CF836254 | Citrus Genome Database

Overview


Name	CF836254
Unique Name	CF836254
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	821

Libraries


Library Name	Type
Washington Navel Orange Shoot Meristem cDNA Library	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

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BLAST of CF836254 vs. ExPASy Swiss-Prot
Match: Y5148_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g61480 OS=Arabidopsis thaliana GN=At5g61480 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.487e-15
Identity = 52/141 (36.88%), Postives = 77/141 (54.61%), Query Frame = -2

Query:  257 RVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS-GPFEHIP-LNNFENNPRLEGPELLG 673
            R+  + L  + L G+L P LG L  LQ++E+  N+  G IP E   L +L   D+ N ++SG +P  L  L +L  L L  N  TG+IP     + SLK++D SSN L G+IP+     +++  L+   NN   E PE +G
Sbjct:  202 RLKFIHLAGNVLGGKLPPRLGLLTELQHMEIGYNHFNGNIPSEFALLSNLKYFDVSNCSLSGSLPQELGNLSNLETLFLFQNGFTGEIPESYSNLKSLKLLDFSSNQLSGSIPSGFSTLKNLTWLSLISNNLSGEVPEGIG 342

HSP 2 Score: 82.4185 bits (202), Expect = 3.313e-15
Identity = 65/223 (29.15%), Postives = 98/223 (43.95%), Query Frame = -2

Query:  230 ALYALRRSLSDPDNVLQSWDPTLVNP-----CTWFHITC-NQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSL-VF-----------------------LRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP------TSGPFEHIPLNNFENNPRLEGPELLGLASYD-TNCS 787
            +L +L+ SLS P +  Q W   +        C+W  + C N   +V  LDL + NLSGR+  ++  L  L YL L  N+++G+ P  + +L  L +LD+  N+     PP ++KLK L VF                       L    +   G+IP    G+  LK + ++ N L G +P      T      I  N+F  N   E   L  L  +D +NCS
Sbjct:   38 SLLSLKTSLSGPPSAFQDWKVPVNGQNDAVWCSWSGVVCDNVTAQVISLDLSHRNLSGRIPIQIRYLSSLLYLNLSGNSLEGSFPTSIFDLTKLTTLDISRNSFDSSFPPGISKLKFLKVFNAFSNNFEGLLPSDVSRLRFLEELNFGGSYFEGEIPAAYGGLQRLKFIHLAGNVLGGKLPPRLGLLTELQHMEIGYNHFNGNIPSEFALLSNLKYFDVSNCS 260

HSP 3 Score: 82.0333 bits (201), Expect = 4.327e-15
Identity = 45/124 (36.29%), Postives = 71/124 (57.26%), Query Frame = -2

Query:  299 DLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP----TSGPFEHIPLNN 658
            D+ N +LSG L  ELG L +L+ L L++N   G IP    NLKSL  LD  +N +SG IP   + LK+L +L L  N L+G++P  +  +  L  + + +N+  G +P    ++G  E + ++N
Sbjct:  255 DVSNCSLSGSLPQELGNLSNLETLFLFQNGFTGEIPESYSNLKSLKLLDFSSNQLSGSIPSGFSTLKNLTWLSLISNNLSGEVPEGIGELPELTTLFLWNNNFTGVLPHKLGSNGKLETMDVSN 378

HSP 4 Score: 72.4034 bits (176), Expect = 3.428e-12
Identity = 46/130 (35.38%), Postives = 74/130 (56.92%), Query Frame = -2

Query:  257 SNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFENNPRLEGPELLG 646
            SNL G  +P     +    +EL  N++ GTIP ++G+ + L+ L+L  N+++G IP  ++ L S+  + L+ N LTG IP +     ++   +VS N L G IP SG F H+  + F +N  L G +L+G
Sbjct:  499 SNLIGE-IPNYVGCKSFYRIELQGNSLNGTIPWDIGHCEKLLCLNLSQNHLNGIIPWEISTLPSIADVDLSHNLLTGTIPSDFGSSKTITTFNVSYNQLIGPIP-SGSFAHLNPSFFSSNEGLCG-DLVG 625

HSP 5 Score: 70.4774 bits (171), Expect = 1.303e-11
Identity = 45/129 (34.88%), Postives = 67/129 (51.94%), Query Frame = -2

Query:  287 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS-GPFEHIPLNNFENN 670
            +T L L ++NLSG +   +G+L  L  L L+ NN  G +P +LG+   L ++D+ NN+ +G IP SL     L  L L  N   G++P+ L    SL      +N L GTIP   G   ++   +  NN
Sbjct:  323 LTWLSLISNNLSGEVPEGIGELPELTTLFLWNNNFTGVLPHKLGSNGKLETMDVSNNSFTGTIPSSLCHGNKLYKLILFSNMFEGELPKSLTRCESLWRFRSQNNRLNGTIPIGFGSLRNLTFVDLSNN 451

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BLAST of CF836254 vs. ExPASy Swiss-Prot
Match: DR100_ARATH (DNA-damage-repair/toleration protein DRT100 OS=Arabidopsis thaliana GN=DRT100 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.487e-15
Identity = 54/160 (33.75%), Postives = 81/160 (50.62%), Query Frame = -2

Query:  263 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSL------------------------VFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFENNPRLEGPEL 670
            ++R+ LG + L+G +   +  +E L  L+L KN+I+G IP  +GN+K L  L+L  N+++G IP SL     L                        V L L+ N L+G+IP  L     +  +D+S N LCG IPT  PF+H+   +F +N  L G  L
Sbjct:  209 LSRVLLGRNELTGSIPESISGMERLADLDLSKNHIEGPIPEWMGNMKVLSLLNLDCNSLTGPIPGSLLSNSGLDVANLSRNALEGTIPDVFGSKTYLVSLDLSHNSLSGRIPDSLSSAKFVGHLDISHNKLCGRIPTGFPFDHLEATSFSDNQCLCGGPL 368

HSP 2 Score: 79.337 bits (194), Expect = 2.804e-14
Identity = 50/132 (37.88%), Postives = 69/132 (52.27%), Query Frame = -2

Query:  269 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPT-SGPFEHIPLNNFENNPRLEGP 661
            LDL  + ++G +  E+GKL  L  L L +N + G IP  L +L  L  L+L  N I+G IP     LK L  + L  N LTG IP  + G+  L  +D+S N + G IP   G  + + L N + N  L GP
Sbjct:  140 LDLAGNKITGEIPAEIGKLSKLAVLNLAENQMSGEIPASLTSLIELKHLELTENGITGVIPADFGSLKMLSRVLLGRNELTGSIPESISGMERLADLDLSKNHIEGPIPEWMGNMKVLSLLNLDCN-SLTGP 270

HSP 3 Score: 78.1814 bits (191), Expect = 6.248e-14
Identity = 66/233 (28.33%), Postives = 100/233 (42.92%), Query Frame = -2

Query:  236 ALYALRRSLSDPD-NVLQSWDPTLVNPCTWFHITCNQDN-RVTRLDLGNSN--------------------------------------LSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS-GPFEHIPLNNFENNPRLEGP--------ELLGLASYDTN 787
            AL A + SLS+P+  +  +W         W+ I+C+ D+ RVT + L   +                                      ++G + P +  L  L+ L+L  N I G IP E+G L  L  L+L  N +SG+IP SL  L  L  L L +N +TG IP +   +  L  V +  N+L G+IP S    E +   +   N  +EGP        ++L L + D N
Sbjct:   34 ALNAFKSSLSEPNLGIFNTWSENTDCCKEWYGISCDPDSGRVTDISLRGESEDAIFQKAGRSGYMSGSIDPAVCDLTALTSLVLADWKGITGEIPPCITSLASLRILDLAGNKITGEIPAEIGKLSKLAVLNLAENQMSGEIPASLTSLIELKHLELTENGITGVIPADFGSLKMLSRVLLGRNELTGSIPESISGMERLADLDLSKN-HIEGPIPEWMGNMKVLSLLNLDCN 265

HSP 4 Score: 73.9442 bits (180), Expect = 1.178e-12
Identity = 41/109 (37.61%), Postives = 62/109 (56.88%), Query Frame = -2

Query:  335 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 661
            L+L  + ++G +  + G L+ L  + L +N + G+IP  +  ++ L  LDL  N+I G IP  +  +K L  L L+ N LTG IP  L+  S L V ++S N L GTIP
Sbjct:  188 LELTENGITGVIPADFGSLKMLSRVLLGRNELTGSIPESISGMERLADLDLSKNHIEGPIPEWMGNMKVLSLLNLDCNSLTGPIPGSLLSNSGLDVANLSRNALEGTIP 296

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BLAST of CF836254 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.487e-15
Identity = 43/102 (42.16%), Postives = 63/102 (61.76%), Query Frame = -2

Query:  287 YLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFENN 592
            +L+L  N ++G+IP ELG +  L  L+L +N++SG IP  L  LK++  L L+ NR  G IP  L  ++ L  +D+S+N+L G IP S PF+  P   F NN
Sbjct:  667 FLDLSYNKLEGSIPKELGAMYYLSILNLGHNDLSGMIPQQLGGLKNVAILDLSYNRFNGTIPNSLTSLTLLGEIDLSNNNLSGMIPESAPFDTFPDYRFANN 768

HSP 2 Score: 77.0258 bits (188), Expect = 1.392e-13
Identity = 45/114 (39.47%), Postives = 68/114 (59.65%), Query Frame = -2

Query:  335 NRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 676
            +++  L L  + LSG +  EL  L+ L+ L L  N++ G IP  L N   L  + L NN +SG+IP SL +L +L  L+L +N ++G IP EL    SL  +D+++N L G+IP
Sbjct:  475 SKLKDLILWLNQLSGEIPQELMYLQALENLILDFNDLTGPIPASLSNCTKLNWISLSNNQLSGEIPASLGRLSNLAILKLGNNSISGNIPAELGNCQSLIWLDLNTNFLNGSIP 588

HSP 3 Score: 74.7146 bits (182), Expect = 6.907e-13
Identity = 45/117 (38.46%), Postives = 70/117 (59.83%), Query Frame = -2

Query:  329 RVTRLDLGNSNLSGRLVPELGK--LEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS 673
            ++  LD+ ++NL+G +   + K  + +L+ L L  N  +G IP  L N   L+SLDL  N ++G IP SL  L  L  L L  N+L+G+IP+EL+ + +L+ + +  NDL G IP S
Sbjct:  402 KLETLDMSSNNLTGIIPSGICKDPMNNLKVLYLQNNLFKGPIPDSLSNCSQLVSLDLSFNYLTGSIPSSLGSLSKLKDLILWLNQLSGEIPQELMYLQALENLILDFNDLTGPIPAS 518

HSP 4 Score: 72.4034 bits (176), Expect = 3.428e-12
Identity = 49/135 (36.30%), Postives = 79/135 (58.52%), Query Frame = -2

Query:  275 RVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNL-KSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRE-LVGISSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFENNPRLE 673
            +++ L+L N+   G LVP+L   E LQYL L  N+ QG  P +L +L K+++ LDL  NN SG +P SL +  SL  + +++N  +G++P + L+ +S++K + +S N   G +P S          F N P+LE
Sbjct:  282 KLSFLNLTNNQFVG-LVPKLPS-ESLQYLYLRGNDFQGVYPNQLADLCKTVVELDLSYNNFSGMVPESLGECSSLELVDISNNNFSGKLPVDTLLKLSNIKTMVLSFNKFVGGLPDS----------FSNLPKLE 404

HSP 5 Score: 70.8626 bits (172), Expect = 9.974e-12
Identity = 47/131 (35.88%), Postives = 67/131 (51.15%), Query Frame = -2

Query:  287 NRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS-GPFEHIPLNNFENN 676
            N +  L L N+   G +   L     L  L+L  N + G+IP  LG+L  L  L L+ N +SG+IP  L  L++L  L L+ N LTG IP  L   + L  + +S+N L G IP S G   ++ +    NN
Sbjct:  427 NNLKVLYLQNNLFKGPIPDSLSNCSQLVSLDLSFNYLTGSIPSSLGSLSKLKDLILWLNQLSGEIPQELMYLQALENLILDFNDLTGPIPASLSNCTKLNWISLSNNQLSGEIPASLGRLSNLAILKLGNN 557

HSP 6 Score: 69.3218 bits (168), Expect = 2.902e-11
Identity = 43/114 (37.72%), Postives = 65/114 (57.02%), Query Frame = -2

Query:  329 LDLGNSNLSGRL-VPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAK--LKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS 661
            +D+ N+N SG+L V  L KL +++ + L  N   G +P    NL  L +LD+ +NN++G IP  + K  + +L  L L +N   G IP  L   S L  +D+S N L G+IP+S
Sbjct:  357 VDISNNNFSGKLPVDTLLKLSNIKTMVLSFNKFVGGLPDSFSNLPKLETLDMSSNNLTGIIPSGICKDPMNNLKVLYLQNNLFKGPIPDSLSNCSQLVSLDLSFNYLTGSIPSS 470

[Close]

BLAST of CF836254 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.487e-15
Identity = 43/102 (42.16%), Postives = 63/102 (61.76%), Query Frame = -2

Query:  287 YLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFENN 592
            +L+L  N ++G+IP ELG +  L  L+L +N++SG IP  L  LK++  L L+ NR  G IP  L  ++ L  +D+S+N+L G IP S PF+  P   F NN
Sbjct:  667 FLDLSYNKLEGSIPKELGAMYYLSILNLGHNDLSGMIPQQLGGLKNVAILDLSYNRFNGTIPNSLTSLTLLGEIDLSNNNLSGMIPESAPFDTFPDYRFANN 768

HSP 2 Score: 77.0258 bits (188), Expect = 1.392e-13
Identity = 45/114 (39.47%), Postives = 68/114 (59.65%), Query Frame = -2

Query:  335 NRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 676
            +++  L L  + LSG +  EL  L+ L+ L L  N++ G IP  L N   L  + L NN +SG+IP SL +L +L  L+L +N ++G IP EL    SL  +D+++N L G+IP
Sbjct:  475 SKLKDLILWLNQLSGEIPQELMYLQALENLILDFNDLTGPIPASLSNCTKLNWISLSNNQLSGEIPASLGRLSNLAILKLGNNSISGNIPAELGNCQSLIWLDLNTNFLNGSIP 588

HSP 3 Score: 74.7146 bits (182), Expect = 6.907e-13
Identity = 45/117 (38.46%), Postives = 70/117 (59.83%), Query Frame = -2

Query:  329 RVTRLDLGNSNLSGRLVPELGK--LEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS 673
            ++  LD+ ++NL+G +   + K  + +L+ L L  N  +G IP  L N   L+SLDL  N ++G IP SL  L  L  L L  N+L+G+IP+EL+ + +L+ + +  NDL G IP S
Sbjct:  402 KLETLDMSSNNLTGVIPSGICKDPMNNLKVLYLQNNLFKGPIPDSLSNCSQLVSLDLSFNYLTGSIPSSLGSLSKLKDLILWLNQLSGEIPQELMYLQALENLILDFNDLTGPIPAS 518

HSP 4 Score: 72.7886 bits (177), Expect = 2.625e-12
Identity = 50/142 (35.21%), Postives = 73/142 (51.41%), Query Frame = -2

Query:  323 NPCTWFHI-------TCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCG---TIP-TSGP 715
            +PC +  +       T N +  +  LDL  + L G +  ELG + +L  L L  N++ G IP +LG LK++  LDL  N  +G IP SL  L  L  + L++N L+G IP E     +      ++N LCG    IP +SGP
Sbjct:  643 HPCNFTRVYRGITQPTFNHNGSMIFLDLSYNKLEGSIPKELGAMYYLSILNLGHNDLSGMIPQQLGGLKNVAILDLSYNRFNGTIPNSLTSLTLLGEIDLSNNNLSGMIP-ESAPFDTFPDYRFANNSLCGYPLPIPCSSGP 783

HSP 5 Score: 70.8626 bits (172), Expect = 9.974e-12
Identity = 47/131 (35.88%), Postives = 67/131 (51.15%), Query Frame = -2

Query:  287 NRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS-GPFEHIPLNNFENN 676
            N +  L L N+   G +   L     L  L+L  N + G+IP  LG+L  L  L L+ N +SG+IP  L  L++L  L L+ N LTG IP  L   + L  + +S+N L G IP S G   ++ +    NN
Sbjct:  427 NNLKVLYLQNNLFKGPIPDSLSNCSQLVSLDLSFNYLTGSIPSSLGSLSKLKDLILWLNQLSGEIPQELMYLQALENLILDFNDLTGPIPASLSNCTKLNWISLSNNQLSGEIPASLGRLSNLAILKLGNN 557

HSP 6 Score: 67.781 bits (164), Expect = 8.444e-11
Identity = 42/114 (36.84%), Postives = 64/114 (56.14%), Query Frame = -2

Query:  329 LDLGNSNLSGRL-VPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAK--LKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS 661
            +D+  +N SG+L V  L KL +++ + L  N   G +P    NL  L +LD+ +NN++G IP  + K  + +L  L L +N   G IP  L   S L  +D+S N L G+IP+S
Sbjct:  357 VDISYNNFSGKLPVDTLSKLSNIKTMVLSFNKFVGGLPDSFSNLLKLETLDMSSNNLTGVIPSGICKDPMNNLKVLYLQNNLFKGPIPDSLSNCSQLVSLDLSFNYLTGSIPSS 470

[Close]

BLAST of CF836254 vs. ExPASy Swiss-Prot
Match: PGIP_PYRCO (Polygalacturonase inhibitor OS=Pyrus communis GN=PGIP PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.942e-15
Identity = 59/179 (32.96%), Postives = 91/179 (50.84%), Query Frame = -2

Query:  329 LYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCNQD-NRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKN-------------------------NIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPREL-VGISSLKVVDVSSNDLCGTIPTS 784
            L  ++++  DP  VL SW     + C W+ +TC+   NR+  L +    +SG++   +G L +L+ LE +K                          N+ G++P  L  LK+L  LDL  NN++G IP SL++L +L  LRL+ N+LTG IP      I ++  + +S N L G IPTS
Sbjct:   35 LLQIKKAFGDP-YVLASWKSD-TDCCDWYCVTCDSTTNRINSLTIFAGQVSGQIPALVGDLPYLETLEFHKQPNLTGPIQPAIAKLKGLKSLRLSWTNLSGSVPDFLSQLKNLTFLDLSFNNLTGAIPSSLSELPNLGALRLDRNKLTGHIPISFGQFIGNVPDLYLSHNQLSGNIPTS 211

[Close]

BLAST of CF836254 vs. ExPASy Swiss-Prot
Match: Y5838_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana GN=At5g48380 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.536e-15
Identity = 57/182 (31.32%), Postives = 83/182 (45.60%), Query Frame = -2

Query:  263 DALYALRRSLSDPDNVLQSW---DPTLVNPCTWFHITC--NQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLIS-LDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFENNPRLEGPEL 790
            D L   +  + DP+  L +W   + T    C +  +TC  + +NRV  + L    L G   P +     L  L+L +NN  G +P  +  L  L++ LDL  N+ SG+IP  ++ +  L  L L  N+ TG +P +L  +  LK   VS N L G IP            F NN  L G  L
Sbjct:   33 DCLRTFKSQVEDPNRYLSTWVFGNETAGYICKFSGVTCWHDDENRVLSIKLSGYGLRGVFPPAVKLCADLTGLDLSRNNFSGPLPANISTLIPLVTILDLSYNSFSGEIPMLISNITFLNTLMLQHNQFTGTLPPQLAQLGRLKTFSVSDNRLVGPIPNFNQTLQFKQELFANNLDLCGKPL 214

[Close]

BLAST of CF836254 vs. ExPASy Swiss-Prot
Match: Y3868_ARATH (Probable inactive receptor kinase At3g08680 OS=Arabidopsis thaliana GN=At3g08680 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.536e-15
Identity = 62/180 (34.44%), Postives = 93/180 (51.67%), Query Frame = -2

Query:  287 SGNSEGDALYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCNQDN-RVTRLDLGNSNLSGRLVPE--LGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGP---FEHIPLNNFENN 808
            S + E D    L  +   P +   +W+ T+    +W  ITC+++N RVT L L  S L G L PE    KL+ L+ + L  N++QG IP  + +L  + SL  + NN SG IPP L+    LV L L+ N L+G IP  L  ++ L  + + +N L G IP   P   + ++  NN   +
Sbjct:   22 SADIESDKQALLEFASLVPHSRKLNWNSTIPICASWTGITCSKNNARVTALRLPGSGLYGPL-PEKTFEKLDALRIISLRSNHLQGNIPSVILSLPFIRSLYFHENNFSGTIPPVLS--HRLVNLDLSANSLSGNIPTSLQNLTQLTDLSLQNNSLSGPIPNLPPRLKYLNLSFNNLNGS 198

[Close]

BLAST of CF836254 vs. ExPASy Swiss-Prot
Match: PGIP1_ARATH (Polygalacturonase inhibitor 1 OS=Arabidopsis thaliana GN=PGIP1 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.536e-15
Identity = 58/186 (31.18%), Postives = 96/186 (51.61%), Query Frame = -2

Query:  329 SEGDALYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCNQ---DNRVTRLDLGN-------------------------SNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGI-SSLKVVDVSSNDLCGTIPTS 799
            ++ + L  +++SL++P + L SWDP   + C+W+ + C     ++RVT L + +                         SNL+G + P + KL++L+ L L   N+ G IP  +  LK+L  L+L  N++SG IP SL+ L  ++ L L+ N+LTG IP        ++  + +S N L G IP S
Sbjct:   28 NDKNTLLKIKKSLNNPYH-LASWDPQ-TDCCSWYCLECGDATVNHRVTALTIFSGQISGQIPAEVGDLPYLETLVFRKLSNLTGTIQPTIAKLKNLRMLRLSWTNLTGPIPDFISQLKNLEFLELSFNDLSGSIPSSLSTLPKILALELSRNKLTGSIPESFGSFPGTVPDLRLSHNQLSGPIPKS 211

[Close]

BLAST of CF836254 vs. ExPASy Swiss-Prot
Match: PGIP1_PHAVU (Polygalacturonase inhibitor 1 OS=Phaseolus vulgaris GN=PGIP1 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.313e-15
Identity = 59/184 (32.07%), Postives = 86/184 (46.74%), Query Frame = -2

Query:  335 ALYALRRSLSDPDNVLQSWDPTLVNPC--TWFHITCNQDN---RVTRLDL---------------------------GNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSL-KVVDVSSNDLCGTIP 787
            AL  +++ L +P   L SW PT  + C  TW  + C+ D    RV  LDL                           G +NL G + P + KL  L YL +   N+ G IP  L  +K+L++LD   N +SG +PPS++ L +L  +  + NR++G IP      S L   + +S N L G IP
Sbjct:   39 ALLQIKKDLGNP-TTLSSWLPT-TDCCNRTWLGVLCDTDTQTYRVNNLDLSGHNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLGGITFDGNRISGAIPDSYGSFSKLFTAMTISRNRLTGKIP 220

[Close]

BLAST of CF836254 vs. ExPASy Swiss-Prot
Match: IKU2_ARATH (Receptor-like protein kinase HAIKU2 OS=Arabidopsis thaliana GN=IKU2 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.327e-15
Identity = 51/125 (40.80%), Postives = 75/125 (60.00%), Query Frame = -2

Query:  317 NRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLK--VVDVSSNDLCGTIP---TSGPFE 676
            N +  ++L  +  SG +    GKL+ L  L L +NN+ G IP  LG   SL+ L+   N++S +IP SL  LK L  L L+ N+L+G IP   VG+S+LK  ++D+S+N L G++P    SG FE
Sbjct:  460 NSLVSVNLRMNKFSGIVPESFGKLKELSSLILDQNNLSGAIPKSLGLCTSLVDLNFAGNSLSEEIPESLGSLKLLNSLNLSGNKLSGMIP---VGLSALKLSLLDLSNNQLTGSVPESLVSGSFE 581

HSP 2 Score: 81.2629 bits (199), Expect = 7.380e-15
Identity = 46/136 (33.82%), Postives = 75/136 (55.15%), Query Frame = -2

Query:  335 RVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPV-----------------------ELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 673
            R+  L+L ++ +SG +  E+ +L++L+ LE+Y N++ G +P+                       EL  LK+L+SL ++ N ++G+IP      KSL  L L  N+LTG++PR L   ++ K +DVS N L G IP
Sbjct:  222 RLQNLELSDNQISGEIPKEIVQLKNLRQLEIYSNDLTGKLPLGFRNLTNLRNFDASNNSLEGDLSELRFLKNLVSLGMFENRLTGEIPKEFGDFKSLAALSLYRNQLTGKLPRRLGSWTAFKYIDVSENFLEGQIP 357

HSP 3 Score: 78.1814 bits (191), Expect = 6.248e-14
Identity = 49/138 (35.51%), Postives = 74/138 (53.62%), Query Frame = -2

Query:  257 RLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPF--EHIPLNNFENNPRLEGPELLG 664
            RL + N++LSG +   +  L +LQ+L+L  N  +G +  ++GN KSL SLDL NN  SG +P  ++   SLV + L  N+ +G +P     +  L  + +  N+L G IP S       + LN   N+   E PE LG
Sbjct:  392 RLRVSNNSLSGMIPSGIWGLPNLQFLDLASNYFEGNLTGDIGNAKSLGSLDLSNNRFSGSLPFQISGANSLVSVNLRMNKFSGIVPESFGKLKELSSLILDQNNLSGAIPKSLGLCTSLVDLNFAGNSLSEEIPESLG 529

HSP 4 Score: 75.8702 bits (185), Expect = 3.101e-13
Identity = 53/144 (36.81%), Postives = 70/144 (48.61%), Query Frame = -2

Query:  236 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFENNPRLEG--PELLGLASYDTN 661
            LDL N+  SG L  ++     L  + L  N   G +P   G LK L SL L  NN+SG IP SL    SLV L    N L+ +IP  L  +  L  +++S N L G IP       + L +  NN +L G  PE L   S++ N
Sbjct:  441 LDLSNNRFSGSLPFQISGANSLVSVNLRMNKFSGIVPESFGKLKELSSLILDQNNLSGAIPKSLGLCTSLVDLNFAGNSLSEEIPESLGSLKLLNSLNLSGNKLSGMIPVGLSALKLSLLDLSNN-QLTGSVPESLVSGSFEGN 583

HSP 5 Score: 75.485 bits (184), Expect = 4.050e-13
Identity = 54/163 (33.13%), Postives = 86/163 (52.76%), Query Frame = -2

Query:  272 NRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPV--------------------------ELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIP-LNNFE-NNPRLEG 676
            NR+  LDLG +N SG   P +  L+ L++L L  + I G  P                           E+ NL +L  + L N++I+GKIP  +  L  L  L L+DN+++G+IP+E+V + +L+ +++ SNDL G +P    F ++  L NF+ +N  LEG
Sbjct:  124 NRLRYLDLGINNFSGEF-PAIDSLQLLEFLSLNASGISGIFPWSSLKDLKRLSFLSVGDNRFGSHPFPREILNLTALQWVYLSNSSITGKIPEGIKNLVRLQNLELSDNQISGEIPKEIVQLKNLRQLEIYSNDLTGKLPLG--FRNLTNLRNFDASNNSLEG 283

HSP 6 Score: 68.1662 bits (165), Expect = 6.465e-11
Identity = 41/131 (31.30%), Postives = 64/131 (48.85%), Query Frame = -2

Query:  287 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPT------SGPFEHIPLNNFENN 661
            L +  + L+G +  E G  + L  L LY+N + G +P  LG+  +   +D+  N + G+IPP + K   +  L +  NR TGQ P       +L  + VS+N L G IP+      +  F  +  N FE N
Sbjct:  297 LGMFENRLTGEIPKEFGDFKSLAALSLYRNQLTGKLPRRLGSWTAFKYIDVSENFLEGQIPPYMCKKGVMTHLLMLQNRFTGQFPESYAKCKTLIRLRVSNNSLSGMIPSGIWGLPNLQFLDLASNYFEGN 427

The following BLAST results are available for this feature:

BLAST of CF836254 vs. ExPASy Swiss-Prot

BLAST of CF836254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113


Match Name	E-value	Identity	Description
Y5148_ARATH	1.487e-15	36.88	Probable leucine-rich repeat receptor-like protein...	[more]
DR100_ARATH	1.487e-15	33.75	DNA-damage-repair/toleration protein DRT100 OS=Ara...	[more]
BRI1_SOLPE	1.487e-15	42.16	Systemin receptor SR160 OS=Solanum peruvianum PE=1...	[more]
BRI1_SOLLC	1.487e-15	42.16	Brassinosteroid LRR receptor kinase OS=Solanum lyc...	[more]
PGIP_PYRCO	1.942e-15	32.96	Polygalacturonase inhibitor OS=Pyrus communis GN=P...	[more]
Y5838_ARATH	2.536e-15	31.32	Probably inactive leucine-rich repeat receptor-lik...	[more]
Y3868_ARATH	2.536e-15	34.44	Probable inactive receptor kinase At3g08680 OS=Ara...	[more]
PGIP1_ARATH	2.536e-15	31.18	Polygalacturonase inhibitor 1 OS=Arabidopsis thali...	[more]
PGIP1_PHAVU	3.313e-15	32.07	Polygalacturonase inhibitor 1 OS=Phaseolus vulgari...	[more]
IKU2_ARATH	4.327e-15	40.80	Receptor-like protein kinase HAIKU2 OS=Arabidopsis...	[more]

Pages

Properties


Property Name	Value
Genbank description	UCRCS03_02K18_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02K18, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF836254 ID=CF836254; Name=CF836254; organism=Citrus sinensis; type=EST; length=821bp
TTTTTTTTTTTTTTTTACATCTAAAATTCTCATCTTGAAAGTTGAACCTT
TTTTATGAAGATCACAACGACGCTATTACAGATGCATTTAAGCAGTATAA
TACAATTTACATATATGATGGCTTCATTTCACCAATAACACTACGCTTTT
TAGGTAAAGACGCTTTCGATCTTCGCGGACACATCTATTCGAAACCTGAG
TAGAGCTTGAAGCAACAATCAATCGTTTATGAGCAGTTTGTGTCATAACT
TGCAAGTCCCAGCAACTCTGGACCTTCTAATCGAGGGTTATTCTCAAAGT
TGTTGAGTGGGATGTGTTCAAATGGTCCGCTTGTAGGAATTGTTCCACAC
AGATCATTGCTTGAAACATCCACAACTTTGAGACTTGAAATTCCAACAAG
TTCCCTGGGAATTTGTCCAGTTAGCCGATTATCGTTAAGCCGCAAAAAAA
CAAGAGATTTCAATTTAGCCAAGGAAGGAGGGATTTTCCCCGAGATGTTG
TTATTATACAAGTCCAAGCTGATGAGGCTCTTCAAGTTACCGAGCTCGAC
AGGGATAGTTCCTTGGATGTTGTTTTTGTAAAGTTCCAGGTATTGCAAAT
GCTCGAGCTTGCCCAGTTCAGGGACGAGACGGCCGGATAGATTTGAATTA
CCCAAATCCAGTCGAGTAACGCGGTTGTCCTGATTACAGGTTATGTGAAA
CCAAGTGCAGGGATTGACGAGAGTTGGATCCCAGCTCTGAAGCACGTTAT
CGGGATCTGATAAGCTTCTCCTGAGCGCGTACAGCGCGTCCCCTTCCGAG
TTTCCACTCGCCACCGCCACC