CF836271

Overview
NameCF836271
Unique NameCF836271
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836271 vs. ExPASy Swiss-Prot
Match: CAPZB_CAEEL (F-actin-capping protein subunit beta OS=Caenorhabditis elegans GN=cap-2 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.721e-27
Identity = 64/139 (46.04%), Postives = 88/139 (63.31%), Query Frame = -1
Query:  309 YEGGISSVYMWEDDNEGFVACFLIKKDGSKTAQGRRRHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQMNMDLSVSEG--HLCTMGKMIEEMEGKLRNSLDQVYFGKTKEMVCTLR 719
            +EGG+SSVY W+ DN GF    LIKK+G             G WD+IHVIE+  E    A Y LTST+ML L T+  SSG  +L GS+ RQ  MD  +++   HL  MG+MIE+ E K+R +++++YFGKTK+++  LR
Sbjct:  112 FEGGVSSVYFWDLDNGGFAGIVLIKKEGDGAKN------ITGCWDSIHVIEIT-ERARQAHYKLTSTIMLWLQTNKSSSGVMNLGGSLTRQHEMDAPINDQNTHLANMGRMIEDQESKMRLTINEIYFGKTKKVMSDLR 243          
BLAST of CF836271 vs. ExPASy Swiss-Prot
Match: CAPZB_EMENI (F-actin-capping protein subunit beta OS=Emericella nidulans GN=cap2 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.539e-23
Identity = 60/139 (43.17%), Postives = 88/139 (63.31%), Query Frame = -1
Query:  309 YEGGISSVYMWEDDNEGFVACFLIKKDGSKTAQGRRRHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQMNMDLSVSE--GHLCTMGKMIEEMEGKLRNSLDQVYFGKTKEMVCTLR 719
            YEGG+ SVY W+ D +GF    L+KK  S   +        G WD+IHV E A +   +A Y LTSTV+L L+ ++E+ G   LSG++ RQ+ +D++V     H+  +GK++E+ME K+RN L +VYFGK K++V  LR
Sbjct:  112 YEGGVGSVYFWDLD-DGFAGVILLKKGVSPGGK------HSGEWDSIHVFE-ATDRGRMAHYKLTSTVILHLSNENEALGEMDLSGNMTRQIEVDMNVDSDASHVANVGKLVEDMELKMRNLLQEVYFGKAKDVVGELR 242          
BLAST of CF836271 vs. ExPASy Swiss-Prot
Match: CAPZB_ASPFU (F-actin-capping protein subunit beta OS=Aspergillus fumigatus GN=cap2 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.011e-23
Identity = 60/139 (43.17%), Postives = 87/139 (62.59%), Query Frame = -1
Query:  309 YEGGISSVYMWEDDNEGFVACFLIKKDGSKTAQGRRRHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQMNMDLSVSE--GHLCTMGKMIEEMEGKLRNSLDQVYFGKTKEMVCTLR 719
            YEGG+ SVY W+ D +GF    L+KK  +  A+        G WD+IHV E A +   ++ Y LTSTV+L L  ++E+ G   LSG++ RQM +DL V     H+  +G+++E+ME K+RN L +VYFGK K++V  LR
Sbjct:  149 YEGGVGSVYFWDLD-DGFAGVILLKKGVTPGAKS------SGEWDSIHVFE-ATDRARMSHYKLTSTVILHLANENEALGEMDLSGNMTRQMEVDLPVESDASHVANVGRLVEDMELKMRNLLQEVYFGKAKDVVGELR 279          
BLAST of CF836271 vs. ExPASy Swiss-Prot
Match: CAPZB_NEUCR (F-actin-capping protein subunit beta OS=Neurospora crassa GN=cap-2 PE=3 SV=3)

HSP 1 Score: 108.997 bits (271), Expect = 2.626e-23
Identity = 62/139 (44.60%), Postives = 82/139 (58.99%), Query Frame = -1
Query:  309 YEGGISSVYMWEDDNEGFVACFLIKKDGSKTAQGRRRHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQMNMDLSVS--EGHLCTMGKMIEEMEGKLRNSLDQVYFGKTKEMVCTLR 719
            YEGG+SSVY W  D +GF    L+KK               G WD+IHV E A E    + Y LTSTV+LSL T   + G   LSG++ RQ+  DL V   E H+  +G+++E+ME K+RN L +VYFGK K++V  LR
Sbjct:  134 YEGGVSSVYFWNLD-DGFAGVVLLKKSSPTNPSS------SGVWDSIHVFE-ASERGRTSNYRLTSTVILSLATKGNALGEVDLSGNMTRQVEQDLPVENDESHIANIGRLVEDMELKMRNLLQEVYFGKAKDVVGDLR 264          
BLAST of CF836271 vs. ExPASy Swiss-Prot
Match: CAPZB_GIBZE (F-actin-capping protein subunit beta OS=Gibberella zeae GN=CAP2 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.850e-23
Identity = 61/139 (43.88%), Postives = 84/139 (60.43%), Query Frame = -1
Query:  309 YEGGISSVYMWEDDNEGFVACFLIKKDGSKTAQGRRRHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQMNMDLSVS--EGHLCTMGKMIEEMEGKLRNSLDQVYFGKTKEMVCTLR 719
            YEGG+SSVY W  D +GF    L+KK   +          EG WD+IHV E A E      Y LTSTV+L+L+T   + G   LSG++ RQ+  DL V   + H+  +G+++E+ME K+RN L +VYFGK K++V  LR
Sbjct:  128 YEGGVSSVYFWNLD-DGFAGVVLLKKSSPQGGNS------EGVWDSIHVFE-AIERGRSTHYKLTSTVILTLSTSGGNLGEMDLSGNMTRQVEQDLPVENDDSHIANVGRLVEDMELKMRNLLQEVYFGKAKDVVGDLR 258          
BLAST of CF836271 vs. ExPASy Swiss-Prot
Match: CAPZB_ASPOR (F-actin-capping protein subunit beta OS=Aspergillus oryzae GN=cap2 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.850e-23
Identity = 60/139 (43.17%), Postives = 86/139 (61.87%), Query Frame = -1
Query:  309 YEGGISSVYMWEDDNEGFVACFLIKKDGSKTAQGRRRHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQMNMDLSVSE--GHLCTMGKMIEEMEGKLRNSLDQVYFGKTKEMVCTLR 719
            YEGG+ SVY W+ D +GF    L+KK  +  A+        G WD+IHV E A +   ++ Y LTSTV+L L  + ES G   LSG++ RQ+ +DL V     H+  +G+++E+ME K+RN L +VYFGK K++V  LR
Sbjct:  112 YEGGVGSVYFWDLD-DGFAGVILLKKGVTPGAKS------SGEWDSIHVFE-ATDRARMSHYKLTSTVILHLANETESLGEMDLSGNMTRQVEVDLPVESDASHVANVGRLVEDMELKMRNLLQEVYFGKAKDVVGELR 242          
BLAST of CF836271 vs. ExPASy Swiss-Prot
Match: CAPZB_SCHPO (F-actin-capping protein subunit beta OS=Schizosaccharomyces pombe GN=acp2 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.125e-19
Identity = 58/160 (36.25%), Postives = 87/160 (54.37%), Query Frame = -1
Query:  264 YEGGISSVYMWEDDNEGFVACFLIKKDGSKTAQGRRRHLEEGAWDAIHVIEVAPEEE-GIARYCLTSTVMLSLTTDHES-----SGTFSLSGSIRRQMNMDLSVSEG--HLCTMGKMIEEMEGKLRNSLDQVYFGKTKEMVCTLRPPFEVIMRLPDSTGL 719
            YEGG+SSVY+W+ D + +    LIKK  +  + G         WD+IHV E  P  E  +  Y LTST++L L++  E      S   +LSG + RQ +  L  ++    +  +GK++EEME ++RN L  VYFGKTK+++   R    V    P+ + L
Sbjct:  110 YEGGVSSVYLWDQD-DSYAGAVLIKKASTSNSSG---------WDSIHVFECLPTTETNVYDYRLTSTIILFLSSGSEEQSALPSKALNLSGHLTRQTSQRLPAADDDTEIANVGKLVEEMETRMRNFLQDVYFGKTKDIINQTRSIQPVSDAQPNDSAL 259          
BLAST of CF836271 vs. ExPASy Swiss-Prot
Match: CAPZB_YARLI (F-actin-capping protein subunit beta OS=Yarrowia lipolytica GN=CAP2 PE=3 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 9.665e-18
Identity = 55/144 (38.19%), Postives = 82/144 (56.94%), Query Frame = -1
Query:  309 YEGGISSVYMWE----DDNEGFVACFLIKKDGSKTAQGRRRHLEEGAWDAIHVIEVAPEE-EGIARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQMNMDLSVSEG--HLCTMGKMIEEMEGKLRNSLDQVYFGKTKEMVCTLR 719
            YEGG+SSVY+W+    D+   F    L+KK    ++           WD+IHV EV     EGI  Y +TSTV+L L +     G   LSG++ RQ   +++V E   H+  +G ++E++E KLRN L +VYFGK +++V  +R
Sbjct:  111 YEGGVSSVYLWDQGEGDNTNSFAGVVLLKKTSPSSS-----------WDSIHVFEVETSRGEGI--YRVTSTVILDLGSKSPKLG---LSGNLTRQTEREMAVDEPSQHIANLGSIVEDVESKLRNQLQEVYFGKARDIVGQVR 238          
BLAST of CF836271 vs. ExPASy Swiss-Prot
Match: CAPZB_DEBHA (F-actin-capping protein subunit beta OS=Debaryomyces hansenii GN=CAP2 PE=3 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 4.796e-17
Identity = 61/151 (40.40%), Postives = 81/151 (53.64%), Query Frame = -1
Query:  321 YEG-GISSVYMW----EDDNE-----GFVACFLIKKDGSKTAQGRRRHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQMNMD--------LSVSEGHLCTMGKMIEEMEGKLRNSLDQVYFGKTKEMV 719
            YEG G SSVY W    EDD +     GF    L KK+   T  G       G WD+IHVIEV PE    A Y +TS+V+L L   ++ S + SL+GS+ RQ+ +         L+V   HL  +G +IE+ E  LRN L  VYF K +++V
Sbjct:  128 YEGAGTSSVYFWDTNEEDDEQETLDNGFAGVVLFKKE---TEDG------SGKWDSIHVIEVIPEASSNATYKVTSSVILDL--QNKKSSSLSLAGSLTRQLELTQSLSLDSALNVETAHLINLGTLIEKSEYNLRNLLQDVYFDKLRDIV 267          
BLAST of CF836271 vs. ExPASy Swiss-Prot
Match: CAPZB_CANGA (F-actin-capping protein subunit beta OS=Candida glabrata GN=CAP2 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.396e-16
Identity = 53/139 (38.13%), Postives = 82/139 (58.99%), Query Frame = -1
Query:  324 YEGGISSVYMWEDDNEG-FVACFLIKKDGSKTAQGRRRHLEEGAWDAIHVIEVAP-EEEGIARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQMNMDLSVSEG-----HLCTMGKMIEEMEGKLRNSLDQVYFGKTKEM 719
            YEGGISSVY+W+ D EG F    L KK+GS           + +WD+IHVIE     ++    Y LTST++L+L  D++ + T SL+G++ RQ   +  +        H+  +G +IE++E +LR  L+ VYF KT+++
Sbjct:  117 YEGGISSVYLWDLDEEGEFAGVVLFKKEGSN----------KESWDSIHVIEATKGNDDETFTYRLTSTIILAL--DNKQNDT-SLAGNLTRQTEKEAKIDTSNTDISHITNLGTLIEDIESQLRTQLEIVYFEKTRDI 242          
The following BLAST results are available for this feature:
BLAST of CF836271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
CAPZB_CAEEL8.721e-2746.04F-actin-capping protein subunit beta OS=Caenorhabd... [more]
CAPZB_EMENI1.539e-2343.17F-actin-capping protein subunit beta OS=Emericella... [more]
CAPZB_ASPFU2.011e-2343.17F-actin-capping protein subunit beta OS=Aspergillu... [more]
CAPZB_NEUCR2.626e-2344.60F-actin-capping protein subunit beta OS=Neurospora... [more]
CAPZB_GIBZE5.850e-2343.88F-actin-capping protein subunit beta OS=Gibberella... [more]
CAPZB_ASPOR5.850e-2343.17F-actin-capping protein subunit beta OS=Aspergillu... [more]
CAPZB_SCHPO5.125e-1936.25F-actin-capping protein subunit beta OS=Schizosacc... [more]
CAPZB_YARLI9.665e-1838.19F-actin-capping protein subunit beta OS=Yarrowia l... [more]
CAPZB_DEBHA4.796e-1740.40F-actin-capping protein subunit beta OS=Debaryomyc... [more]
CAPZB_CANGA1.396e-1638.13F-actin-capping protein subunit beta OS=Candida gl... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02L06_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02L06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836271 ID=CF836271; Name=CF836271; organism=Citrus sinensis; type=EST; length=719bp
TTTTTTTTTTTTTTTTTATGAGAAAAACAACTTTTCCGTAAAAATGAGGT
TATACATCAAATGTGTCATCGAAGTTGTACCTGGTTGAAAAAAAGAAAAA
AAGGGGTAAAAGAAAAAATTGTCTGGGGAACAAGCAAAGCAAAATCCTAA
AGAAGGTTCAATCTATGACCGCGCGACCTTAAAACATATCAATGTCTGAA
ATGTGAGTACAGGACAAATGACTTTCATATCTCACTAACGAATGGAAGCA
TATCTCCTTTTCACAAGCCCGTACTGTCTGGCAGTCTCATTATCACTTCA
AATGGTGGTCGTAGGGTGCAAACCATTTCTTTCGTCTTCCCAAAATAAAC
CTGATCTAGTGAGTTCCTCAGTTTGCCCTCCATTTCTTCTATCATCTTTC
CCATGGTACAAAGATGGCCCTCTGAAACTGAGAGGTCCATATTCATCTGC
CGTCTAATTGATCCAGACAAACTGAATGTGCCTGATGACTCATGATCCGT
AGTCAAAGACAACATGACAGTACTAGTTAAACAATAACGAGCTATTCCTT
CTTCCTCTGGCGCCACTTCTATAACATGTATAGCATCCCAGGCTCCCTCT
TCCAAATGTCTCCTTCTTCCCTGTGCTGTCTTTGAACCATCTTTCTTTAT
CAAAAAGCAAGCTACAAATCCTTCATTATCATCTTCCCACATGTAAACTG
ATGAAATACCACCTTCATA
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