CF836278

Overview
NameCF836278
Unique NameCF836278
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length715
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8966 contig Csv1_Contig8966:228..942. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: SCP4_ARATH (Serine carboxypeptidase-like 4 OS=Arabidopsis thaliana GN=SCPL4 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.800e-32
Identity = 64/150 (42.67%), Postives = 93/150 (62.00%), Query Frame = -1
Query:  158 CRHQNYLYAPTWANDKSVQRALGIQEGMVKEWRRCNKSLSYTTNVLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFAMYPL 607
            C    ++    WAND++V++AL I +  + EW RC + + Y  ++ SS+ YH N    GY+ LIYSGD D+++P++GT+ WI+SLN +I   W+PW++  Q+AG+   Y  K    +TFATV G GHTA E+ PKE   M  RW    PL
Sbjct:  297 CYSYRFMLTTYWANDETVRKALQINKESIGEWTRCYRGIPYNHDIKSSVPYHMNNSIDGYRSLIYSGDHDIQVPFLGTQAWIRSLNYSIIDDWRPWMIKDQIAGYTTSYVNK----MTFATVTGGGHTA-EFTPKETFMMFQRWINGQPL 441          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: SCP10_ARATH (Serine carboxypeptidase-like 10 OS=Arabidopsis thaliana GN=SCPL10 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.350e-32
Identity = 65/150 (43.33%), Postives = 94/150 (62.67%), Query Frame = -1
Query:  158 CRHQNYLYAPTWANDKSVQRALGIQEGMVKEWRRCNKSLSYTTNVLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFAMYPL 607
            C +  Y     WAN++ V+ AL + +G   +W+RCN ++ Y  N++SS+ YH +    GY+ LIYSGD D+ +P+  T+ WIKSLN +I   W+PW+++ Q+AG+   Y+ K    +TFATVKG GHTA EY P E   M  RW +  PL
Sbjct:  293 CYYYLYFLIECWANNERVREALHVTKGTKGQWQRCNWTIPYDNNIISSVPYHMDNSINGYRSLIYSGDHDITMPFQATQAWIKSLNYSIVDDWRPWMINDQIAGYTRTYSNK----MTFATVKGGGHTA-EYLPNESSIMFQRWISGQPL 437          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: SCP9_ARATH (Serine carboxypeptidase-like 9 OS=Arabidopsis thaliana GN=SCPL9 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.839e-32
Identity = 65/150 (43.33%), Postives = 95/150 (63.33%), Query Frame = -1
Query:  158 CRHQNYLYAPTWANDKSVQRALGIQEGMVKEWRRCNKSLSYTTNVLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFAMYPL 607
            C +  Y     WAN++SV+ AL + +G + EW R ++ + Y +++ SS+ YH N    GY+ LI+SGD D+ +P+  T+ WIKSLN +I   W+PW++ GQ+AG+   Y+ K    +TFATVKG GHTA EY P+E   M  RW +  PL
Sbjct:  293 CYYYPYHLVECWANNESVREALHVDKGSIGEWIRDHRGIPYKSDIRSSIPYHMNNSINGYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNK----MTFATVKGGGHTA-EYLPEESSIMFQRWISGQPL 437          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: SCP5_ARATH (Serine carboxypeptidase-like 5 OS=Arabidopsis thaliana GN=SCPL5 PE=2 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 8.932e-32
Identity = 65/150 (43.33%), Postives = 91/150 (60.67%), Query Frame = -1
Query:  158 CRHQNYLYAPTWANDKSVQRALGIQEGMVKEWRRCNKSLSYTTNVLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFAMYPL 607
            C    YL    W ND +V++AL I +  + EW RC   + YT ++ SS+ YH N    GY+ LIYSGD D+ +P++ T+ W++SLN +I   W+PW++  Q+ G+   YA K    +TFATV+G GHTA EYKP E   M +RW    PL
Sbjct:  294 CYIYRYLLTTYWVNDVNVRKALQINKESIGEWVRCYFGIPYTHDIKSSVPYHMNNSINGYRSLIYSGDHDLNVPFLATQAWVRSLNYSIIDNWRPWMIKDQIGGYTKTYANK----MTFATVRGGGHTA-EYKPYETYIMFHRWINGQPL 438          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: SCP14_ARATH (Serine carboxypeptidase-like 14 OS=Arabidopsis thaliana GN=SCPL14 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.167e-31
Identity = 68/150 (45.33%), Postives = 94/150 (62.67%), Query Frame = -1
Query:  158 CRHQNYLYAPTWANDKSVQRALGIQEGMVKEWRRCNKSLSYTTNVLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFAMYPL 607
            C    YL +  WAN++ V+RAL + EG   +W RC+ S+    ++ SS+ YH N   KGY+ L+ SGD DM IP++GT+ WI+SLN +I   W+PW++  QVAG+   YA K    +T ATVKG GHT  EYKP+E   +  RW +  PL
Sbjct:  291 CYTYRYLLSIYWANNEIVRRALKVVEGSKGKWERCDLSVRSNQDIKSSIPYHMNNSIKGYRSLVISGDHDMTIPFLGTQAWIRSLNYSITEKWRPWMILDQVAGYTKTYANK----MTLATVKGGGHTL-EYKPEENSILFKRWISGQPL 435          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: SCP16_ARATH (Serine carboxypeptidase-like 16 OS=Arabidopsis thaliana GN=SCPL16 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.200e-30
Identity = 65/146 (44.52%), Postives = 90/146 (61.64%), Query Frame = -1
Query:  170 CRHQNYLYAPTWANDKSVQRALGIQEGMVKEWRRCNKSLSYTTNVLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFA 607
            C     + +  WAN++SV+RAL + EG    W RC  +L    ++ SS+ YH+    +GY+ LI+SGD DM  PYVGT+ WI+SLN +I   W+PW++  QVAG+   YA K    +TFATVKG GHT  +YKP E   +  RW +
Sbjct:  291 CHSYRSMLSDYWANNESVRRALKVVEGTTGRWERCKWTLQNNKDIKSSIPYHKKNSIQGYRSLIFSGDHDMLTPYVGTQDWIRSLNYSIIDKWRPWMILDQVAGYTTTYANK----MTFATVKGGGHTL-DYKPDENSILFKRWIS 431          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: SCP19_ARATH (Serine carboxypeptidase-like 19 OS=Arabidopsis thaliana GN=SCPL19 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.360e-30
Identity = 66/152 (43.42%), Postives = 96/152 (63.16%), Query Frame = -1
Query:  158 CRHQNYLYAPTWANDKSVQRALGIQEGMVKEWRRCN-KSLSYTTNVLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLV-DGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFAMYPL 607
            C    Y  +  WAND++V+RALG+++  V +W RCN +++ YT  + +++ YH N   KG++ LIYSGD D  +P+  T+ WI++LN +I   W+PW++   QVAG+   YA K    +TFAT+KG GHTA EY P +C  M  RW    PL
Sbjct:  320 CFTYRYFLSAFWANDENVRRALGVKK-EVGKWNRCNSQNIPYTFEIFNAVPYHVNNSLKGFRSLIYSGDHDSMVPFSSTQAWIRALNYSIVDDWRPWMMSSNQVAGYTRTYANK----MTFATIKGGGHTA-EYTPDQCSLMFRRWIDGEPL 465          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: SCP21_ARATH (Serine carboxypeptidase-like 21 OS=Arabidopsis thaliana GN=SCPL21 PE=2 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.092e-29
Identity = 60/139 (43.17%), Postives = 87/139 (62.59%), Query Frame = -1
Query:  170 APTWANDKSVQRALGI-QEGMVKEWRRCNKSLSYTTNVLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFA 583
            A  W ND +V++A+   +E  +  W  C+ +L Y  +  S ++YHRNL   G++ LI+SGD DM +PY G+E W K++   +   W+PW+ + QVAGF   YA      LTF T+KGAGHT PEYKP+E L+  +R+ A
Sbjct:  356 ATKWLNDPAVRKAVHAKEEKAIGNWELCSSNLEYRHDTGSMIEYHRNLTLSGFRALIFSGDHDMCVPYTGSEAWTKAMGYKVVDEWRPWMSNNQVAGFTQGYAN----NLTFLTIKGAGHTVPEYKPRESLDFYSRFLA 490          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: SCP11_ARATH (Serine carboxypeptidase-like 11 OS=Arabidopsis thaliana GN=SCPL11 PE=2 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.092e-29
Identity = 64/140 (45.71%), Postives = 89/140 (63.57%), Query Frame = -1
Query:  158 WANDKSVQRALGIQEGMVKEWRRCNK-SLSYTTNVLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFAMYPL 574
            WAND+SV+ AL + +  + +W RCN  S  Y  ++ SS+ YH N    GY+ LIYSGD D+ +P++ T+ WIKSLN +I   W+PW++  Q+ G+   Y+ K    +TFATVKG+GHTA E KP+E   M  RW    PL
Sbjct:  299 WANDESVRDALHVNKRSIGKWERCNYLSKPYNKDIKSSVPYHMNNSVSGYRSLIYSGDHDLVVPFLATQAWIKSLNYSIIDEWRPWMIRDQITGYTRTYSNK----MTFATVKGSGHTA-ENKPQESFIMFRRWINGQPL 433          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: SCP15_ARATH (Serine carboxypeptidase-like 15 OS=Arabidopsis thaliana GN=SCPL15 PE=2 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 2.432e-29
Identity = 63/150 (42.00%), Postives = 93/150 (62.00%), Query Frame = -1
Query:  158 CRHQNYLYAPTWANDKSVQRALGIQEGMVKEWRRCNKSLSYTTNVLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFAMYPL 607
            C    YL +  WA++++V+RAL + +G    W RC+  +    ++ SS+ +H N   +GY+ L+ SGD DM IP++GT+ WI+SLN +I   W+PW++  QVAG+   YA K    +T ATVKG GHT  EYKP+E   +  RW +  PL
Sbjct:  292 CYTYRYLLSEYWADNETVRRALKVVKGSKGTWERCDYRVLSNQDIKSSIPFHINNSIRGYRSLVISGDHDMTIPFLGTQAWIRSLNYSITEKWRPWMILDQVAGYTKTYANK----MTLATVKGGGHTL-EYKPEENSVLFKRWISGQPL 436          
The following BLAST results are available for this feature:
BLAST of CF836278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
SCP4_ARATH1.800e-3242.67Serine carboxypeptidase-like 4 OS=Arabidopsis thal... [more]
SCP10_ARATH2.350e-3243.33Serine carboxypeptidase-like 10 OS=Arabidopsis tha... [more]
SCP9_ARATH6.839e-3243.33Serine carboxypeptidase-like 9 OS=Arabidopsis thal... [more]
SCP5_ARATH8.932e-3243.33Serine carboxypeptidase-like 5 OS=Arabidopsis thal... [more]
SCP14_ARATH1.167e-3145.33Serine carboxypeptidase-like 14 OS=Arabidopsis tha... [more]
SCP16_ARATH2.200e-3044.52Serine carboxypeptidase-like 16 OS=Arabidopsis tha... [more]
SCP19_ARATH8.360e-3043.42Serine carboxypeptidase-like 19 OS=Arabidopsis tha... [more]
SCP21_ARATH1.092e-2943.17Serine carboxypeptidase-like 21 OS=Arabidopsis tha... [more]
SCP11_ARATH1.092e-2945.71Serine carboxypeptidase-like 11 OS=Arabidopsis tha... [more]
SCP15_ARATH2.432e-2942.00Serine carboxypeptidase-like 15 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02L10_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02L10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836278 ID=CF836278; Name=CF836278; organism=Citrus sinensis; type=EST; length=715bp
TTTTTTTTTTTTTTAATACATTAATTTAATATTATATAAAATCCATATAG
TACAGAATAGCGCTAAACACTGTATAAAATTATTCTAATATAATATTAAT
ACAATACAACATAATCCAATACATTTGGATATTCTCAAAGTACTGAACAT
GGCTTCAGAGAGGATACATGGCAAACCACCTGTTAATCATTTCGAGGCAT
TCCTTAGGCTTGTACTCTGGAGCTGTATGACCTGCTCCCTTTACTGTGGC
AAATGTCAAACGGTAAAGGTTCTTTTCAGCATACCGCATCCAAAATCCTG
CAACTTGGCCGTCCACAAGCCATGGCTGCCAGCCACTATCAATCGTCAAA
TTTAATGACTTAATCCATGTTTCTGTGCCTACATATGGAATTTCCATGTC
CACATCGCCACTGTAAATCAAAACTTGGTAGCCCTTCTTGATGAGGTTGC
GATGATAATCAAGACTACTAAGGACATTTGTTGTGTAAGATAAACTCTTA
TTGCATCTCCTCCATTCTTTTACCATCCCCTCCTGAATTCCAAGAGCCCT
TTGGACAGATTTGTCATTTGCCCATGTTGGAGCGTATAAATAGTTTTGAT
GCCGACACCAAAGTTTTGGAGCTGGCTGAGCTGGCAAAAAGAGCAAATCT
AAATAATCTTCTTCATCTTCCACGACGCTACCATCTCGGGGGCTCAATCG
TGTTGGTTTTGGGGA
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