CF836275

Overview
NameCF836275
Unique NameCF836275
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length675
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836275 vs. ExPASy Swiss-Prot
Match: CAMT_CITNA (Caffeoyl-CoA O-methyltransferase OS=Citrus natsudaidai PE=3 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 6.345e-69
Identity = 119/144 (82.64%), Postives = 136/144 (94.44%), Query Frame = -1
Query:  244 DDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLVELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRI 675
            DDGKILAMDINRENYE+GLP I+KAGVAH+I FREGPALPVLD L++D+KNHG++DFIFVDADKDNY+NYHKR+++LVKVGG+IGYDNTLWNGSVV PPDAP+RKY+RY RDFVLEL KALA DPRIEICMLPVGDG+T+ RRI
Sbjct:   88 DDGKILAMDINRENYEIGLPKIEKAGVAHRIQFREGPALPVLDQLVEDKKNHGTYDFIFVDADKDNYINYHKRIIDLVKVGGLIGYDNTLWNGSVVGPPDAPMRKYLRYCRDFVLELIKALAVDPRIEICMLPVGDGITLSRRI 231          
BLAST of CF836275 vs. ExPASy Swiss-Prot
Match: CAMT_PINTA (Caffeoyl-CoA O-methyltransferase OS=Pinus taeda GN=CCOAOMT PE=2 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 8.287e-69
Identity = 120/144 (83.33%), Postives = 135/144 (93.75%), Query Frame = -1
Query:  244 DDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLVELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRI 675
            DDGKILAMDINRENY++GLP+I+KAGVAHKIDFREGPALPVLD L+++E  HGSFDF+FVD DKDNYLNYHKRL++LVKVGG+I YDNTLWNGSVVAPPDAPLRKYVRYYRDFV+ELNKALA DPRIEI  +PV DGVT+CRR+
Sbjct:  115 DDGKILAMDINRENYDIGLPIIEKAGVAHKIDFREGPALPVLDELLKNEDMHGSFDFVFVDRDKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRDFVMELNKALAVDPRIEISQIPVLDGVTLCRRV 258          
BLAST of CF836275 vs. ExPASy Swiss-Prot
Match: CAMT2_MAIZE (Caffeoyl-CoA O-methyltransferase 2 OS=Zea mays GN=CCOAOMT2 PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.463e-65
Identity = 115/145 (79.31%), Postives = 130/145 (89.66%), Query Frame = -1
Query:  241 DDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLVELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRIK 675
            +DG ILAMDINRENYELGLP I KAGV HKIDFREGPALPVLD L+ D++ HGSFDF FVDADKDNYLNYH+RL++LV+ GG+IGYDNTLWNGSVV P DAP+RKY+R+YRDFVL LN ALAAD R+EIC LPVGDGVT+CRR+K
Sbjct:  120 EDGTILAMDINRENYELGLPCINKAGVGHKIDFREGPALPVLDDLVADKEQHGSFDFAFVDADKDNYLNYHERLLKLVRPGGLIGYDNTLWNGSVVLPDDAPMRKYIRFYRDFVLALNSALAADDRVEICQLPVGDGVTLCRRVK 264          
BLAST of CF836275 vs. ExPASy Swiss-Prot
Match: CAMT3_ARATH (Probable caffeoyl-CoA O-methyltransferase At4g26220 OS=Arabidopsis thaliana GN=At4g26220 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.171e-44
Identity = 84/144 (58.33%), Postives = 111/144 (77.08%), Query Frame = -1
Query:  244 DDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLVELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRI 675
            +DGK++A+D+NR++YE+GLPVI+KAGV HKIDF+E  ALP LD L+ ++ N G FDF FVDADK NY NYH+RL+ L+KVGG+I YDNTLW GS VA PD+   ++    +   LELNK L+AD R++I    +GDG+TICRR+
Sbjct:   89 EDGKVIAIDMNRDSYEIGLPVIKKAGVEHKIDFKESEALPALDELLNNKVNEGGFDFAFVDADKLNYWNYHERLIRLIKVGGIIVYDNTLWGGS-VAEPDSSTPEWRIEVKKATLELNKKLSADQRVQISQAALGDGITICRRL 231          
BLAST of CF836275 vs. ExPASy Swiss-Prot
Match: CAMT_STELP (Caffeoyl-CoA O-methyltransferase OS=Stellaria longipes PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.167e-38
Identity = 79/144 (54.86%), Postives = 106/144 (73.61%), Query Frame = -1
Query:  244 DDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLVELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRI 675
            DDGKI A+DI+RE Y +GL +I+KAGV  KI F    A+ +LD L+ D +  GS+DF FVDADK NY+NYH+RL+ELVKVGG+I YDNTLW G+ VA P++ +  +++     V +LN+ L +D RI+I  LPVGDG+T CRR+
Sbjct:   98 DDGKITAVDIDREAYNVGLALIKKAGVESKISFIVSDAMTLLDDLLADGRYQGSYDFAFVDADKTNYVNYHERLIELVKVGGIIAYDNTLWGGT-VALPESEVPDFMKNNWVCVTKLNEILGSDARIDIAHLPVGDGITFCRRV 240          
BLAST of CF836275 vs. ExPASy Swiss-Prot
Match: CAMT1_ARATH (Putative caffeoyl-CoA O-methyltransferase At1g67980 OS=Arabidopsis thaliana GN=At1g67980 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.422e-36
Identity = 72/144 (50.00%), Postives = 103/144 (71.53%), Query Frame = -1
Query:  244 DDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLVELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRI 675
            +DG+I A+DI++E YE+GL  I+KAGV HKI+F     L  LD L+ D+     FDF F DADK +Y+N+H+RL++LVKVGG+I +DNTLW G V    D  + +++R YR  ++E NK LA DPR+E+  + +GDG+T+CRR+
Sbjct:   92 EDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIHSDGLKALDQLVNDKCE---FDFAFADADKSSYVNFHERLLKLVKVGGIIAFDNTLWFGFVAEDEDG-VPEHMREYRAALIEFNKKLALDPRVEVSQISIGDGITLCRRL 231          
BLAST of CF836275 vs. ExPASy Swiss-Prot
Match: CAMT_POPKI (Caffeoyl-CoA O-methyltransferase OS=Populus kitakamiensis PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.975e-34
Identity = 69/144 (47.92%), Postives = 103/144 (71.53%), Query Frame = -1
Query:  244 DDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLVELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRI 675
            +DG++ A+D +R  YE+GLP IQKAGV  KI+F +  A P+L+ ++ ++K    FDF FVDADK +Y +YH++L++LVK+GG+I YDNTLW G V    D  + + +R  R  ++E NK L++D R+EI  + +GDGVT+CRR+
Sbjct:   92 EDGQVTAIDKDRGAYEIGLPFIQKAGVEDKINFIQSEAPPILNEMLCNDKQP-EFDFAFVDADKSSYKHYHEQLLKLVKIGGIIAYDNTLWYGLVAKEVDDEVPEPLRMVRTVIMEFNKLLSSDLRVEISQISIGDGVTLCRRL 234          
BLAST of CF836275 vs. ExPASy Swiss-Prot
Match: CAMT2_ARATH (Probable caffeoyl-CoA O-methyltransferase At1g67990 OS=Arabidopsis thaliana GN=At1g67990 PE=2 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 2.518e-33
Identity = 69/144 (47.92%), Postives = 104/144 (72.22%), Query Frame = -1
Query:  244 DDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLVELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRI 675
            +DG+I A+DI++  Y LGL  ++KAGV HKI+F +  A+  LD L+  EK    +DF FVDADK NY+ + ++L++LVKVGG+I +DNTLW G+++   +  +  ++R YR+ +LE NK LA DPR+EI  + +GDG+T+CRR+
Sbjct:   92 EDGRITAIDIDQAGYNLGLEFMKKAGVDHKINFIQSDAVRGLDQLLNGEKQE--YDFAFVDADKTNYVYFLEKLLKLVKVGGIIAFDNTLWFGTLI-QKENEVPGHMRAYREALLEFNKILARDPRVEIAQISIGDGLTLCRRL 232          
BLAST of CF836275 vs. ExPASy Swiss-Prot
Match: CMTD1_HUMAN (Catechol-O-methyltransferase domain-containing protein 1 OS=Homo sapiens GN=COMTD1 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.703e-19
Identity = 51/143 (35.66%), Postives = 84/143 (58.74%), Query Frame = -1
Query:  244 DGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLVELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRI 672
            DG+++  +++ +  ELG P+ ++A   HKID R  PAL  LD L+   +  G+FD   VDADK+N   Y++R ++L++ GG++     LW G V+ PP   +        + V  LN+ +  D R+ I +LP+GDG+T+  +I
Sbjct:  127 DGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEA-GTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLRVLWRGKVLQPPKGDVA------AECVRNLNERIRRDVRVYISLLPLGDGLTLAFKI 262          
BLAST of CF836275 vs. ExPASy Swiss-Prot
Match: CAMT2_DICDI (Probable caffeoyl-CoA O-methyltransferase 2 OS=Dictyostelium discoideum GN=omt6 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.989e-18
Identity = 52/144 (36.11%), Postives = 84/144 (58.33%), Query Frame = -1
Query:  244 DDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLVELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRI 675
            D+G+++A D++ E  +  L    KAGV HKI+ +  PA   L  LI D+    ++DF+F+DADK  Y  Y++  ++L++ GG+I  DN L +G  VA P+A +   +   R     LN  + AD R+   +LP+ DG+T+  +I
Sbjct:   93 DEGRVVACDVSTEYTQHALKFWAKAGVDHKINLKIQPASKTLQELI-DQGEENTYDFVFIDADKTGYDTYYELSLKLIRKGGIIAIDNVLQHGR-VADPNANVEPNLVAIR----ALNDKILADKRVTKSLLPIADGITLITKI 230          
The following BLAST results are available for this feature:
BLAST of CF836275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
CAMT_CITNA6.345e-6982.64Caffeoyl-CoA O-methyltransferase OS=Citrus natsuda... [more]
CAMT_PINTA8.287e-6983.33Caffeoyl-CoA O-methyltransferase OS=Pinus taeda GN... [more]
CAMT2_MAIZE1.463e-6579.31Caffeoyl-CoA O-methyltransferase 2 OS=Zea mays GN=... [more]
CAMT3_ARATH3.171e-4458.33Probable caffeoyl-CoA O-methyltransferase At4g2622... [more]
CAMT_STELP1.167e-3854.86Caffeoyl-CoA O-methyltransferase OS=Stellaria long... [more]
CAMT1_ARATH5.422e-3650.00Putative caffeoyl-CoA O-methyltransferase At1g6798... [more]
CAMT_POPKI2.975e-3447.92Caffeoyl-CoA O-methyltransferase OS=Populus kitaka... [more]
CAMT2_ARATH2.518e-3347.92Probable caffeoyl-CoA O-methyltransferase At1g6799... [more]
CMTD1_HUMAN2.703e-1935.66Catechol-O-methyltransferase domain-containing pro... [more]
CAMT2_DICDI2.989e-1836.11Probable caffeoyl-CoA O-methyltransferase 2 OS=Dic... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS03_02L08_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02L08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836275 ID=CF836275; Name=CF836275; organism=Citrus sinensis; type=EST; length=675bp
TTTTTTTTTTTTTTTTTAAATCTACCAAACATTTAATTGATTTTCTTCAC
AACTGATTATTTTTAAACTAGCCTTAGCCAATAGTCCATTTTGCATCGAT
AAAATAAAGTACAATAATTTGCATTAAAAAGAAAAAAGCACGAGAGAGGG
GAAAAAAATGGTAAAATCACATGTAGCATTATCTTCGAGGTACCGGTCAT
CTGCGGCGGACCCCCTCAGAGAATTGGTTTAGGCATTTCACTTGATCCGA
CGGCAGATAGTGACTCCATCGCCAACGGGGAGCATGCAGATTTCAATCCT
GGGGTCAGCAGCAAGGGCCTTGTTGAGCTCCAAGACGAAGTCTCGGTAAT
ACCTAACGTACTTCCTAAGGGGAGCATCAGGTGGCGCCACGACGGATCCG
TTCCATAGGGTGTTGTCGTACCCGATCACCCCTCCAACCTTCACCAACTC
AACCAACCTCTTGTGGTAGTTTAGGTAGTTGTCCTTATCAGCGTCCACAA
ATATGAAGTCAAAGGACCCATGGTTCTTCTCATCTTGGATCAGTAGGTCA
AGAACAGGCAGGGCAGGGCCTTCTCTGAAGTCAATCTTGTGAGCAACACC
AGCTTTTTGGATAACTGGCAGCCCCAATTCATAATTTTCTCTGTTGATGT
CCATGGCCAAAATCTTTCCGTCATC
back to top