CF836273
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836273 vs. ExPASy Swiss-Prot
Match: TRPB_STRAW (Tryptophan synthase beta chain OS=Streptomyces avermitilis GN=trpB PE=3 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 5.260e-65 Identity = 120/192 (62.50%), Postives = 148/192 (77.08%), Query Frame = -2 Query: 185 PMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKY 760 P MVRDFH VIG E RRQ LE+ G PD +ACVGGGSNA+GLFH F+ D VRLIG E AG GL++G+HAATL+ GE G+LHG+ SY+LQD++GQI EP+SISAGLDYPG+GPEH++LKD GR EY VTDD A++A + SR EGIIPA+E+AHALA ++ L ++VN SGRGDKD+ TA +Y Sbjct: 211 PAMVRDFHRVIGVEARRQILERAGRLPDAAVACVGGGSNAIGLFHAFIPDTGVRLIGCEPAGHGLETGEHAATLTAGEPGILHGSRSYVLQDDEGQITEPYSISAGLDYPGIGPEHAYLKDSGRGEYRAVTDDAAMQALRLLSRTEGIIPAIESAHALAGALEIGKELGKDGLILVNLSGRGDKDMDTAARY 402
BLAST of CF836273 vs. ExPASy Swiss-Prot
Match: TRPB_STRGG (Tryptophan synthase beta chain OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=trpB PE=3 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 6.870e-65 Identity = 120/192 (62.50%), Postives = 148/192 (77.08%), Query Frame = -2 Query: 185 PMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKY 760 P MVRDFH VIG E RRQ LE+ G PD +ACVGGGSNA+GLFH F+ D+ VRL+G E AG G+++G+HAATL+ GE G+LHG+ SY+LQD++GQI EP+SISAGLDYPG+GPEHS+LKD GR EY VTDD A++A + SR EGIIPA+E+AHALA L L ++VN SGRGDKD+ TA +Y Sbjct: 211 PAMVRDFHRVIGVEARRQILERAGRLPDAAVACVGGGSNAIGLFHAFIPDEGVRLVGCEPAGHGVETGEHAATLTAGEPGILHGSRSYVLQDDEGQITEPYSISAGLDYPGIGPEHSYLKDVGRGEYRAVTDDAAMQALRLLSRTEGIIPAIESAHALAGALDLGKELGKDGLILVNLSGRGDKDMDTAARY 402
BLAST of CF836273 vs. ExPASy Swiss-Prot
Match: TRPB_CAUCR (Tryptophan synthase beta chain OS=Caulobacter crescentus GN=trpB PE=3 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 6.870e-65 Identity = 124/193 (64.25%), Postives = 147/193 (76.17%), Query Frame = -2 Query: 182 PMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYL 760 P+MVRDF +VIG E R Q LE G PD ++AC+GGGSNA+GLFH F+ D+ VRLIGVEAAG G+ + KHAA+L+ G GVLHG +YLLQD+DGQII+ HSISAGLDYPG+GPEHSFL D GRAEY + TD EALEAFK S LEGIIPALE AHALA + ++ L G VV+N GRGDKD+ T + L Sbjct: 210 PVMVRDFQSVIGAEAREQILEMEGRLPDAVVACIGGGSNAIGLFHPFLGDEGVRLIGVEAAGHGVSTDKHAASLTGGRPGVLHGNRTYLLQDDDGQIIDAHSISAGLDYPGIGPEHSFLHDIGRAEYVSTTDTEALEAFKLCSTLEGIIPALEPAHALARVGEIAQELGKGKIVVMNLCGRGDKDIFTVAEAL 402
BLAST of CF836273 vs. ExPASy Swiss-Prot
Match: TRPB_DECAR (Tryptophan synthase beta chain OS=Dechloromonas aromatica (strain RCB) GN=trpB PE=3 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 8.972e-65 Identity = 122/188 (64.89%), Postives = 149/188 (79.26%), Query Frame = -2 Query: 197 PMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQT 760 PM+VRDF +IG+E Q E G +PD +IACVGGGSNAMG+F+ ++N + VRLIGVEAAG G+++G+H+A+L+ G GVLHG +YLLQDEDGQIIE HS+SAGLDYPGVGPEH++LKD GRAEY VTD EAL AF R+EGIIPALE++HALAY KL PTLA ++VN SGRGDKD+ T Sbjct: 203 PMLVRDFQKIIGEECLVQMPEMTGRQPDAVIACVGGGSNAMGIFYPYINVEGVRLIGVEAAGDGMETGRHSASLTAGVPGVLHGNRTYLLQDEDGQIIETHSVSAGLDYPGVGPEHAWLKDLGRAEYQPVTDSEALAAFHTLCRIEGIIPALESSHALAYAAKLAPTLAKDKILLVNLSGRGDKDMHT 390
BLAST of CF836273 vs. ExPASy Swiss-Prot
Match: TRPB_ACICA (Tryptophan synthase beta chain OS=Acinetobacter calcoaceticus GN=trpB PE=3 SV=2) HSP 1 Score: 246.899 bits (629), Expect = 8.972e-65 Identity = 115/191 (60.21%), Postives = 149/191 (78.01%), Query Frame = -2 Query: 188 PMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIK 760 P +VRDF ++IG+E RRQ E+ G PD L+ACVGGGSNA+GLF+ F+ND+DV++ GVEAAG G+++GKH+A L+ G VGVLHG +YL+ D GQIIE HSISAGLDYPGVGPEHSFLKD R EY + D+EAL+ F+ +R+EGIIPA+E+AHA+AY+ KL PT+ ++ N SGRGDKD+ T + Sbjct: 204 PQLVRDFQSIIGREARRQIQEQAGRLPDALVACVGGGSNAIGLFYPFLNDQDVKMYGVEAAGHGIETGKHSAPLNAGHVGVLHGNRTYLMSDPQGQIIETHSISAGLDYPGVGPEHSFLKDMHRVEYVPIDDNEALQGFRDLTRIEGIIPAIESAHAMAYVTKLAPTMDKDQIIIANVSGRGDKDLMTVAR 394
BLAST of CF836273 vs. ExPASy Swiss-Prot
Match: TRPB_ACIAD (Tryptophan synthase beta chain OS=Acinetobacter sp. (strain ADP1) GN=trpB PE=3 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 8.972e-65 Identity = 115/191 (60.21%), Postives = 149/191 (78.01%), Query Frame = -2 Query: 188 PMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIK 760 P +VRDF ++IG+E RRQ E+ G PD L+ACVGGGSNA+GLF+ F+ND+DV++ GVEAAG G+++GKH+A L+ G VGVLHG +YL+ D GQIIE HSISAGLDYPGVGPEHSFLKD R EY + D+EAL+ F+ +R+EGIIPA+E+AHA+AY+ KL PT+ ++ N SGRGDKD+ T + Sbjct: 204 PQLVRDFQSIIGREARRQIQEQAGRLPDALVACVGGGSNAIGLFYPFLNDQDVKMYGVEAAGHGIETGKHSAPLNAGHVGVLHGNRTYLMSDPQGQIIETHSISAGLDYPGVGPEHSFLKDMHRVEYVPIDDNEALQGFRDLTRIEGIIPAIESAHAMAYVTKLAPTMDKDQIIIANVSGRGDKDLMTVAR 394
BLAST of CF836273 vs. ExPASy Swiss-Prot
Match: TRPB_NITMU (Tryptophan synthase beta chain OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=trpB PE=3 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 1.172e-64 Identity = 118/191 (61.78%), Postives = 150/191 (78.53%), Query Frame = -2 Query: 188 PMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIK 760 PMMVRDF A+IG+E Q E +G +PD LIACVGGGSNA+GLF+ ++ D +R+IGVEAAG G+++ +HAATL+KG GVLHG +YL+QDE+GQI+E HSISAGLDYPGVGPEH++LKD GRAEY+ +TD++ALEAF EGIIPALE++HALAY +L P L ++VN SGRGDKD+ T + Sbjct: 203 PMMVRDFQAIIGREAITQMQEDYGRQPDALIACVGGGSNAIGLFYPYL-DSSIRMIGVEAAGHGVETDQHAATLTKGRPGVLHGNRTYLIQDENGQIVETHSISAGLDYPGVGPEHAWLKDSGRAEYFGITDEQALEAFHALCHYEGIIPALESSHALAYAARLAPALTSDKLLLVNLSGRGDKDMPTVAR 392
BLAST of CF836273 vs. ExPASy Swiss-Prot
Match: TRPB_PSESH (Tryptophan synthase beta chain OS=Pseudomonas syringae pv. phaseolicola GN=trpB PE=3 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 1.999e-64 Identity = 123/193 (63.73%), Postives = 146/193 (75.65%), Query Frame = -2 Query: 182 PMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYL 760 P MVRDF A+IGKET+ Q EK G PD LIACVGGGSNAMGLFH F++D V +IGVEA G G+D+ KHAA+L+ G GVLHG +YLLQD DGQI +PHSISAGLDYPG+GPEH+FL + R EY ++TDDEAL+AF + LEGIIPALETAHALA K L D +VV SGRGDKD+QT + ++ Sbjct: 206 PAMVRDFQAIIGKETKEQMQEKEGRLPDSLIACVGGGSNAMGLFHPFLDDASVEIIGVEAGGHGVDTDKHAASLNGGVPGVLHGNRTYLLQDGDGQITDPHSISAGLDYPGIGPEHAFLHEVKRVEYVSITDDEALDAFHQCCLLEGIIPALETAHALAEAMKRATNLRDDHLMVVCLSGRGDKDMQTVMNHM 398
BLAST of CF836273 vs. ExPASy Swiss-Prot
Match: TRPB1_PYRKO (Tryptophan synthase beta chain 1 OS=Pyrococcus kodakaraensis GN=trpB1 PE=3 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 1.999e-64 Identity = 119/186 (63.98%), Postives = 147/186 (79.03%), Query Frame = -2 Query: 203 PMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDV 760 P++VRDF +VIG+E R Q LE G PD ++ACVGGGSNAMG+F+ FVND+ VRLIGVEA G GL++G HAA+L+ GE+GV HG LSY LQ+E+GQI HS+SAGLDYPGVGPEH++LKD GRAEY VTD+EAL AF SR EGI+PALE+AHA+AY K+ P + ++VN SGRGDKD+ Sbjct: 196 PVIVRDFQSVIGREAREQILEAEGTLPDAVVACVGGGSNAMGIFYPFVNDR-VRLIGVEAGGKGLETGLHAASLNAGELGVFHGMLSYFLQNEEGQITPTHSVSAGLDYPGVGPEHAYLKDSGRAEYVTVTDEEALRAFHELSRTEGILPALESAHAVAYAMKIAPEMDKDEIIIVNLSGRGDKDL 380
BLAST of CF836273 vs. ExPASy Swiss-Prot
Match: TRPB_BACC3 (Tryptophan synthase beta chain OS=Bacillus cereus (strain 03BB102) GN=trpB PE=3 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 2.610e-64 Identity = 117/194 (60.31%), Postives = 155/194 (79.90%), Query Frame = -2 Query: 179 PMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQ 760 P +VRDF +VIG ET++Q E G P+ ++AC+GGGSNAMG+F+ FV+D++V L GVEAAG G+ + KHAATL+KG VGVLHG++ YLLQ+E+GQI E HSISAGLDYPGVGPEHS LKD GR Y+++TDDEALEAF+ ++ EGIIPALE++HA+AY KL P + + +V+ SGRGDKDV++ +Y++ Sbjct: 202 PQIVRDFQSVIGNETKKQYEELEGKLPEAVVACIGGGSNAMGMFYPFVHDEEVALYGVEAAGKGVHTEKHAATLTKGSVGVLHGSMMYLLQNEEGQIQEAHSISAGLDYPGVGPEHSLLKDIGRVSYHSITDDEALEAFQLLTKKEGIIPALESSHAVAYALKLAPQMKEDEGLVICLSGRGDKDVESIKRYME 395 The following BLAST results are available for this feature:
BLAST of CF836273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 449
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836273 ID=CF836273; Name=CF836273; organism=Citrus sinensis; type=EST; length=761bpback to top |