CF836274
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_CAMJR (Tryptophan synthase beta chain OS=Campylobacter jejuni (strain RM1221) GN=trpB PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 4.391e-20 Identity = 48/85 (56.47%), Postives = 63/85 (74.12%), Query Frame = 2 Query: 278 VPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQA 532 +PE+ M+AL+ELE A K + D+ F++EL+ +L+ YVGR TPLYFA L++ Y+ IYLKREDLNHTGAHKINNA+ QA Sbjct: 14 LPESAMFALNELEGAFLKFSKDKLFKKELNELLKTYVGRPTPLYFARNLSKKYQH------EIYLKREDLNHTGAHKINNAIAQA 92
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_CAMJJ (Tryptophan synthase beta chain OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=trpB PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 4.391e-20 Identity = 48/85 (56.47%), Postives = 63/85 (74.12%), Query Frame = 2 Query: 278 VPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQA 532 +PE+ M+AL+ELE A K + D+ F++EL+ +L+ YVGR TPLYFA L++ Y+ IYLKREDLNHTGAHKINNA+ QA Sbjct: 14 LPESAMFALNELEGAFLKFSKDKLFKKELNELLKTYVGRPTPLYFARNLSKKYQH------EIYLKREDLNHTGAHKINNAIAQA 92
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_CAMJE (Tryptophan synthase beta chain OS=Campylobacter jejuni GN=trpB PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 4.391e-20 Identity = 48/85 (56.47%), Postives = 63/85 (74.12%), Query Frame = 2 Query: 278 VPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQA 532 +PE+ M+AL+ELE A K + D+ F++EL+ +L+ YVGR TPLYFA L++ Y+ IYLKREDLNHTGAHKINNA+ QA Sbjct: 14 LPESAMFALNELEGAFLKFSKDKLFKKELNELLKTYVGRPTPLYFARNLSKKYQH------EIYLKREDLNHTGAHKINNAIAQA 92
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_CAMJ8 (Tryptophan synthase beta chain OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=trpB PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 4.391e-20 Identity = 48/85 (56.47%), Postives = 63/85 (74.12%), Query Frame = 2 Query: 278 VPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQA 532 +PE+ M+AL+ELE A K + D+ F++EL+ +L+ YVGR TPLYFA L++ Y+ IYLKREDLNHTGAHKINNA+ QA Sbjct: 14 LPESAMFALNELEGAFLKFSKDKLFKKELNELLKTYVGRPTPLYFARNLSKKYQH------EIYLKREDLNHTGAHKINNAIAQA 92
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_CLOB8 (Tryptophan synthase beta chain OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=trpB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 5.735e-20 Identity = 49/84 (58.33%), Postives = 60/84 (71.43%), Query Frame = 2 Query: 278 VPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQ 529 VPET+M AL ELE A +K+ DD++F +E L Y GR +PLY+AE +T+ GG IYLKREDLNHTGAHKINNA+GQ Sbjct: 13 VPETVMNALIELEDAYNKVIDDKEFMDEYMYYLNYYTGRPSPLYYAENMTKDL-----GGAKIYLKREDLNHTGAHKINNALGQ 91
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB2_WOLSU (Tryptophan synthase beta chain 2 OS=Wolinella succinogenes GN=trpB2 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 9.783e-20 Identity = 56/105 (53.33%), Postives = 66/105 (62.86%), Query Frame = 2 Query: 218 PAPWQ-RPDVXXXXXXXXXXXVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQ 529 P P Q PD VPETLM AL ELESA ++L DR+F E+ L++YVGR +PLY+AERL++ G IYLKREDLNHTGAHKINN V Q Sbjct: 6 PTPSQFDPDERGHFGKFGGRFVPETLMPALLELESAYNELRFDREFWSEVDYYLKEYVGRPSPLYYAERLSDEL------GAKIYLKREDLNHTGAHKINNTVIQ 104
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_BACSU (Tryptophan synthase beta chain OS=Bacillus subtilis GN=trpB PE=3 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 1.278e-19 Identity = 48/85 (56.47%), Postives = 62/85 (72.94%), Query Frame = 2 Query: 278 VPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQA 532 VPETLM L E+++A ++ DD F+EE +L+DY GR T L +A+R+TE+ GG IYLKREDLNHTG+HKINNA+GQA Sbjct: 19 VPETLMQPLDEIQTAFKQIKDDPAFREEYYKLLKDYSGRPTALTYADRVTEYL-----GGAKIYLKREDLNHTGSHKINNALGQA 98
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_BACLD (Tryptophan synthase beta chain OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=trpB PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.278e-19 Identity = 50/85 (58.82%), Postives = 59/85 (69.41%), Query Frame = 2 Query: 278 VPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQA 532 VPETLM L E+E A +L DD FQ++ +L DY GR T L FA++LT+ GG IYLKREDLNHTGAHKINNA+GQA Sbjct: 19 VPETLMQPLEEIEKAFLELKDDPSFQKDYQKLLNDYSGRPTALTFADQLTKQL-----GGAKIYLKREDLNHTGAHKINNALGQA 98
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_STAS1 (Tryptophan synthase beta chain OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=trpB PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.669e-19 Identity = 51/85 (60.00%), Postives = 59/85 (69.41%), Query Frame = 2 Query: 278 VPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQA 532 VPETLM A+ EL+ A +D FQ EL L+DYVGRETPL +A+ +E GG IYLKREDLNHTGAHKINNA+GQA Sbjct: 23 VPETLMPAIQELKQAYQDAKNDPQFQIELDDYLKDYVGRETPLTYAKSYSELL-----GGAKIYLKREDLNHTGAHKINNALGQA 102
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_ACIBL (Tryptophan synthase beta chain OS=Acidobacteria bacterium (strain Ellin345) GN=trpB PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.179e-19 Identity = 48/84 (57.14%), Postives = 58/84 (69.05%), Query Frame = 2 Query: 278 VPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQ 529 VPETLM AL ELE+A D+ F+EE+ +LR+Y GR TPL+ A+ LT+ GG IYLKREDL HTGAHKINN +GQ Sbjct: 32 VPETLMAALQELEAAYEAAKRDKKFKEEIESLLREYAGRPTPLFLAKNLTQKL-----GGAKIYLKREDLLHTGAHKINNCIGQ 110 The following BLAST results are available for this feature:
BLAST of CF836274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836274 ID=CF836274; Name=CF836274; organism=Citrus sinensis; type=EST; length=532bpback to top |