CF836273
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836273 vs. ExPASy Swiss-Prot
Match: TRPB_BACAH (Tryptophan synthase beta chain OS=Bacillus thuringiensis (strain Al Hakam) GN=trpB PE=3 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 2.610e-64 Identity = 117/194 (60.31%), Postives = 155/194 (79.90%), Query Frame = -2 Query: 179 PMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQ 760 P +VRDF +VIG ET++Q E G P+ ++AC+GGGSNAMG+F+ FV+D++V L GVEAAG G+ + KHAATL+KG VGVLHG++ YLLQ+E+GQI E HSISAGLDYPGVGPEHS LKD GR Y+++TDDEALEAF+ ++ EGIIPALE++HA+AY KL P + + +V+ SGRGDKDV++ +Y++ Sbjct: 202 PQIVRDFQSVIGNETKKQYEELEGKLPEAVVACIGGGSNAMGMFYPFVHDEEVALYGVEAAGKGVHTEKHAATLTKGSVGVLHGSMMYLLQNEEGQIQEAHSISAGLDYPGVGPEHSLLKDIGRVSYHSITDDEALEAFQLLTKKEGIIPALESSHAVAYALKLAPQMKEDEGLVICLSGRGDKDVESIKRYME 395
BLAST of CF836273 vs. ExPASy Swiss-Prot
Match: TRPB1_PYRFU (Tryptophan synthase beta chain 1 OS=Pyrococcus furiosus GN=trpB1 PE=1 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 2.610e-64 Identity = 119/191 (62.30%), Postives = 148/191 (77.49%), Query Frame = -2 Query: 188 PMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIK 760 P +VRDF +VIG+E + Q LE G PDV++ACVGGGSNAMG+F+ FVNDK V+L+GVEA G GL+SGKH+A+L+ G+VGV HG LSY LQDE+GQI HSI+ GLDYPGVGPEH++LK RAEY VTD+EAL+AF SR EGIIPALE+AHA+AY KL ++ ++VN SGRGDKD+ +K Sbjct: 193 PTIVRDFQSVIGREAKAQILEAEGQLPDVIVACVGGGSNAMGIFYPFVNDKKVKLVGVEAGGKGLESGKHSASLNAGQVGVFHGMLSYFLQDEEGQIKPTHSIAPGLDYPGVGPEHAYLKKIQRAEYVTVTDEEALKAFHELSRTEGIIPALESAHAVAYAMKLAKEMSRDEIIIVNLSGRGDKDLDIVLK 383
BLAST of CF836273 vs. ExPASy Swiss-Prot
Match: TRPB_BACCZ (Tryptophan synthase beta chain OS=Bacillus cereus (strain ZK / E33L) GN=trpB PE=3 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 3.409e-64 Identity = 117/194 (60.31%), Postives = 155/194 (79.90%), Query Frame = -2 Query: 179 PMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQ 760 P +VRDF +VIGKET++Q G P+ ++AC+GGGSNAMG+F+ FV+D++V L GVEAAG G+ + KHAATL+KG VGVLHG++ YLLQ+E+GQI E HSISAGLDYPGVGPEHS LKD GR Y+++TDDEALEAF+ ++ EGIIPALE++HA+AY KL P + + +V+ SGRGDKDV++ +Y++ Sbjct: 202 PQIVRDFQSVIGKETKKQYEALEGKLPEAVVACIGGGSNAMGMFYPFVHDEEVALYGVEAAGKGVHTEKHAATLTKGSVGVLHGSMMYLLQNEEGQIQEAHSISAGLDYPGVGPEHSLLKDIGRVSYHSITDDEALEAFQLLTKKEGIIPALESSHAVAYALKLAPKMKEDEGLVICLSGRGDKDVESIKRYME 395
BLAST of CF836273 vs. ExPASy Swiss-Prot
Match: TRPB_THIDA (Tryptophan synthase beta chain OS=Thiobacillus denitrificans (strain ATCC 25259) GN=trpB PE=3 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 7.595e-64 Identity = 119/191 (62.30%), Postives = 145/191 (75.92%), Query Frame = -2 Query: 188 PMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIK 760 PM+VRDF VIG+E Q E G +PD ++ACVGGGSNA+G+FH ++ ++VRLIGVEA G G+ SGKHAA L+ G GVLHG SYL+QDE+GQIIE HS+SAGLDYPGVGPEHS+LKD GRAEY + DDEAL AF R EGIIPALE++HA+A +KL PT+ ++VN SGRGDKD+ T K Sbjct: 203 PMLVRDFQCVIGRECIAQMPELVGRQPDAVVACVGGGSNAIGIFHPYIPHENVRLIGVEAGGSGVASGKHAAPLTAGTPGVLHGFRSYLMQDENGQIIETHSVSAGLDYPGVGPEHSYLKDAGRAEYVPINDDEALAAFHDLCRFEGIIPALESSHAVAQAKKLAPTMKKDQVILVNLSGRGDKDINTVAK 393
BLAST of CF836273 vs. ExPASy Swiss-Prot
Match: TRPB_RHILO (Tryptophan synthase beta chain OS=Rhizobium loti GN=trpB PE=3 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 7.595e-64 Identity = 119/193 (61.66%), Postives = 148/193 (76.68%), Query Frame = -2 Query: 182 PMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYL 760 P +VRDF +VIG E R Q LE+ G PD +IA VGGGSNA+GLFH F++DKDVR+IG+EA G GLD +H A+++ G GVLHG +YLLQ+ DGQI++ HSISAGLDYPGVGPEHS+L+D GR EY + DDEALEAFK ++R+EGIIPALE+AHA+A+ K+ P + V+VN SGRGDKDV T L Sbjct: 220 PELVRDFQSVIGTEARAQILEQEGRLPDTIIAAVGGGSNAIGLFHPFLDDKDVRIIGIEAGGRGLDGIEHCASMNAGSPGVLHGNRTYLLQNADGQIMDGHSISAGLDYPGVGPEHSWLRDSGRVEYVPILDDEALEAFKLTTRVEGIIPALESAHAIAHAVKIVPAMDKDQIVIVNLSGRGDKDVHTVASML 412
BLAST of CF836273 vs. ExPASy Swiss-Prot
Match: TRPB_PHEZH (Tryptophan synthase beta chain OS=Phenylobacterium zucineum (strain HLK1) GN=trpB PE=3 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 7.595e-64 Identity = 120/193 (62.18%), Postives = 146/193 (75.65%), Query Frame = -2 Query: 182 PMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYL 760 PMMVRDF AVIG+ETR Q LE G PD L+ACVGGGSNA+GLFH F+ND V++ GVEAAG G+++G+HAA ++ G GVLHG ++YLLQD GQI E HSISAGLDYPG+GPEH++L D GRA Y TD EALEAF+ S LEGI+PA+E++HALA L ++ + VV+N SGRGDKDV T YL Sbjct: 210 PMMVRDFQAVIGRETREQILELEGRLPDALVACVGGGSNAIGLFHPFLNDSSVKIFGVEAAGEGVETGRHAAAINGGRPGVLHGNMTYLLQDRVGQIEEAHSISAGLDYPGIGPEHAWLHDVGRATYLTATDTEALEAFRLLSELEGILPAIESSHALARLPEITREVGKDGIVVLNLSGRGDKDVNTVASYL 402
BLAST of CF836273 vs. ExPASy Swiss-Prot
Match: TRPB_BACHK (Tryptophan synthase beta chain OS=Bacillus thuringiensis subsp. konkukian GN=trpB PE=3 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.296e-63 Identity = 116/194 (59.79%), Postives = 154/194 (79.38%), Query Frame = -2 Query: 179 PMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQ 760 P +VRDF +VIG ET++Q G P+ ++AC+GGGSNAMG+F+ FV+D++V L GVEAAG G+ + KHAATL+KG VGVLHG++ YLLQ+E+GQI E HSISAGLDYPGVGPEHS LKD GR Y+++TDDEALEAF+ ++ EGIIPALE++HA+AY KL P + + +V+ SGRGDKDV++ +Y++ Sbjct: 202 PQIVRDFQSVIGNETKKQYEALEGKLPEAVVACIGGGSNAMGMFYPFVHDEEVALYGVEAAGKGVHTEKHAATLTKGSVGVLHGSMMYLLQNEEGQIQEAHSISAGLDYPGVGPEHSLLKDIGRVSYHSITDDEALEAFQLLTKKEGIIPALESSHAVAYALKLAPQMKEDEGLVICLSGRGDKDVESIKRYME 395
BLAST of CF836273 vs. ExPASy Swiss-Prot
Match: TRPB_BACAN (Tryptophan synthase beta chain OS=Bacillus anthracis GN=trpB PE=3 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.296e-63 Identity = 116/194 (59.79%), Postives = 154/194 (79.38%), Query Frame = -2 Query: 179 PMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQ 760 P +VRDF +VIG ET++Q G P+ ++AC+GGGSNAMG+F+ FV+D++V L GVEAAG G+ + KHAATL+KG VGVLHG++ YLLQ+E+GQI E HSISAGLDYPGVGPEHS LKD GR Y+++TDDEALEAF+ ++ EGIIPALE++HA+AY KL P + + +V+ SGRGDKDV++ +Y++ Sbjct: 202 PQIVRDFQSVIGNETKKQYEALEGKLPEAVVACIGGGSNAMGMFYPFVHDEEVALYGVEAAGKGVHTEKHAATLTKGSVGVLHGSMMYLLQNEEGQIQEAHSISAGLDYPGVGPEHSLLKDIGRVSYHSITDDEALEAFQLLTKKEGIIPALESSHAVAYALKLAPQMKEDEGLVICLSGRGDKDVESIKRYME 395
BLAST of CF836273 vs. ExPASy Swiss-Prot
Match: TRPB_BACAC (Tryptophan synthase beta chain OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=trpB PE=3 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.296e-63 Identity = 116/194 (59.79%), Postives = 154/194 (79.38%), Query Frame = -2 Query: 179 PMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQ 760 P +VRDF +VIG ET++Q G P+ ++AC+GGGSNAMG+F+ FV+D++V L GVEAAG G+ + KHAATL+KG VGVLHG++ YLLQ+E+GQI E HSISAGLDYPGVGPEHS LKD GR Y+++TDDEALEAF+ ++ EGIIPALE++HA+AY KL P + + +V+ SGRGDKDV++ +Y++ Sbjct: 202 PQIVRDFQSVIGNETKKQYEALEGKLPEAVVACIGGGSNAMGMFYPFVHDEEVALYGVEAAGKGVHTEKHAATLTKGSVGVLHGSMMYLLQNEEGQIQEAHSISAGLDYPGVGPEHSLLKDIGRVSYHSITDDEALEAFQLLTKKEGIIPALESSHAVAYALKLAPQMKEDEGLVICLSGRGDKDVESIKRYME 395
BLAST of CF836273 vs. ExPASy Swiss-Prot
Match: TRPB_BACAA (Tryptophan synthase beta chain OS=Bacillus anthracis (strain A0248) GN=trpB PE=3 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.296e-63 Identity = 116/194 (59.79%), Postives = 154/194 (79.38%), Query Frame = -2 Query: 179 PMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQ 760 P +VRDF +VIG ET++Q G P+ ++AC+GGGSNAMG+F+ FV+D++V L GVEAAG G+ + KHAATL+KG VGVLHG++ YLLQ+E+GQI E HSISAGLDYPGVGPEHS LKD GR Y+++TDDEALEAF+ ++ EGIIPALE++HA+AY KL P + + +V+ SGRGDKDV++ +Y++ Sbjct: 202 PQIVRDFQSVIGNETKKQYEALEGKLPEAVVACIGGGSNAMGMFYPFVHDEEVALYGVEAAGKGVHTEKHAATLTKGSVGVLHGSMMYLLQNEEGQIQEAHSISAGLDYPGVGPEHSLLKDIGRVSYHSITDDEALEAFQLLTKKEGIIPALESSHAVAYALKLAPQMKEDEGLVICLSGRGDKDVESIKRYME 395 The following BLAST results are available for this feature:
BLAST of CF836273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 449
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836273 ID=CF836273; Name=CF836273; organism=Citrus sinensis; type=EST; length=761bpback to top |