CF836274
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_PROMP (Tryptophan synthase beta chain OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=trpB PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.365e-21 Identity = 54/85 (63.53%), Postives = 62/85 (72.94%), Query Frame = 2 Query: 278 VPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQA 532 VPETLM AL ELE A D+ F EL+ +L+ YVGRETPLY A+RLTEHY+ I+LKREDLNHTGAHKINNA+GQA Sbjct: 33 VPETLMPALFELEEAASDAWKDKQFVNELNHLLKTYVGRETPLYEAKRLTEHYQTKTSTS-RIWLKREDLNHTGAHKINNALGQA 116
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_PROM9 (Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain MIT 9312) GN=trpB PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.365e-21 Identity = 54/85 (63.53%), Postives = 65/85 (76.47%), Query Frame = 2 Query: 278 VPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQA 532 VPETLM AL ELE+A D+ F +EL+ +L+ YVGRETPLY A+RLTEHY+ + I+LKREDLNHTGAHKINNA+GQA Sbjct: 34 VPETLMPALFELETAASNAWKDKLFVKELNHLLKTYVGRETPLYEAKRLTEHYKTKH-ATTRIWLKREDLNHTGAHKINNALGQA 117
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_BACWK (Tryptophan synthase beta chain OS=Bacillus weihenstephanensis (strain KBAB4) GN=trpB PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.365e-21 Identity = 52/85 (61.18%), Postives = 62/85 (72.94%), Query Frame = 2 Query: 278 VPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQA 532 VPETLM ++ ELE A + D FQ+EL+ L+ YVGRETPLYFAE +T++ GG IYLKREDLNHTGAHKINN +GQA Sbjct: 20 VPETLMQSVLELEEAYKEAMQDEAFQKELNHYLQTYVGRETPLYFAENMTKYC-----GGAKIYLKREDLNHTGAHKINNTIGQA 99
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_BACC1 (Tryptophan synthase beta chain OS=Bacillus cereus (strain ATCC 10987) GN=trpB PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.365e-21 Identity = 51/85 (60.00%), Postives = 63/85 (74.12%), Query Frame = 2 Query: 278 VPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQA 532 VPETLM ++ ELE A + +D FQ+EL+ L+ YVGRETPLY+AE +T++ GG IYLKREDLNHTGAHKINN +GQA Sbjct: 20 VPETLMQSVLELEEAYKEAMEDEAFQKELNHYLKTYVGRETPLYYAENMTKYC-----GGAKIYLKREDLNHTGAHKINNTIGQA 99
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_PROM5 (Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain MIT 9515) GN=trpB PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.783e-21 Identity = 54/85 (63.53%), Postives = 63/85 (74.12%), Query Frame = 2 Query: 278 VPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQA 532 VPETLM AL ELE A D+ F +EL+ +L+ YVGRETPLY A+RLTEHY+ I+LKREDLNHTGAHKINNA+GQA Sbjct: 34 VPETLMPALFELEKAASDAWKDKQFVDELNHLLKTYVGRETPLYEAKRLTEHYQTKTCTS-RIWLKREDLNHTGAHKINNALGQA 117
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_OCEIH (Tryptophan synthase beta chain OS=Oceanobacillus iheyensis GN=trpB PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.783e-21 Identity = 52/85 (61.18%), Postives = 58/85 (68.24%), Query Frame = 2 Query: 278 VPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQA 532 VPE LM A+ ELE A D F EEL L +Y+GRETPLY A++LTEH GG IYLKREDLNHTGAHKINN +GQA Sbjct: 21 VPELLMPAVLELEKAYEDALKDESFNEELQTYLTEYIGRETPLYHAKKLTEH-----AGGAQIYLKREDLNHTGAHKINNTIGQA 100
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_PROM2 (Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain MIT 9215) GN=trpB PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.328e-21 Identity = 54/85 (63.53%), Postives = 65/85 (76.47%), Query Frame = 2 Query: 278 VPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQA 532 VPETLM AL ELE+A D+ F +EL+ +L+ YVGRETPLY A+RLTE+Y+ P I+LKREDLNHTGAHKINNA+GQA Sbjct: 34 VPETLMPALFELETAASNAWKDKLFVKELNHLLKTYVGRETPLYEAKRLTEYYKTKK-AIPKIWLKREDLNHTGAHKINNALGQA 117
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_LACLA (Tryptophan synthase beta chain OS=Lactococcus lactis subsp. lactis GN=trpB PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.328e-21 Identity = 53/84 (63.10%), Postives = 61/84 (72.62%), Query Frame = 2 Query: 278 VPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQ 529 VPETLM A+ +LE A D FQ EL +L+DYVGRE PLY+A+RLTE+ GG IYLKREDLNHTGAHKINNA+GQ Sbjct: 20 VPETLMTAVKQLEEAYVDSKKDPLFQAELKELLKDYVGRENPLYYAKRLTEY-----AGGAKIYLKREDLNHTGAHKINNALGQ 98
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_EXIS2 (Tryptophan synthase beta chain OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=trpB PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.328e-21 Identity = 51/102 (50.00%), Postives = 66/102 (64.71%), Query Frame = 2 Query: 227 WQRPDVXXXXXXXXXXXVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQA 532 + +PD +PETLM A+ ELE A ++ +D F+E ++ +L +YVGR+TPLY+AE LT GG IYLKREDLNHTGAHKINN +GQA Sbjct: 4 YSQPDALGQYGIYGGRYIPETLMQAVLELEQAYAEVKEDPAFRERMNDLLENYVGRQTPLYYAEHLTRTI-----GGAKIYLKREDLNHTGAHKINNTIGQA 100
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_BACCR (Tryptophan synthase beta chain OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=trpB PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.041e-21 Identity = 50/85 (58.82%), Postives = 62/85 (72.94%), Query Frame = 2 Query: 278 VPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQA 532 VPETLM ++ ELE A + D FQ+EL+ L+ Y+GRETPLY+AE +T++ GG IYLKREDLNHTGAHKINN +GQA Sbjct: 20 VPETLMQSVLELEEAYKEAMQDEAFQKELNHYLKTYIGRETPLYYAENMTKYC-----GGAKIYLKREDLNHTGAHKINNTIGQA 99 The following BLAST results are available for this feature:
BLAST of CF836274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836274 ID=CF836274; Name=CF836274; organism=Citrus sinensis; type=EST; length=532bpback to top |