACCTCAGCCGGCGGCTTCTCCGCCTCTGCCGCT
ACCTCCACGTCCGTCGCCGGTCTCTCGCGCAGAGACAAATCAACCGACGA
CGACGAAATCAGGGTTTGGTTAAGGGCGTGTTTGGCCGAGGAAGATTGTT
GTGCTTTCAACTGAAGATCGCGAAAACATTTGGAGCAGAGATTTTGAGTT
GTTGGGCTCCCGAAAAATCCGCAGTTGTTCACGCACAAACGGGGTGCTTG
ACATCTGTGCTCTTCCGCCATCTTCAACCTTTACAGCAAAATTTTCCATT
CCAAATCAGTTGATTGAAATCTTGCAAACTGATATAAAAATTTATAAGAC
TTCGATTTTATCCATATTATTCCTATTTGAAAT
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