CF836274
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_PSEF5 (Tryptophan synthase beta chain OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=trpB PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 2.846e-19 Identity = 49/84 (58.33%), Postives = 58/84 (69.05%), Query Frame = 2 Query: 278 VPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQ 529 V ETLM + +L K +D +F +EL+ RDYVGR +PLYFAERLTEH GG IYLKRE+LNHTGAHKINN +GQ Sbjct: 24 VAETLMPLILDLAREYEKAKEDPEFLKELAYFQRDYVGRPSPLYFAERLTEHC-----GGAKIYLKREELNHTGAHKINNCIGQ 102
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_LEPBP (Tryptophan synthase beta chain OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=trpB PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 2.846e-19 Identity = 49/84 (58.33%), Postives = 60/84 (71.43%), Query Frame = 2 Query: 281 PETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQA 532 PE L AL ELES KL + F++EL L++YVGR +PL +AERLT+ + GG I+LKREDLNHTGAHKINNA+GQA Sbjct: 18 PEILTEALEELESTYQKLKKSKKFKKELEFYLQNYVGRPSPLTYAERLTKQW-----GGARIWLKREDLNHTGAHKINNAIGQA 96
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_LEPBA (Tryptophan synthase beta chain OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=trpB PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 2.846e-19 Identity = 49/84 (58.33%), Postives = 60/84 (71.43%), Query Frame = 2 Query: 281 PETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQA 532 PE L AL ELES KL + F++EL L++YVGR +PL +AERLT+ + GG I+LKREDLNHTGAHKINNA+GQA Sbjct: 18 PEILTEALEELESTYQKLKKSKKFKKELEFYLQNYVGRPSPLTYAERLTKQW-----GGARIWLKREDLNHTGAHKINNAIGQA 96
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_CLOK5 (Tryptophan synthase beta chain OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=trpB PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 2.846e-19 Identity = 49/84 (58.33%), Postives = 59/84 (70.24%), Query Frame = 2 Query: 278 VPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQ 529 VPET+M AL ELE + +K +D F +E L++Y GR TPLY+AE LT+ N GG IYLKREDLNHTGAHKINN +GQ Sbjct: 19 VPETVMTALMELEESFNKAKEDSKFIDEYMYYLQEYSGRPTPLYYAENLTK-----NLGGAKIYLKREDLNHTGAHKINNVLGQ 97
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_CLOK1 (Tryptophan synthase beta chain OS=Clostridium kluyveri (strain NBRC 12016) GN=trpB PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 2.846e-19 Identity = 49/84 (58.33%), Postives = 59/84 (70.24%), Query Frame = 2 Query: 278 VPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQ 529 VPET+M AL ELE + +K +D F +E L++Y GR TPLY+AE LT+ N GG IYLKREDLNHTGAHKINN +GQ Sbjct: 19 VPETVMTALMELEESFNKAKEDSKFIDEYMYYLQEYSGRPTPLYYAENLTK-----NLGGAKIYLKREDLNHTGAHKINNVLGQ 97
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_BRAJA (Tryptophan synthase beta chain OS=Bradyrhizobium japonicum GN=trpB PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 2.846e-19 Identity = 48/84 (57.14%), Postives = 59/84 (70.24%), Query Frame = 2 Query: 278 VPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQ 529 V ETLM + +LE A D FQ E++G L++YVGR +PLYFAERLTEH GG IYLKRE+LNHTG+HK+NN +GQ Sbjct: 27 VAETLMPLILDLEKAYTAAKADPAFQAEMNGYLKNYVGRPSPLYFAERLTEHL-----GGAKIYLKREELNHTGSHKVNNVLGQ 105
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_RHOPB (Tryptophan synthase beta chain OS=Rhodopseudomonas palustris (strain BisB18) GN=trpB PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 3.717e-19 Identity = 47/84 (55.95%), Postives = 57/84 (67.86%), Query Frame = 2 Query: 278 VPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQ 529 V ETLM + +LE A D FQ E+ G L+DYVGR +PLYFAERLT+H GG IY KRE+LNHTG+HK+NN +GQ Sbjct: 27 VAETLMPLILDLEKAYAGAKADPSFQREMDGYLKDYVGRPSPLYFAERLTDHL-----GGAKIYFKREELNHTGSHKVNNVLGQ 105
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_RHOBA (Tryptophan synthase beta chain OS=Rhodopirellula baltica GN=trpB PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 3.717e-19 Identity = 53/113 (46.90%), Postives = 62/113 (54.87%), Query Frame = 2 Query: 194 MEAKKESDPAPWQRPDVXXXXXXXXXXXVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQA 532 M A Q PD VPETL AL EL K D +FQ EL G+L+ +VGR +PLY A+RL+ GG I+LKREDLNHTGAHKINN +GQA Sbjct: 1 MSTAPSQQHASAQVPDPRGRFGDFGGRFVPETLTRALDELSEEYEKAKRDPEFQRELDGLLKTFVGRPSPLYHAKRLSSAV-----GGAQIWLKREDLNHTGAHKINNTIGQA 108
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_METJA (Tryptophan synthase beta chain OS=Methanocaldococcus jannaschii GN=trpB PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 4.855e-19 Identity = 50/87 (57.47%), Postives = 63/87 (72.41%), Query Frame = 2 Query: 278 VPETLMYALSELESALHK--LADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQA 532 VPETLM A++ELE A + + ++ +F+EE +LRDYVGR TPLY+AERL+E G +YLKREDL H GAHKINNA+GQA Sbjct: 26 VPETLMPAIAELEEAFKRFWINNEGNFREEFYALLRDYVGRPTPLYYAERLSEEL------GCKVYLKREDLAHLGAHKINNALGQA 106
BLAST of CF836274 vs. ExPASy Swiss-Prot
Match: TRPB_META3 (Tryptophan synthase beta chain OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=trpB PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 4.855e-19 Identity = 51/85 (60.00%), Postives = 58/85 (68.24%), Query Frame = 2 Query: 278 VPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQA 532 VPE LM +L ELE A K DD +F+EEL L+ Y GRETPLYFAE LT+ GG IYLKREDL GAHKINN++GQA Sbjct: 13 VPEVLMPSLKELEKAYKKYKDDPEFKEELEYYLKQYAGRETPLYFAENLTKKM-----GGAKIYLKREDLLLGGAHKINNSLGQA 92 The following BLAST results are available for this feature:
BLAST of CF836274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836274 ID=CF836274; Name=CF836274; organism=Citrus sinensis; type=EST; length=532bpback to top |