CF836278

Overview
NameCF836278
Unique NameCF836278
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length715
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8966 contig Csv1_Contig8966:228..942. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: SCP29_ARATH (Serine carboxypeptidase-like 29 OS=Arabidopsis thaliana GN=SCPL29 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.361e-16
Identity = 49/149 (32.89%), Postives = 79/149 (53.02%), Query Frame = -1
Query:  149 YAPTWANDKSVQRALGIQEGMV-KEWRRCNKSLS--YTTNVLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFAMYPL*SH 586
            +   + N   VQ+AL +  G+   +W  C+  +S  +  +  S L+ +  LI  G ++ ++SGD D  +P   T   I +LNL   S + PW +DGQV G+  +YA      L F TV+GAGH  P ++PK+ L +   + +  PL +H
Sbjct:  321 HTTVYFNLPEVQKALHVPPGLAPSKWDTCSDVVSEHWNDSPSSVLNIYHELIAAGLRIWVFSGDADAVVPVTSTRYSIDALNLRPLSAYGPWYLDGQVGGWSQQYA-----GLNFVTVRGAGHEVPLHRPKQALALFKAFISGTPLSTH 464          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: SCP40_ARATH (Serine carboxypeptidase-like 40 OS=Arabidopsis thaliana GN=SCPL40 PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.084e-16
Identity = 47/145 (32.41%), Postives = 75/145 (51.72%), Query Frame = -1
Query:  158 YAPTWANDKSVQRALGIQEGMVK-EWRRCNKSLS-YTTNVLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFAMYPL 586
            Y   + N   VQ AL      +  EW+ C+  +  +  +  + +   + L+ +G +V ++SGD D  IP   T+  +K +NLT  + W PW + G+V G    Y E+   +LTFATV+GAGH  P ++PK  L +   +    PL
Sbjct:  356 YVQAYLNRPEVQAALHANATKLPYEWQPCSSVIKKWNDSPTTVIPLIKELMGQGVRVWVFSGDTDGRIPVTSTKYSLKKMNLTAKTAWHPWYLGGEVGG----YTEEYKGKLTFATVRGAGHQVPSFQPKRSLSLFIHFLNDTPL 496          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: SCP33_ARATH (Serine carboxypeptidase-like 33 OS=Arabidopsis thaliana GN=SCPL33 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.261e-16
Identity = 51/157 (32.48%), Postives = 77/157 (49.04%), Query Frame = -1
Query:  188 PAPKLWCRHQNYL---------YAPTWANDKSVQRALGIQEGMVKEWRRCNKSL--SYTTNVLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEM 625
            PA K W +   +          YA  + N   V+ +L      V  W+ CN S+  +Y   V S L  +  LIK G ++ +YSGD D  +P +G+   +++L +++ S W+ W  + QV G    Y       LTF TV+GAGH  P  KP+E L +
Sbjct:  306 PAVKDWFKRVRWFEGYDPCYSNYAEEYFNRVDVRLSLHATTRNVARWKVCNDSILQTYHFTVSSMLPTYSKLIKAGLKIWVYSGDADGRVPVIGSRYCVEALGISVKSEWRSWFHNHQVGGRITEYEG----GLTFVTVRGAGHLVPLNKPEEALAL 458          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: SCP34_ARATH (Serine carboxypeptidase-like 34 OS=Arabidopsis thaliana GN=SCPL34 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 8.973e-16
Identity = 48/139 (34.53%), Postives = 71/139 (51.08%), Query Frame = -1
Query:  176 YAPTWANDKSVQRALGIQEGMVK-EWRRCNKSLSYTTNVLSS-LDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRW 586
            Y   + N K VQ AL      +   W  C+ ++S+ ++  +S L   R L+  G +V ++SGD D  IP   T   +K L L I   W PW    QV G+ + Y       L F TV+GAGH  P +KP+E L++I+ +
Sbjct:  355 YTEKYMNRKDVQEALHANVTNISYPWTHCSDTVSFWSDAPASMLPTLRTLVSAGLRVWVFSGDTDGRIPVTATRYSLKKLGLKIVQDWTPWYTKLQVGGWTVEYD-----GLMFVTVRGAGHQVPTFKPREALQLIHHF 488          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: SCP24_ARATH (Serine carboxypeptidase 24 OS=Arabidopsis thaliana GN=SCPL24 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.596e-15
Identity = 47/142 (33.10%), Postives = 71/142 (50.00%), Query Frame = -1
Query:  170 YAPTWANDKSVQRALGIQ-EGMVKEWRRCNKSL--SYTTNVLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFA 586
            YA  + N   VQRA+     G+  +W  C+  L  ++  +  + L  ++ L   G ++ I+SGD D  +P   T   +  LNL + + W PW  D QV G+   Y       LTFATV+GAGH  P ++PK  L +   + A
Sbjct:  321 YAEKYFNRPDVQRAMHANVTGIRYKWTACSDVLIKTWKDSDKTMLPIYKELAASGLRIWIFSGDTDSVVPVTATRFSLSHLNLPVKTRWYPWYTDNQVGGWTEVYK-----GLTFATVRGAGHEVPLFEPKRALILFRSFLA 457          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: PPGB_MOUSE (Lysosomal protective protein OS=Mus musculus GN=Ctsa PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.596e-15
Identity = 53/146 (36.30%), Postives = 78/146 (53.42%), Query Frame = -1
Query:  161 WANDKSVQRALGIQEGMVKEWRRCN--KSLSYTTNVLS-SLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVD-----GQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFAMYP 574
            + N+  V++AL I E + + W  CN   +L Y     S +  Y + L  + YQ+L+Y+GDVDM   ++G E ++ SLN  ++   +PWLVD      QVAGF      K    +TF T+KGAGH  P  KP+    M +R+    P
Sbjct:  334 YLNNPYVRKALHIPESLPR-WDMCNFLVNLQYRRLYQSMNSQYLKLLSSQKYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVDYGESGEQVAGF-----VKECSHITFLTIKGAGHMVPTDKPRAAFTMFSRFLNKEP 473          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: PPGB_BOVIN (Lysosomal protective protein OS=Bos taurus GN=CTSA PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.921e-15
Identity = 49/148 (33.11%), Postives = 77/148 (52.03%), Query Frame = -1
Query:  161 NYLYAPTWANDKSVQRALGIQEGMVKEWRRCN--KSLSYTTNVLSSLDYHRNLIK-KGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFAMYP 595
            N   A  + ND  V++AL I E + + W  CN   ++ Y     S    +  L+  + Y++L+Y+GDVDM   ++G E ++ SLN  ++   +PWLVD   +G  +    K    + F T+KGAGH  P  KP+  L M +R+    P
Sbjct:  332 NTTAASNYLNDPHVRKALHIPEQLPR-WDLCNFLVNIQYRRLYQSMCSQYLKLLSAQKYRILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVDYGESGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPQAALTMFSRFLNRQP 478          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: SCP39_ARATH (Serine carboxypeptidase-like 39 OS=Arabidopsis thaliana GN=SCPL39 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.296e-14
Identity = 51/148 (34.46%), Postives = 74/148 (50.00%), Query Frame = -1
Query:  158 YAPTWANDKSVQRALGIQEGMVKEWRRCNKSLSYTTNVL----SSLDYHRNLIKKGY-QVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFAMYPL 586
            Y   + N + VQR++ + + +   W  CN++  +  N      S L   + L+K    +V +Y+GD D  IP   T   +K +NLT  + W PW  +GQV GF   Y  K  +R  +ATV GAGH  P YKPK  L +   +    PL
Sbjct:  355 YIAAYLNREDVQRSMHVTK-LPHTWMLCNEATGFNWNQTDYSASMLPILKELMKHDQLRVWVYTGDTDTVIPLTVTMHALKMMNLTAVTDWLPWFSEGQVGGFTEEY--KGNFR--YATVIGAGHEVPLYKPKAALTLFKHFIRNSPL 497          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: SCP25_ARATH (Serine carboxypeptidase-like 25 OS=Arabidopsis thaliana GN=SCPL25 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.692e-14
Identity = 50/146 (34.25%), Postives = 71/146 (48.63%), Query Frame = -1
Query:  158 YAPTWANDKSVQRALGIQEGMVK-EWRRCNKSLSYTTNVLSS--LDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFAMYPL 586
            YA  + N   VQ+AL      +  +W  C++ L+   N   S  L  +R +I  G +V ++SGDVD  +P   T   +  L+L+    W PW V  QV G W    E     LTF TV+GAGH  P +KP+   E+   +    PL
Sbjct:  330 YAEIYYNRPDVQKALHANTTKIPYKWTACSEVLNRNWNDTDSTVLPIYREMIAGGIRVWVFSGDVDSVVPVTATRYSLARLSLSTKLPWYPWYVKKQVGG-WTEVYE----GLTFVTVRGAGHEVPLFKPRAAFELFKYFLRGKPL 470          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: SCP23_ARATH (Putative serine carboxypeptidase-like 23 OS=Arabidopsis thaliana GN=SCPL23 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.692e-14
Identity = 45/142 (31.69%), Postives = 71/142 (50.00%), Query Frame = -1
Query:  170 YAPTWANDKSVQRALGIQEGMVK-EWRRCNKSLS--YTTNVLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFA 586
            YA  + N   VQRA+      +  +W  CN  ++  +  +  S L  ++ L   G ++ ++SGD D  +P  GT   +  LNL + + W PW  + QV G W    E     LTFAT++GAGH  P  +P+  L ++  + A
Sbjct:  310 YAEIYYNRPDVQRAMHANLTSIPYKWTLCNMVVNNNWKDSEFSMLPIYKELTAAGLRIWVFSGDTDAVVPVTGTRLALSKLNLPVKTPWYPWYSEKQVGG-WTEVYE----GLTFATIRGAGHEVPVLQPERALTLLRSFLA 446          
The following BLAST results are available for this feature:
BLAST of CF836278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
SCP29_ARATH2.361e-1632.89Serine carboxypeptidase-like 29 OS=Arabidopsis tha... [more]
SCP40_ARATH3.084e-1632.41Serine carboxypeptidase-like 40 OS=Arabidopsis tha... [more]
SCP33_ARATH5.261e-1632.48Serine carboxypeptidase-like 33 OS=Arabidopsis tha... [more]
SCP34_ARATH8.973e-1634.53Serine carboxypeptidase-like 34 OS=Arabidopsis tha... [more]
SCP24_ARATH7.596e-1533.10Serine carboxypeptidase 24 OS=Arabidopsis thaliana... [more]
PPGB_MOUSE7.596e-1536.30Lysosomal protective protein OS=Mus musculus GN=Ct... [more]
PPGB_BOVIN9.921e-1533.11Lysosomal protective protein OS=Bos taurus GN=CTSA... [more]
SCP39_ARATH1.296e-1434.46Serine carboxypeptidase-like 39 OS=Arabidopsis tha... [more]
SCP25_ARATH1.692e-1434.25Serine carboxypeptidase-like 25 OS=Arabidopsis tha... [more]
SCP23_ARATH1.692e-1431.69Putative serine carboxypeptidase-like 23 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02L10_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02L10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836278 ID=CF836278; Name=CF836278; organism=Citrus sinensis; type=EST; length=715bp
TTTTTTTTTTTTTTAATACATTAATTTAATATTATATAAAATCCATATAG
TACAGAATAGCGCTAAACACTGTATAAAATTATTCTAATATAATATTAAT
ACAATACAACATAATCCAATACATTTGGATATTCTCAAAGTACTGAACAT
GGCTTCAGAGAGGATACATGGCAAACCACCTGTTAATCATTTCGAGGCAT
TCCTTAGGCTTGTACTCTGGAGCTGTATGACCTGCTCCCTTTACTGTGGC
AAATGTCAAACGGTAAAGGTTCTTTTCAGCATACCGCATCCAAAATCCTG
CAACTTGGCCGTCCACAAGCCATGGCTGCCAGCCACTATCAATCGTCAAA
TTTAATGACTTAATCCATGTTTCTGTGCCTACATATGGAATTTCCATGTC
CACATCGCCACTGTAAATCAAAACTTGGTAGCCCTTCTTGATGAGGTTGC
GATGATAATCAAGACTACTAAGGACATTTGTTGTGTAAGATAAACTCTTA
TTGCATCTCCTCCATTCTTTTACCATCCCCTCCTGAATTCCAAGAGCCCT
TTGGACAGATTTGTCATTTGCCCATGTTGGAGCGTATAAATAGTTTTGAT
GCCGACACCAAAGTTTTGGAGCTGGCTGAGCTGGCAAAAAGAGCAAATCT
AAATAATCTTCTTCATCTTCCACGACGCTACCATCTCGGGGGCTCAATCG
TGTTGGTTTTGGGGA
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