CF836233

Overview
NameCF836233
Unique NameCF836233
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length637
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836233 vs. ExPASy Swiss-Prot
Match: UREG2_SACEN (Urease accessory protein ureG 2 OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=ureG2 PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 9.749e-53
Identity = 107/184 (58.15%), Postives = 136/184 (73.91%), Query Frame = 1
Query:   88 PHSHEPIYSPGYFSRRAPPILSRNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEEL-SNLFKADLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLASAIGAD 636
            PH+H    +P   +R A P+     + RA  +G+GGPVG+GKTA + ALC+ LRD+ S+A VTNDI+T+ED +FL+R+  LP ERI AVETG CPH AIR+DIS NL  +E+L + +   DL+L ESGGDNL A FS+ L D  I++IDV+GGD IPRKGGPGIT ADLLVINKTDLA  +G+D
Sbjct:   12 PHAHLHSAAP---ARPADPVRPDG-SRRALRIGLGGPVGSGKTATVAALCRALRDRLSIAVVTNDIYTREDADFLLRHAILPAERILAVETGACPHTAIRDDISANLEAVEQLEATVGPLDLILVESGGDNLTATFSKGLVDAQIFVIDVAGGDDIPRKGGPGITTADLLVINKTDLAPHVGSD 191          
BLAST of CF836233 vs. ExPASy Swiss-Prot
Match: UREG_BURS3 (Urease accessory protein ureG OS=Burkholderia sp. (strain 383) GN=ureG PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.273e-52
Identity = 105/168 (62.50%), Postives = 125/168 (74.40%), Query Frame = 1
Query:  136 APPILSRNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLASAIGAD 636
            AP    R        VGIGGPVG+GKT L+  LCK +RD+Y L A+TNDI+TKED   L   GALPEERI  VETGGCPH AIRED SINL  ++ + + F  AD++  ESGGDNLAA FS EL+D  IY+IDV+GG+KIPRKGGPGIT++DLLVINKTDLA  +GA+
Sbjct:    5 APSSARRTKKLPPLRVGIGGPVGSGKTTLLEMLCKAMRDRYDLVAITNDIYTKEDQRLLTVAGALPEERIMGVETGGCPHTAIREDASINLEAVDRMLSRFPDADIVFIESGGDNLAATFSPELSDLTIYVIDVAGGEKIPRKGGPGITKSDLLVINKTDLAPLVGAN 172          
BLAST of CF836233 vs. ExPASy Swiss-Prot
Match: UREG_BURCH (Urease accessory protein ureG OS=Burkholderia cenocepacia (strain HI2424) GN=ureG PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.273e-52
Identity = 105/168 (62.50%), Postives = 125/168 (74.40%), Query Frame = 1
Query:  136 APPILSRNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLASAIGAD 636
            AP  + R        VGIGGPVG+GKT L+  LCK +RD+Y L A+TNDI+TKED   L   GALPEERI  VETGGCPH AIRED SINL  ++ +   F  AD++  ESGGDNLAA FS EL+D  IY+IDV+GG+KIPRKGGPGIT++DLLVINKTDLA  +GA+
Sbjct:    5 APSSIRRTKKLPPLRVGIGGPVGSGKTTLLEMLCKAMRDRYDLVAITNDIYTKEDQRLLTVAGALPEERIMGVETGGCPHTAIREDASINLEAVDRMLARFPDADIVFIESGGDNLAATFSPELSDLTIYVIDVAGGEKIPRKGGPGITKSDLLVINKTDLAPLVGAN 172          
BLAST of CF836233 vs. ExPASy Swiss-Prot
Match: UREG_BURCA (Urease accessory protein ureG OS=Burkholderia cenocepacia (strain AU 1054) GN=ureG PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.273e-52
Identity = 105/168 (62.50%), Postives = 125/168 (74.40%), Query Frame = 1
Query:  136 APPILSRNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLASAIGAD 636
            AP  + R        VGIGGPVG+GKT L+  LCK +RD+Y L A+TNDI+TKED   L   GALPEERI  VETGGCPH AIRED SINL  ++ +   F  AD++  ESGGDNLAA FS EL+D  IY+IDV+GG+KIPRKGGPGIT++DLLVINKTDLA  +GA+
Sbjct:    5 APSSIRRTKKLPPLRVGIGGPVGSGKTTLLEMLCKAMRDRYDLVAITNDIYTKEDQRLLTVAGALPEERIMGVETGGCPHTAIREDASINLEAVDRMLARFPDADIVFIESGGDNLAATFSPELSDLTIYVIDVAGGEKIPRKGGPGITKSDLLVINKTDLAPLVGAN 172          
BLAST of CF836233 vs. ExPASy Swiss-Prot
Match: UREG_PSEAE (Urease accessory protein ureG OS=Pseudomonas aeruginosa GN=ureG PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.663e-52
Identity = 103/152 (67.76%), Postives = 124/152 (81.58%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLASAIGA 633
            VGIGGPVG+GKTAL LALC+ LR++Y+LA VTNDI+T+ED EFL+RN AL  ERI  VETGGCPH AIRED SINL  +++L+  F   +L+L ESGGDNL+A FS EL+D  +Y+IDVS GDKIPRKGGPGI ++DLLVINK DLA  +GA
Sbjct:    8 VGIGGPVGSGKTALTLALCRELRERYNLAVVTNDIYTQEDAEFLVRNEALAPERIIGVETGGCPHTAIREDASINLEAVDQLNRRFPGLELILVESGGDNLSATFSPELSDLTLYVIDVSAGDKIPRKGGPGICKSDLLVINKIDLAPLVGA 159          
BLAST of CF836233 vs. ExPASy Swiss-Prot
Match: UREG_PSEAB (Urease accessory protein ureG OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=ureG PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.663e-52
Identity = 103/152 (67.76%), Postives = 124/152 (81.58%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLASAIGA 633
            VGIGGPVG+GKTAL LALC+ LR++Y+LA VTNDI+T+ED EFL+RN AL  ERI  VETGGCPH AIRED SINL  +++L+  F   +L+L ESGGDNL+A FS EL+D  +Y+IDVS GDKIPRKGGPGI ++DLLVINK DLA  +GA
Sbjct:    8 VGIGGPVGSGKTALTLALCRELRERYNLAVVTNDIYTQEDAEFLVRNEALAPERIIGVETGGCPHTAIREDASINLEAVDQLNRRFPGLELILVESGGDNLSATFSPELSDLTLYVIDVSAGDKIPRKGGPGICKSDLLVINKIDLAPLVGA 159          
BLAST of CF836233 vs. ExPASy Swiss-Prot
Match: UREG_PSEA8 (Urease accessory protein ureG OS=Pseudomonas aeruginosa (strain LESB58) GN=ureG PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.663e-52
Identity = 103/152 (67.76%), Postives = 124/152 (81.58%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLASAIGA 633
            VGIGGPVG+GKTAL LALC+ LR++Y+LA VTNDI+T+ED EFL+RN AL  ERI  VETGGCPH AIRED SINL  +++L+  F   +L+L ESGGDNL+A FS EL+D  +Y+IDVS GDKIPRKGGPGI ++DLLVINK DLA  +GA
Sbjct:    8 VGIGGPVGSGKTALTLALCRELRERYNLAVVTNDIYTQEDAEFLVRNEALAPERIIGVETGGCPHTAIREDASINLEAVDQLNRRFPGLELILVESGGDNLSATFSPELSDLTLYVIDVSAGDKIPRKGGPGICKSDLLVINKIDLAPLVGA 159          
BLAST of CF836233 vs. ExPASy Swiss-Prot
Match: UREG_BURCC (Urease accessory protein ureG OS=Burkholderia cenocepacia (strain MC0-3) GN=ureG PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.663e-52
Identity = 105/168 (62.50%), Postives = 125/168 (74.40%), Query Frame = 1
Query:  136 APPILSRNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLASAIGAD 636
            AP  + R        VGIGGPVG+GKT L+  LCK +RD+Y L A+TNDI+TKED   L   GALPEERI  VETGGCPH AIRED SINL  ++ +   F  AD++  ESGGDNLAA FS EL+D  IY+IDV+GG+KIPRKGGPGIT++DLLVINKTDLA  +GA+
Sbjct:    5 APSSVRRTKKLPPLRVGIGGPVGSGKTTLLEMLCKAMRDRYDLVAITNDIYTKEDQRLLTVAGALPEERIMGVETGGCPHTAIREDASINLEAVDRMLARFPDADIVFIESGGDNLAATFSPELSDLTIYVIDVAGGEKIPRKGGPGITKSDLLVINKTDLAPLVGAN 172          
BLAST of CF836233 vs. ExPASy Swiss-Prot
Match: UREG_ACIAD (Urease accessory protein ureG OS=Acinetobacter sp. (strain ADP1) GN=ureG PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.663e-52
Identity = 100/153 (65.36%), Postives = 124/153 (81.05%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLASAIGAD 636
            VGIGGPVG+GKTAL L LC+ LR+KY++A VTNDI+TKED  FL RN A+  +RI  VETGGCPH AIRED SINL  +++L   F   +L++ ESGGDNLAA FS EL+D  +Y+IDV+GG+KIPRKGGPGIT++DLL+INKTDLA  +GA+
Sbjct:    9 VGIGGPVGSGKTALTLNLCRALRNKYNMAVVTNDIYTKEDSNFLTRNEAMTPDRIVGVETGGCPHTAIREDASINLAAIDDLCEKFDGLELIIIESGGDNLAATFSPELSDLTLYVIDVAGGEKIPRKGGPGITKSDLLIINKTDLAPMVGAN 161          
BLAST of CF836233 vs. ExPASy Swiss-Prot
Match: UREG_BURP8 (Urease accessory protein ureG OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=ureG PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.172e-52
Identity = 104/168 (61.90%), Postives = 124/168 (73.81%), Query Frame = 1
Query:  136 APPILSRNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLASAIGAD 636
            AP  + R        VG+GGPVG+GKT L+  LCK +RDKY L A+TNDI+TKED   L   GALP ERI  VETGGCPH AIRED SINL  ++ +   F  AD++  ESGGDNLAA FS EL+D  IY+IDV+GG+KIPRKGGPGIT++DLLVINKTDLA  +GA+
Sbjct:    3 APHTMHRTKKLPPLRVGVGGPVGSGKTTLLEMLCKAMRDKYDLVAITNDIYTKEDQRLLTVAGALPAERIMGVETGGCPHTAIREDASINLEAVDRMLTRFPDADIVFIESGGDNLAATFSPELSDLTIYVIDVAGGEKIPRKGGPGITKSDLLVINKTDLAPMVGAN 170          
The following BLAST results are available for this feature:
BLAST of CF836233 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 254
Match NameE-valueIdentityDescription
UREG2_SACEN9.749e-5358.15Urease accessory protein ureG 2 OS=Saccharopolyspo... [more]
UREG_BURS31.273e-5262.50Urease accessory protein ureG OS=Burkholderia sp. ... [more]
UREG_BURCH1.273e-5262.50Urease accessory protein ureG OS=Burkholderia ceno... [more]
UREG_BURCA1.273e-5262.50Urease accessory protein ureG OS=Burkholderia ceno... [more]
UREG_PSEAE1.663e-5267.76Urease accessory protein ureG OS=Pseudomonas aerug... [more]
UREG_PSEAB1.663e-5267.76Urease accessory protein ureG OS=Pseudomonas aerug... [more]
UREG_PSEA81.663e-5267.76Urease accessory protein ureG OS=Pseudomonas aerug... [more]
UREG_BURCC1.663e-5262.50Urease accessory protein ureG OS=Burkholderia ceno... [more]
UREG_ACIAD1.663e-5265.36Urease accessory protein ureG OS=Acinetobacter sp.... [more]
UREG_BURP82.172e-5261.90Urease accessory protein ureG OS=Burkholderia phym... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02K03_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02K03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836233 ID=CF836233; Name=CF836233; organism=Citrus sinensis; type=EST; length=637bp
ACCCATGAAAAAAATCATGGTGATTCAACAGCAACATCATGGGTGGGGTC
AGACGGGAGGGTGTATCATAGCCATGATGGACTGGCGCCACACTCGCACG
AACCCATTTACTCTCCAGGCTATTTCAGCAGAAGAGCTCCGCCTATTCTC
AGCAGAAATTTCAATGAGAGAGCTTTTACCGTTGGCATTGGTGGCCCTGT
TGGTACTGGGAAAACAGCTTTAATGCTGGCTTTGTGTAAATTCTTGCGGG
ACAAGTACAGTCTTGCAGCTGTCACAAATGATATTTTCACAAAAGAAGAT
GGTGAATTCCTGATGCGGAATGGTGCTCTGCCTGAGGAGAGAATACGTGC
TGTGGAAACAGGTGGATGTCCTCATGCTGCAATTCGTGAAGACATCAGCA
TCAATCTGGGCCCTCTCGAGGAACTTTCTAACTTGTTCAAAGCAGACCTA
CTCCTTTGCGAATCTGGGGGAGATAATTTAGCTGCCAACTTCAGCAGGGA
ACTTGCAGACTATATCATTTATATAATAGACGTTTCTGGTGGTGATAAAA
TTCCTCGGAAAGGTGGCCCAGGCATCACCCAAGCTGACCTTCTGGTGATA
AACAAAACTGACCTTGCTTCAGCAATAGGAGCTGACT
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