CF836273
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836273 vs. ExPASy Swiss-Prot
Match: TRPB_PSE14 (Tryptophan synthase beta chain OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=trpB PE=3 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 1.692e-63 Identity = 122/193 (63.21%), Postives = 145/193 (75.13%), Query Frame = -2 Query: 182 PMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYL 760 P MVRDF A+IGKET+ Q EK G PD LIACVGGGSNAMGLFH F++D V +IGVEA G G+D+ KHAA+L+ G GVLHG +YLLQD DGQI + HSISAGLDYPG+GPEH+FL + R EY ++TDDEAL+AF + LEGIIPALETAHALA K L D +VV SGRGDKD+QT + ++ Sbjct: 206 PAMVRDFQAIIGKETKEQMQEKEGRLPDSLIACVGGGSNAMGLFHPFLDDASVEIIGVEAGGHGVDTDKHAASLNGGVPGVLHGNRTYLLQDGDGQITDAHSISAGLDYPGIGPEHAFLHEVKRVEYVSITDDEALDAFHQCCLLEGIIPALETAHALAEAMKRATNLRDDHLMVVCLSGRGDKDMQTVMNHM 398
BLAST of CF836273 vs. ExPASy Swiss-Prot
Match: TRPB_RUTMC (Tryptophan synthase beta chain OS=Ruthia magnifica subsp. Calyptogena magnifica GN=trpB PE=3 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 2.210e-63 Identity = 117/190 (61.58%), Postives = 147/190 (77.37%), Query Frame = -2 Query: 197 PMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGK--HAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQT 760 PMMVRDF ++IGKET+ Q + GG PDVL+ACVGGGSNA+GLFH F++D V + GVEAAG+GL+ G H+A L G VGVLHG +YL++DE+GQIIE HSISAGLDYPGVGPEH++LKD GRA Y +TD EALEAF +++EGI+PALE++HA+AY KL L +++N SGRGDKD+ T Sbjct: 203 PMMVRDFQSIIGKETKVQFAAQVGGLPDVLVACVGGGSNAIGLFHAFIDDASVEIYGVEAAGYGLEKGPTAHSAPLCAGSVGVLHGNRTYLMEDENGQIIEGHSISAGLDYPGVGPEHAYLKDSGRARYVAITDKEALEAFHVLTKVEGILPALESSHAVAYGIKLAKELGKDKHIIINLSGRGDKDIHT 392
BLAST of CF836273 vs. ExPASy Swiss-Prot
Match: TRPB_PSEU2 (Tryptophan synthase beta chain OS=Pseudomonas syringae pv. syringae (strain B728a) GN=trpB PE=3 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 2.210e-63 Identity = 121/193 (62.69%), Postives = 145/193 (75.13%), Query Frame = -2 Query: 182 PMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYL 760 P MVRDF A+IGKET+ Q LEK G PD L+ACVGGGSNAMGLFH F++D V +IGVEA G G+ + KHAA+L+ G GVLHG +YLLQD DGQI + HSISAGLDYPG+GPEH+FL + R EY ++TDDEAL+AF + LEGIIPALETAHALA K L D +VV SGRGDKD+QT + ++ Sbjct: 206 PAMVRDFQAIIGKETKEQMLEKEGRLPDSLVACVGGGSNAMGLFHPFLDDASVEIIGVEAGGHGVSTDKHAASLNGGVPGVLHGNRTYLLQDGDGQITDAHSISAGLDYPGIGPEHAFLHEVKRVEYVSITDDEALDAFHQCCLLEGIIPALETAHALAEAMKRATNLRDDHLMVVCLSGRGDKDMQTVMNHM 398
BLAST of CF836273 vs. ExPASy Swiss-Prot
Match: TRPB_OCHA4 (Tryptophan synthase beta chain OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=trpB PE=3 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 2.210e-63 Identity = 116/193 (60.10%), Postives = 148/193 (76.68%), Query Frame = -2 Query: 182 PMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYL 760 P +VRDF +VIG E R+Q LE+ G PDV++A VGGGSNA+GLFH F++D V+++GVEA G GLD +H A++S G GVLHG +YLLQ++DGQI+E HS+SAGLDYPGVGPEHS+LKD GR +Y + DDEAL+AF+ +R EGIIPALE+AHA+A K+ PT+ ++VN SGRGDKDV T K L Sbjct: 210 PELVRDFQSVIGNEARQQILEQEGRLPDVIVAAVGGGSNAIGLFHPFLDDASVKIVGVEAGGRGLDGEEHCASMSAGRPGVLHGNRTYLLQNDDGQILEGHSVSAGLDYPGVGPEHSWLKDSGRVDYVPILDDEALDAFQLCTRTEGIIPALESAHAIAQAVKMAPTMGKDQVMIVNLSGRGDKDVHTVGKLL 402
BLAST of CF836273 vs. ExPASy Swiss-Prot
Match: TRPB_BACWK (Tryptophan synthase beta chain OS=Bacillus weihenstephanensis (strain KBAB4) GN=trpB PE=3 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 2.210e-63 Identity = 116/194 (59.79%), Postives = 154/194 (79.38%), Query Frame = -2 Query: 179 PMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQ 760 P +VRDF +VIGKET++Q G P+ ++AC+GGGSNAMG+F+ FV+D++V L GVEAAG G+ + KHAATL+KG VGVLHG++ YLLQ+E+GQI E HSISAGLDYPGVGPEHS LKD GR Y+++TD+EALEAF+ ++ EGIIPALE++HA+AY KL P + +V+ SGRGDKDV++ +Y++ Sbjct: 202 PQIVRDFQSVIGKETKKQYEALEGKLPEAVVACIGGGSNAMGMFYPFVHDEEVALYGVEAAGKGVHTEKHAATLTKGSVGVLHGSMMYLLQNEEGQIQEAHSISAGLDYPGVGPEHSLLKDIGRVSYHSITDEEALEAFQLLTKKEGIIPALESSHAVAYALKLAPQMKKDEGLVICLSGRGDKDVESIKRYME 395
BLAST of CF836273 vs. ExPASy Swiss-Prot
Match: TRPB_BACCQ (Tryptophan synthase beta chain OS=Bacillus cereus (strain Q1) GN=trpB PE=3 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 2.886e-63 Identity = 116/194 (59.79%), Postives = 153/194 (78.87%), Query Frame = -2 Query: 179 PMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQ 760 P +VRDF +VIG ET++Q G P+ ++AC+GGGSNAMG+F+ FV+D++V L GVEAAG G+ + KHAATL+KG VGVLHG++ YLLQ+E+GQI E HSISAGLDYPGVGPEHS LKD GR Y+++TDDEALEAF+ ++ EGIIPALE++HA+AY KL P + +V+ SGRGDKDV++ +Y++ Sbjct: 202 PQIVRDFQSVIGNETKKQYEALEGKLPEAVVACIGGGSNAMGMFYPFVHDEEVALYGVEAAGKGVHTEKHAATLTKGSVGVLHGSMMYLLQNEEGQIQEAHSISAGLDYPGVGPEHSLLKDIGRVSYHSITDDEALEAFQLLTKKEGIIPALESSHAVAYALKLAPQMKKDEGLVICLSGRGDKDVESIKRYME 395
BLAST of CF836273 vs. ExPASy Swiss-Prot
Match: TRPB_BACC7 (Tryptophan synthase beta chain OS=Bacillus cereus (strain AH187) GN=trpB PE=3 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 2.886e-63 Identity = 116/194 (59.79%), Postives = 153/194 (78.87%), Query Frame = -2 Query: 179 PMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQ 760 P +VRDF +VIG ET++Q G P+ ++AC+GGGSNAMG+F+ FV+D++V L GVEAAG G+ + KHAATL+KG VGVLHG++ YLLQ+E+GQI E HSISAGLDYPGVGPEHS LKD GR Y+++TDDEALEAF+ ++ EGIIPALE++HA+AY KL P + +V+ SGRGDKDV++ +Y++ Sbjct: 202 PQIVRDFQSVIGNETKKQYEALEGKLPEAVVACIGGGSNAMGMFYPFVHDEEVALYGVEAAGKGVHTEKHAATLTKGSVGVLHGSMMYLLQNEEGQIQEAHSISAGLDYPGVGPEHSLLKDIGRVSYHSITDDEALEAFQLLTKKEGIIPALESSHAVAYALKLAPQMKKDEGLVICLSGRGDKDVESIKRYME 395
BLAST of CF836273 vs. ExPASy Swiss-Prot
Match: TRPB_BACC2 (Tryptophan synthase beta chain OS=Bacillus cereus (strain G9842) GN=trpB PE=3 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 2.886e-63 Identity = 116/194 (59.79%), Postives = 153/194 (78.87%), Query Frame = -2 Query: 179 PMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQ 760 P +VRDF +VIG ET++Q G P+ ++AC+GGGSNAMG+F+ FV+D++V L GVEAAG G+ + KHAATL+KG VGVLHG++ YLLQ+E+GQI E HSISAGLDYPGVGPEHS LKD GR Y+++TDDEALEAF+ ++ EGIIPALE++HA+AY KL P + +V+ SGRGDKDV++ +Y++ Sbjct: 202 PQIVRDFQSVIGNETKKQYEALEGKLPEAVVACIGGGSNAMGMFYPFVHDEEVALYGVEAAGKGVHTEKHAATLTKGSVGVLHGSMMYLLQNEEGQIQEAHSISAGLDYPGVGPEHSLLKDIGRVSYHSITDDEALEAFQLLTKKEGIIPALESSHAVAYALKLAPKMKKDEGLVICLSGRGDKDVESIKRYME 395
BLAST of CF836273 vs. ExPASy Swiss-Prot
Match: TRPB_METFK (Tryptophan synthase beta chain OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=trpB PE=3 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 3.770e-63 Identity = 121/189 (64.02%), Postives = 148/189 (78.31%), Query Frame = -2 Query: 197 PMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGE-VGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQT 760 PMMVRDF AVIG E ++Q E G +PD +IACVGGGSNAMG+F+ +++ + VRLIGVEAAG G+D+G+HAA L+ GVLHG +YL+QDE+GQIIE HSISAGLDYPGVGPEH++LKD RAEY VTDDEA+EAF R EGIIPALE++HALAY KL T++ ++VN SGRGDKD+ T Sbjct: 203 PMMVRDFQAVIGTEAKQQMQELIGRQPDAVIACVGGGSNAMGIFYPYIDVEGVRLIGVEAAGHGIDTGRHAAPLTANSPAGVLHGNRTYLMQDENGQIIETHSISAGLDYPGVGPEHAWLKDIKRAEYVAVTDDEAMEAFHTLCRTEGIIPALESSHALAYAMKLAETMSPDQALLVNLSGRGDKDINT 391
BLAST of CF836273 vs. ExPASy Swiss-Prot
Match: TRPB_EXIS2 (Tryptophan synthase beta chain OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=trpB PE=3 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 3.770e-63 Identity = 118/188 (62.77%), Postives = 148/188 (78.72%), Query Frame = -2 Query: 197 PMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQT 760 P +VRDF AVIG+ETR Q LEK G P+ ++ACVGGGSNA+G+FH F++D++V L G+EAAG GL++ KHAAT+SKGEVGVLHG++ YLLQDE GQ+ E HSISAGLDYPGVGPEHS LKD GR +Y VTD +AL+A + + EGIIPALE+AHA+A+ ++L + VV+ SGRGDKDV T Sbjct: 203 PEIVRDFQAVIGQETRTQILEKEGKLPEAIVACVGGGSNAIGMFHPFIDDEEVALYGIEAAGSGLETEKHAATMSKGEVGVLHGSMMYLLQDEHGQVTEAHSISAGLDYPGVGPEHSLLKDIGRVQYEAVTDQQALDALQLLCQKEGIIPALESAHAVAHAKELARGMQPEEVVVICLSGRGDKDVMT 390 The following BLAST results are available for this feature:
BLAST of CF836273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 449
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836273 ID=CF836273; Name=CF836273; organism=Citrus sinensis; type=EST; length=761bpback to top |