CF836274
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_LISW6 (Tryptophan synthase beta chain OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=trpB PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 4.243e-23 Identity = 57/102 (55.88%), Postives = 66/102 (64.71%), Query Frame = 2 Query: 227 WQRPDVXXXXXXXXXXXVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQA 532 +Q PD VPETLM A+ EL+ A D FQ+EL+ L++YVGRETPLYFAE+LT H GG IYLKREDLNHTGAHKINN +GQA Sbjct: 3 YQAPDENGFYGKFGGRFVPETLMKAVIELDEAYRASKTDSAFQKELNYYLKEYVGRETPLYFAEQLTAH-----AGGAKIYLKREDLNHTGAHKINNTIGQA 99
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_STRMU (Tryptophan synthase beta chain OS=Streptococcus mutans GN=trpB PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 7.238e-23 Identity = 53/84 (63.10%), Postives = 63/84 (75.00%), Query Frame = 2 Query: 278 VPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQ 529 +PETLM A+ EL+ A + D F EEL +L+DYVGRETPLYFA+RLT++ GG IYLKREDLNHTGAHKINNA+GQ Sbjct: 20 IPETLMTAVIELDEAYREAKADPSFHEELDALLKDYVGRETPLYFAKRLTDYI-----GGAKIYLKREDLNHTGAHKINNALGQ 98
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_PROMS (Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain AS9601) GN=trpB PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 7.238e-23 Identity = 56/85 (65.88%), Postives = 64/85 (75.29%), Query Frame = 2 Query: 278 VPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQA 532 VPETLM AL ELE A D+ F EEL+ +L+ YVGRETPLY A+RLTEHY+ P I+LKREDLNHTGAHKINNA+GQA Sbjct: 34 VPETLMPALFELEDAASNAWKDKLFVEELNHLLKTYVGRETPLYEAKRLTEHYKNKQ-ATPRIWLKREDLNHTGAHKINNALGQA 117
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_PROM0 (Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain MIT 9301) GN=trpB PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 7.238e-23 Identity = 56/85 (65.88%), Postives = 65/85 (76.47%), Query Frame = 2 Query: 278 VPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQA 532 VPETLM AL ELE+A D+ F EEL+ +L+ YVGRETPLY A+RLTEHY+ P I+LKREDLNHTGAHKINNA+GQA Sbjct: 34 VPETLMPALFELETAASNAWKDKLFVEELNHLLKTYVGRETPLYEAKRLTEHYKTKQ-ATPRIWLKREDLNHTGAHKINNALGQA 117
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_BACC7 (Tryptophan synthase beta chain OS=Bacillus cereus (strain AH187) GN=trpB PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 7.238e-23 Identity = 53/85 (62.35%), Postives = 64/85 (75.29%), Query Frame = 2 Query: 278 VPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQA 532 VPETLM ++ ELE A + +D +FQ+EL+ L+ YVGRETPLYFAE +TE+ GG IYLKREDLNHTGAHKINN +GQA Sbjct: 20 VPETLMQSVLELEEAYKEAMEDEEFQKELNHYLKTYVGRETPLYFAENMTEYC-----GGAKIYLKREDLNHTGAHKINNTIGQA 99
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_PROMA (Tryptophan synthase beta chain OS=Prochlorococcus marinus GN=trpB PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.235e-22 Identity = 57/100 (57.00%), Postives = 66/100 (66.00%), Query Frame = 2 Query: 233 RPDVXXXXXXXXXXXVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQA 532 RP VPETL+ AL+ELE A D F +EL+ +L+ YVGRETPLY A RLT+HY R GP I+LKREDLNHTGAHKINNA+GQA Sbjct: 19 RPSAHGRFGRFGGQYVPETLIPALTELEQAAATAWKDESFTKELTQLLKTYVGRETPLYEATRLTKHYER-GTVGPRIWLKREDLNHTGAHKINNALGQA 117
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_LISIN (Tryptophan synthase beta chain OS=Listeria innocua GN=trpB PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.235e-22 Identity = 56/102 (54.90%), Postives = 66/102 (64.71%), Query Frame = 2 Query: 227 WQRPDVXXXXXXXXXXXVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQA 532 +Q PD VPETLM A+ EL+ A D FQ+EL+ L++YVGRETPLYFAE+LT + GG IYLKREDLNHTGAHKINN +GQA Sbjct: 3 YQAPDENGFYGKFGGRFVPETLMKAVKELDEAYRASKTDAAFQKELNYYLKEYVGRETPLYFAEQLTAY-----AGGAKIYLKREDLNHTGAHKINNTIGQA 99
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_BACHK (Tryptophan synthase beta chain OS=Bacillus thuringiensis subsp. konkukian GN=trpB PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.106e-22 Identity = 53/85 (62.35%), Postives = 63/85 (74.12%), Query Frame = 2 Query: 278 VPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQA 532 VPETLM ++ ELE A + +D FQ+EL+ L+ YVGRETPLYFAE +TE+ GG IYLKREDLNHTGAHKINN +GQA Sbjct: 20 VPETLMQSVLELEEAYKEAMEDEAFQKELNHYLKTYVGRETPLYFAENMTEYC-----GGAKIYLKREDLNHTGAHKINNTIGQA 99
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_BACCZ (Tryptophan synthase beta chain OS=Bacillus cereus (strain ZK / E33L) GN=trpB PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.106e-22 Identity = 53/85 (62.35%), Postives = 63/85 (74.12%), Query Frame = 2 Query: 278 VPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQA 532 VPETLM ++ ELE A + +D FQ+EL+ L+ YVGRETPLYFAE +TE+ GG IYLKREDLNHTGAHKINN +GQA Sbjct: 20 VPETLMQSVLELEEAYKEAMEDEAFQKELNHYLKTYVGRETPLYFAENMTEYC-----GGAKIYLKREDLNHTGAHKINNTIGQA 99
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_BACCQ (Tryptophan synthase beta chain OS=Bacillus cereus (strain Q1) GN=trpB PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.106e-22 Identity = 52/85 (61.18%), Postives = 64/85 (75.29%), Query Frame = 2 Query: 278 VPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQA 532 VPETLM ++ ELE A + +D +FQ+EL+ L+ YVGRETPLYFAE +T++ GG IYLKREDLNHTGAHKINN +GQA Sbjct: 20 VPETLMQSVLELEEAYKEAMEDEEFQKELNHYLKTYVGRETPLYFAENMTKYC-----GGAKIYLKREDLNHTGAHKINNTIGQA 99 The following BLAST results are available for this feature:
BLAST of CF836274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836274 ID=CF836274; Name=CF836274; organism=Citrus sinensis; type=EST; length=532bpback to top |