CF836278

Overview
NameCF836278
Unique NameCF836278
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length715
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8966 contig Csv1_Contig8966:228..942. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: SCP12_ARATH (Serine carboxypeptidase-like 12 OS=Arabidopsis thaliana GN=SCPL12 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.432e-29
Identity = 61/141 (43.26%), Postives = 89/141 (63.12%), Query Frame = -1
Query:  158 WANDKSVQRALGIQEGMVKEWRRCN--KSLSYTTNVLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFAMYPL 574
            W ND+SV+ AL + +  + +W RC     + Y  ++ +S+ YH N    GY+ LIYSGD D+ +P++ T+ WIKSLN +I   W+PW++  Q+AG+   Y+ K    +TFATVKG+GHTA EYKP E   M  RW + + L
Sbjct:  300 WINDESVRDALHVNKSSIGKWERCTYQNRIPYNKDINNSIPYHMNNSISGYRSLIYSGDHDLVVPFLATQAWIKSLNYSIIHEWRPWMIKDQIAGYTRTYSNK----MTFATVKGSGHTA-EYKPNETFIMFQRWISGHDL 435          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: CBP1_ORYSJ (Serine carboxypeptidase 1 OS=Oryza sativa subsp. japonica GN=CBP1 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.243e-29
Identity = 60/139 (43.17%), Postives = 82/139 (58.99%), Query Frame = -1
Query:  170 APTWANDKSVQRALGIQE-GMVKEWRRCNKSLSYTTNVLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFA 583
            A  W N+  V+ A+  Q    +  W  C   L +  +  S + YH+NL  +GY+  IYSGD DM +PY GTE W +SL   +   W+PW ++GQV+G+   Y     + LTFAT+KGAGHT PEYKP+E L   +RW A
Sbjct:  372 ATAWLNNDDVRAAIHAQPVSSIGSWLICTNVLDFIHDAGSMISYHKNLTGQGYRAFIYSGDHDMCVPYTGTEAWTRSLGYGVIDSWRPWHLNGQVSGYTQGYE----HGLTFATIKGAGHTVPEYKPQESLAFYSRWLA 506          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: SCP20_ARATH (Serine carboxypeptidase-like 20 OS=Arabidopsis thaliana GN=SCPL20 PE=2 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.207e-28
Identity = 59/137 (43.07%), Postives = 84/137 (61.31%), Query Frame = -1
Query:  176 APTWANDKSVQRALGI-QEGMVKEWRRCNKSLSYTTNVLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRW 583
            A  W ND  +++A+   +E  +  W  C+  LS+  +  S +D+HRNL   GY+ LIYSGD DM +P+ G+E W KSL   +   W+ W+ + QVAG+   YA      LTF T+KGAGHT PEYKP+E L+  +R+
Sbjct:  359 ATAWLNDPEIRKAIHTKEESEIGRWELCSGKLSFYHDAGSMIDFHRNLTLSGYRALIYSGDHDMCVPFTGSEAWTKSLGYKVIDEWRAWISNDQVAGYTQGYAN----NLTFLTIKGAGHTVPEYKPREALDFYSRF 491          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: CBP1_HORVU (Serine carboxypeptidase 1 OS=Hordeum vulgare GN=CBP1 PE=1 SV=4)

HSP 1 Score: 123.635 bits (309), Expect = 1.022e-27
Identity = 57/139 (41.01%), Postives = 83/139 (59.71%), Query Frame = -1
Query:  170 APTWANDKSVQRALGIQE-GMVKEWRRCNKSLSYTTNVLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFA 583
            A  W ++ +V+ A+  Q    +  W  C   L +  +  S + YH+NL  +GY+ +I+SGD DM +P+ G+E W KSL   +   W+PW+ +GQV+G    Y E   + LTFAT+KGAGHT PEYKP+E     +RW A
Sbjct:  361 ATAWLDNAAVRSAIHAQSVSAIGPWLLCTDKLYFVHDAGSMIAYHKNLTSQGYRAIIFSGDHDMCVPFTGSEAWTKSLGYGVVDSWRPWITNGQVSG----YTEGYEHGLTFATIKGAGHTVPEYKPQEAFAFYSRWLA 495          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: SCP32_ARATH (Serine carboxypeptidase-like 32 OS=Arabidopsis thaliana GN=SCPL32 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.639e-19
Identity = 52/147 (35.37%), Postives = 78/147 (53.06%), Query Frame = -1
Query:  161 YAPTWANDKSVQRALGIQEGM-VKEWRRCNKSL----SYTTNVLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFAMYP 586
            YA  + N   VQ+AL   +G+ +K W  CN  +    ++T +  S L  ++ LI  G++V +YSGD D  +P + T   I  L L I + W+PW  + QV+G++  Y       LTFAT +GAGH  P +KP E L   + +    P
Sbjct:  317 YAKVFYNRADVQKALHATDGVHLKNWTICNDDILNHWNWTDSKRSVLPIYKKLIAGGFRVWVYSGDTDGRVPVLSTRYCINKLELPIKTAWRPWYHETQVSGWFQEYE-----GLTFATFRGAGHDVPSFKPSESLAFFSAFLNGVP 458          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: SCP30_ARATH (Putative serine carboxypeptidase-like 30 OS=Arabidopsis thaliana GN=SCPL30 PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 6.639e-19
Identity = 54/146 (36.99%), Postives = 79/146 (54.11%), Query Frame = -1
Query:  158 YAPTWANDKSVQRALGIQEGM-VKEWRRCNKSL--SYTTNVLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFAMYPL 586
            Y   + N   VQ+AL   +G+ +K W  CN  +  ++T  V S L  ++ LI  G ++ +YSGD D  IP +GT   + +L L I + W+PW  + QV+G+   Y       LTFAT +GAGHT P +KP   L  I+ +    PL
Sbjct:  340 YVKVYYNRADVQKALHASDGVNLKNWSICNMEIFHNWTYVVQSVLPIYQKLIAGGLRIWVYSGDTDGCIPVLGTRYSLNALGLPIKTAWRPWYHEKQVSGWVQEYD-----GLTFATFRGAGHTVPSFKPSSSLAFISAFVKGVPL 480          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: SCP36_ARATH (Serine carboxypeptidase-like 36 OS=Arabidopsis thaliana GN=SCPL36 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.304e-18
Identity = 55/151 (36.42%), Postives = 77/151 (50.99%), Query Frame = -1
Query:  158 NYLYAPTWANDKSVQRALGIQEGMVK-EWRRCNKSLSYTTN----VLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFAMYPL 595
            NYL A  + N K VQ A+      +  EW  CN  L +  N     +S     + L+ KG +V++Y+GDVD+ IP+  T   +K++NLT+   W+PW   G V GF   Y       LTF TVKGAGH+ P  +P   L +   +    PL
Sbjct:  334 NYLKA--YLNIKEVQEAIHANTTKIPYEWTSCNTKLLWEWNEKDRYVSLTPILQELMGKGVRVMLYNGDVDLVIPFTSTLAVVKTMNLTVVKEWRPWFTGGHVGGFTEDYKG----NLTFVTVKGAGHSVPTDQPIHALNIFTSFIRNTPL 478          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: SCP38_ARATH (Serine carboxypeptidase-like 38 OS=Arabidopsis thaliana GN=SCPL38 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.621e-18
Identity = 52/148 (35.14%), Postives = 80/148 (54.05%), Query Frame = -1
Query:  158 YAPTWANDKSVQRALGIQEGMVK-EWRRCNKSLSYT----TNVLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFAMYPL 586
            Y   + N ++VQ A+      +  EW+ CN  L+          S +    +L+ +G +VL+YSGDVD  IP+  T   +K++NLT+ + W+PW   GQ+ GF   Y E+N   LT+ATVKG+GH+ P  +P   L +   +    PL
Sbjct:  340 YVKAYLNSENVQEAMHANTTKLPYEWKACNHYLNSVWIDADKDASMVPILHDLMGEGVRVLVYSGDVDAAIPFTATMAVLKTMNLTVVNEWRPWFTGGQLGGFTEDY-ERN---LTYATVKGSGHSVPLDQPVHALNLFTSFIRNTPL 483          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: SCP37_ARATH (Serine carboxypeptidase-like 37 OS=Arabidopsis thaliana GN=SCPL37 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 8.116e-17
Identity = 51/148 (34.46%), Postives = 73/148 (49.32%), Query Frame = -1
Query:  158 YAPTWANDKSVQRALGIQEGMVK-EWRRCNKSL----SYTTNVLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFAMYPL 586
            Y   + N K VQ+A+      +  EW  CN  L    S        +     L+ +G +V+IY+GDVD+EIP+  T   +K +NLT+   ++PW   GQ+ GF   Y       LTF TVKGAGH+ P  +P   L +   +    PL
Sbjct:  340 YLKAYLNRKKVQKAIHANTTKLPYEWTSCNNELTENWSENDRDTPMIPILHELMGEGVRVMIYNGDVDLEIPFASTLAVVKEMNLTVVKEFRPWFTGGQLGGFTEDYKG----NLTFVTVKGAGHSVPTDQPIHALNIFTSFIRNTPL 483          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: SCP31_ARATH (Serine carboxypeptidase-like 31 OS=Arabidopsis thaliana GN=SCPL31 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.808e-16
Identity = 48/145 (33.10%), Postives = 76/145 (52.41%), Query Frame = -1
Query:  161 YAPTWANDKSVQRALGIQEGM-VKEWRRCNKSL--SYTTNVLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFAMYP 586
            YA  + N   VQ++L   +G+ +K W  CN  +  ++T +  S L  +  LI  G ++ +YSGD D  +P + T   + +L L I + W+PW  + QV+G+   Y       LTFAT +GAGH  P +KP   L   + + +  P
Sbjct:  321 YARVFYNRADVQKSLHASDGVNLKNWSICNMEIFNNWTGSNPSVLPIYEKLIAGGLRIWVYSGDTDGRVPVLATRYSLNALELPIKTAWRPWYHEKQVSGWLQEYE-----GLTFATFRGAGHAVPCFKPSSSLAFFSAFLSGVP 460          
The following BLAST results are available for this feature:
BLAST of CF836278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
SCP12_ARATH2.432e-2943.26Serine carboxypeptidase-like 12 OS=Arabidopsis tha... [more]
CBP1_ORYSJ9.243e-2943.17Serine carboxypeptidase 1 OS=Oryza sativa subsp. j... [more]
SCP20_ARATH1.207e-2843.07Serine carboxypeptidase-like 20 OS=Arabidopsis tha... [more]
CBP1_HORVU1.022e-2741.01Serine carboxypeptidase 1 OS=Hordeum vulgare GN=CB... [more]
SCP32_ARATH6.639e-1935.37Serine carboxypeptidase-like 32 OS=Arabidopsis tha... [more]
SCP30_ARATH6.639e-1936.99Putative serine carboxypeptidase-like 30 OS=Arabid... [more]
SCP36_ARATH4.304e-1836.42Serine carboxypeptidase-like 36 OS=Arabidopsis tha... [more]
SCP38_ARATH5.621e-1835.14Serine carboxypeptidase-like 38 OS=Arabidopsis tha... [more]
SCP37_ARATH8.116e-1734.46Serine carboxypeptidase-like 37 OS=Arabidopsis tha... [more]
SCP31_ARATH1.808e-1633.10Serine carboxypeptidase-like 31 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02L10_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02L10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836278 ID=CF836278; Name=CF836278; organism=Citrus sinensis; type=EST; length=715bp
TTTTTTTTTTTTTTAATACATTAATTTAATATTATATAAAATCCATATAG
TACAGAATAGCGCTAAACACTGTATAAAATTATTCTAATATAATATTAAT
ACAATACAACATAATCCAATACATTTGGATATTCTCAAAGTACTGAACAT
GGCTTCAGAGAGGATACATGGCAAACCACCTGTTAATCATTTCGAGGCAT
TCCTTAGGCTTGTACTCTGGAGCTGTATGACCTGCTCCCTTTACTGTGGC
AAATGTCAAACGGTAAAGGTTCTTTTCAGCATACCGCATCCAAAATCCTG
CAACTTGGCCGTCCACAAGCCATGGCTGCCAGCCACTATCAATCGTCAAA
TTTAATGACTTAATCCATGTTTCTGTGCCTACATATGGAATTTCCATGTC
CACATCGCCACTGTAAATCAAAACTTGGTAGCCCTTCTTGATGAGGTTGC
GATGATAATCAAGACTACTAAGGACATTTGTTGTGTAAGATAAACTCTTA
TTGCATCTCCTCCATTCTTTTACCATCCCCTCCTGAATTCCAAGAGCCCT
TTGGACAGATTTGTCATTTGCCCATGTTGGAGCGTATAAATAGTTTTGAT
GCCGACACCAAAGTTTTGGAGCTGGCTGAGCTGGCAAAAAGAGCAAATCT
AAATAATCTTCTTCATCTTCCACGACGCTACCATCTCGGGGGCTCAATCG
TGTTGGTTTTGGGGA
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