CF836274
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_RHOPS (Tryptophan synthase beta chain OS=Rhodopseudomonas palustris (strain BisB5) GN=trpB PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 8.848e-21 Identity = 50/84 (59.52%), Postives = 59/84 (70.24%), Query Frame = 2 Query: 278 VPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQ 529 V ETLM + ELE A + DD F+ E+ G L+ YVGR +PLYFAERLTEH+ GG IY KREDLNHTGAHK+NN +GQ Sbjct: 27 VAETLMPLILELEKAYAEAKDDPAFRTEMDGYLKHYVGRPSPLYFAERLTEHF-----GGAKIYFKREDLNHTGAHKVNNVLGQ 105
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_PSEAE (Tryptophan synthase beta chain OS=Pseudomonas aeruginosa GN=trpB PE=3 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 8.848e-21 Identity = 54/98 (55.10%), Postives = 60/98 (61.22%), Query Frame = 2 Query: 236 PDVXXXXXXXXXXXVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQ 529 PD V ETLM + +L K DD FQEEL+ RDYVGR +PLYFAERLTEH GG IYLKRE+LNHTGAHKINN +GQ Sbjct: 8 PDAKGLFGRFGGQYVAETLMPLILDLAREYEKAKDDPAFQEELAYFQRDYVGRPSPLYFAERLTEHC-----GGAKIYLKREELNHTGAHKINNCIGQ 100
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB1_THEMA (Tryptophan synthase beta chain 1 OS=Thermotoga maritima GN=trpB1 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 8.848e-21 Identity = 51/84 (60.71%), Postives = 59/84 (70.24%), Query Frame = 2 Query: 278 VPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQ 529 VPE LM AL ELE+A ++ D F +E + +LRDY GR TPLYFA RL+E Y G IYLKREDL HTGAHKINNA+GQ Sbjct: 13 VPEILMPALEELEAAYEEIMKDESFWKEFNDLLRDYAGRPTPLYFARRLSEKY------GARIYLKREDLLHTGAHKINNAIGQ 90
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_THEP3 (Tryptophan synthase beta chain OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=trpB PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.156e-20 Identity = 51/84 (60.71%), Postives = 58/84 (69.05%), Query Frame = 2 Query: 278 VPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQ 529 VPET+M AL ELE K +D+DF EE LR+Y GR TPLY+AE LT+ GG IYLKREDLNHTGAHKINN +GQ Sbjct: 13 VPETVMNALIELEREFEKAKEDKDFMEEYRYYLREYSGRPTPLYYAENLTKRL-----GGAKIYLKREDLNHTGAHKINNVLGQ 91
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_PHEZH (Tryptophan synthase beta chain OS=Phenylobacterium zucineum (strain HLK1) GN=trpB PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.156e-20 Identity = 53/98 (54.08%), Postives = 61/98 (62.24%), Query Frame = 2 Query: 236 PDVXXXXXXXXXXXVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQ 529 PD+ VPETLM + EL +A D FQ EL+G L YVGR +PLYFAERLT HY GG IYLKRE+LNHTG+HKINN +GQ Sbjct: 14 PDLKGRFGDYGGQYVPETLMPLVHELTAAYEAAKADPAFQAELAGYLTHYVGRPSPLYFAERLTRHY-----GGAKIYLKREELNHTGSHKINNCMGQ 106
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_CAMJD (Tryptophan synthase beta chain OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=trpB PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.156e-20 Identity = 49/85 (57.65%), Postives = 64/85 (75.29%), Query Frame = 2 Query: 278 VPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQA 532 +PE+ M+AL+ELE+A K + D+ F++ELS +L+ YVGR TPLYFA L++ Y+ IYLKREDLNHTGAHKINNA+ QA Sbjct: 14 LPESAMFALNELENAFLKFSKDKFFKKELSELLKTYVGRPTPLYFARNLSKKYQH------EIYLKREDLNHTGAHKINNAIAQA 92
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_THEPX (Tryptophan synthase beta chain OS=Thermoanaerobacter sp. (strain X514) GN=trpB PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.574e-20 Identity = 51/84 (60.71%), Postives = 57/84 (67.86%), Query Frame = 2 Query: 278 VPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQ 529 VPET+M AL ELE K D+DF EE LR+Y GR TPLY+AE LT+ GG IYLKREDLNHTGAHKINN +GQ Sbjct: 13 VPETVMNALIELEREFEKAKQDKDFMEEYRYYLREYSGRPTPLYYAENLTKKL-----GGAKIYLKREDLNHTGAHKINNVLGQ 91
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_OLICO (Tryptophan synthase beta chain OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=trpB PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.574e-20 Identity = 49/84 (58.33%), Postives = 60/84 (71.43%), Query Frame = 2 Query: 278 VPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQ 529 V ETLM + +LE A D FQ+E++G L+DYVGR +PLYFAERLTEH GG IYLKRE+LNHTG+HK+NN +GQ Sbjct: 27 VAETLMPLILDLEKAYAAAKADPSFQKEMNGYLKDYVGRPSPLYFAERLTEHL-----GGAKIYLKREELNHTGSHKVNNVLGQ 105
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_RHOP2 (Tryptophan synthase beta chain OS=Rhodopseudomonas palustris (strain HaA2) GN=trpB PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 4.391e-20 Identity = 49/84 (58.33%), Postives = 58/84 (69.05%), Query Frame = 2 Query: 278 VPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQ 529 V ETLM + LE A + DD F+ E+ G L+ YVGR +PLYFAERLTEH+ GG IY KREDLNHTGAHK+NN +GQ Sbjct: 27 VAETLMPLILALEKAYAEAKDDPAFRAEMDGYLKHYVGRPSPLYFAERLTEHF-----GGAKIYFKREDLNHTGAHKVNNVLGQ 105
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_CLOAB (Tryptophan synthase beta chain OS=Clostridium acetobutylicum GN=trpB PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 4.391e-20 Identity = 50/84 (59.52%), Postives = 59/84 (70.24%), Query Frame = 2 Query: 278 VPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQ 529 VPETLM A++ELE +K +D F E L YVGRETPLYFAE +T+ N GG IYLKREDLNHTG+HK+NNA+GQ Sbjct: 13 VPETLMNAINELEVEFNKAINDEKFMMEYKYYLEKYVGRETPLYFAENMTK-----NLGGAKIYLKREDLNHTGSHKLNNALGQ 91 The following BLAST results are available for this feature:
BLAST of CF836274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836274 ID=CF836274; Name=CF836274; organism=Citrus sinensis; type=EST; length=532bpback to top |