CF836278

Overview
NameCF836278
Unique NameCF836278
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length715
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: PPGB_HUMAN (Lysosomal protective protein OS=Homo sapiens GN=CTSA PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.210e-14
Identity = 53/153 (34.64%), Postives = 78/153 (50.98%), Query Frame = -1
Query:  161 NYLYAPTWANDKSVQRALGIQEGMVKEWRRCN--KSLSYTTNVLS-SLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLV-----DGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFAMYP 595
            N   A T+ N+  V++AL I E  + +W  CN   +L Y     S +  Y + L  + YQ+L+Y+GDVDM   ++G E ++ SLN  ++   +PWLV       Q+AGF      K    + F T+KGAGH  P  KP     M +R+    P
Sbjct:  333 NTTAASTYLNNPYVRKALNIPE-QLPQWDMCNFLVNLQYRRLYRSMNSQYLKLLSSQKYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGF-----VKEFSHIAFLTIKGAGHMVPTDKPLAAFTMFSRFLNKQP 479          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: SCP26_ARATH (Serine carboxypeptidase-like 26 OS=Arabidopsis thaliana GN=SCPL26 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.431e-14
Identity = 45/146 (30.82%), Postives = 71/146 (48.63%), Query Frame = -1
Query:  158 YAPTWANDKSVQRALGIQ-EGMVKEWRRCNKSLS--YTTNVLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFAMYPL 586
            Y+  + N   VQ+A+     G+   W+ C+  +   +  + LS L  ++ LI  G ++ ++SGD D  +P  GT   I++L L   S W PW  DGQV G+   Y       LT  T+ GAGH  P ++P+    +   +    PL
Sbjct:  310 YSGMYFNSPEVQKAMHANITGLAYPWKGCSDIVGEKWADSPLSMLPIYKELIAAGLRIWVFSGDTDSVVPITGTRYSIRALKLQPLSKWYPWNDDGQVGGWSQVYK-----GLTLVTIHGAGHEVPLFRPRRAFLLFQSFLDNKPL 450          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: SCP22_ARATH (Serine carboxypeptidase-like 22 OS=Arabidopsis thaliana GN=SCPL22 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.433e-13
Identity = 47/144 (32.64%), Postives = 68/144 (47.22%), Query Frame = -1
Query:  170 YAPTWANDKSVQRALGIQEGMVK-EWRRCNKSLSYTTNVLSS----LDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFA 586
            YA  + N   VQRA+      +  +W  C+ S+    N   S    L  ++ LI  G ++ +YSGD D  IP   T   +  LNL + + W PW    QV G    Y       LTF TV+GAGH  P ++P+  L ++  + A
Sbjct:  318 YAEIYYNRPEVQRAMHANHTAIPYKWTACSDSVFNNWNWRDSDNSMLPIYKELIAAGLRIWVYSGDTDSVIPVTATRYSLGKLNLRVKTRWYPWYSGNQVGGRTEVYE-----GLTFVTVRGAGHEVPFFQPQSALILLRSFLA 456          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: NF314_NAEFO (Virulence-related protein Nf314 OS=Naegleria fowleri PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.444e-13
Identity = 46/132 (34.85%), Postives = 67/132 (50.76%), Query Frame = -1
Query:  176 VQRALGIQEGMVKE--WRRCNKSLSYTTNVLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVD---GQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRW 556
            VQ+ALG++        W  C   ++YT    + L ++  L+    ++L+YSGD DM +  +GT+  I  L L   S W+ W  D   G V G ++R  EK+   LTF TV+GAGH  P  KP     M   +
Sbjct:  346 VQQALGVRRKTADPNGWNICTGIINYTQVYSTILPFYAKLLPH-IRILVYSGDTDMVVNGLGTQAAIDKLQLQETSSWRTWEFDSALGTVVGGYIRKFEKSGKGLTFITVRGAGHMVPLVKPDSAFYMFKNF 476          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: CBP2_HORVU (Serine carboxypeptidase 2 OS=Hordeum vulgare GN=CBP2 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.584e-12
Identity = 43/148 (29.05%), Postives = 72/148 (48.65%), Query Frame = -1
Query:  158 YAPTWANDKSVQRAL--GIQEGMVKEWRRCNKSLS--YTTNVLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYR-LTFATVKGAGHTAPEYKPKECLEMINRWFAMYPL 586
            Y+  + N + VQ AL   +   M   W  C+ +++  +     S L  +R LI  G ++ ++SGD D  +P   T   I +L L   + W PW  D Q  G W       +Y+ LT  +V+GAGH  P ++P++ L +  ++    P+
Sbjct:  324 YSTAYYNRRDVQTALHANVTGAMNYTWTNCSDTINTHWHDAPRSMLPIYRELIAAGLRIWVFSGDTDAVVPLTATRYSIGALGLATTTSWYPWYDDLQEVGGW-----SQVYKGLTLVSVRGAGHEVPLHRPRQALILFQQFLQGKPM 466          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: CBP21_HORVU (Serine carboxypeptidase II-1 (Fragment) OS=Hordeum vulgare GN=CXP;2-1 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.069e-12
Identity = 43/146 (29.45%), Postives = 71/146 (48.63%), Query Frame = -1
Query:  158 YAPTWANDKSVQRALGIQ-EGMVKEWRRCNKSLS--YTTNVLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFAMYPL 586
            Y+  + N   VQ+A      G+   W  C+  LS  +  +  S L  +R LI  G ++ ++SGD D  +P   T   I +L L   + W PW  + +VAG+   Y       LT  T++GAGH  P ++P++ L++   +    P+
Sbjct:  174 YSTKYYNLPEVQKAFRANVTGIPYSWTACSDVLSDHWKDSPRSMLPIYRELIAAGIRIWVFSGDADSVVPLTATRYSIDALYLPTVTNWYPWYDEEEVAGWCQVYK-----GLTLVTIRGAGHEVPLHRPQQALKLFEHFLQDKPM 314          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: SCP35_ARATH (Serine carboxypeptidase-like 35 OS=Arabidopsis thaliana GN=SCPL35 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.702e-12
Identity = 46/154 (29.87%), Postives = 68/154 (44.16%), Query Frame = -1
Query:  158 YAPTWANDKSVQRALGIQ-----------EGMVKEWRRCNKSLSYTTNVLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFAMYPL 586
            YA  + N K VQ AL               G++K W     ++         +   + L+  G ++ IYSGD D  +P   T   IK + L ++S W+ W    QVAG+   YA      L F TV+GAGH  P   P + L + + + +  PL
Sbjct:  335 YAENYFNRKDVQVALHANVTNLPYPYSPCSGVIKRWSDAPSTM---------IPIIQKLLTGGLRIWIYSGDTDGRVPVTSTRYSIKKMGLKVESPWRSWFHKSQVAGWVETYAG----GLNFVTVRGAGHQVPALAPAQSLTLFSHFISSVPL 475          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: CBPY_PICPG (Carboxypeptidase Y OS=Pichia pastoris (strain GS115) GN=PRC1 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.861e-12
Identity = 52/151 (34.44%), Postives = 73/151 (48.34%), Query Frame = -1
Query:  170 YAPTWANDKSVQRALGIQEGMVKEWRRCNKSLSYTTNVLSSLD----YHRN---LIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGW-----QPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFA 586
            +  T+ N K VQ ALG +   V  +  CN  ++   N L + D    YH +   L+ KG  VLIY+GD D    ++G   W   L      G+     Q WLV+G+ AG +     KN    T+  V  AGH AP  +P+   EM+NRW +
Sbjct:  377 FIDTYLNQKFVQDALGAE---VDTYESCNFEIN--RNFLFAGDWMKPYHEHVSSLLNKGLPVLIYAGDKDFICNWLGNRAWTDVLPWVDADGFEKAEVQDWLVNGRKAGEF-----KNYSNFTYLRVYDAGHMAPYDQPENSHEMVNRWIS 517          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: CBP2_WHEAT (Serine carboxypeptidase 2 OS=Triticum aestivum GN=CBP2 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 7.861e-12
Identity = 42/147 (28.57%), Postives = 70/147 (47.62%), Query Frame = -1
Query:  158 YAPTWANDKSVQRAL--GIQEGMVKEWRRCNKSLS--YTTNVLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWIKSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFAMYPL 586
            Y+  + N + VQ AL   +   M   W  C+ +++  +     S L  +R LI  G ++ ++SGD D  +P   T   I +L L   + W PW  D +V G+   Y       LT  +V+GAGH  P ++P++ L +   +    P+
Sbjct:  295 YSTAYYNRRDVQMALHANVTGAMNYTWATCSDTINTHWHDAPRSMLPIYRELIAAGLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYK-----GLTLVSVRGAGHEVPLHRPRQALVLFQYFLQGKPM 436          
BLAST of CF836278 vs. ExPASy Swiss-Prot
Match: SCP45_ARATH (Serine carboxypeptidase-like 45 OS=Arabidopsis thaliana GN=SCPL45 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.027e-11
Identity = 49/151 (32.45%), Postives = 70/151 (46.36%), Query Frame = -1
Query:  158 WANDKSVQRALGIQEGMVKEWRRCNKSLSY--------TTNVLSSLDYHRNLIKKGYQVLIYSGDVDMEIPYVGTETWI----KSLNLTIDSGWQPWLVDGQVAGFWMRYAEKNLYRLTFATVKGAGHTAPEYKPKECLEMINRWFAMYPL 574
            + N + VQ AL  +   V+EW  C+  L Y        T N++ SL      +K G  VL+YSGD D  IP  G+ T +    K L L     ++ W    QV G+   Y       L+FATV+GA H  P  +P+  L +   +   +PL
Sbjct:  317 YLNRRDVQEALHARLIGVREWTVCSNVLDYQLLDVEIPTINIVGSL------VKAGVPVLVYSGDQDSVIPLTGSRTLVSRLAKQLGLRTSVPYRVWFAGQQVGGWTQVYGNV----LSFATVRGASHEVPFSQPERSLVLFKAFLDGHPL 457          
The following BLAST results are available for this feature:
BLAST of CF836278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
PPGB_HUMAN2.210e-1434.64Lysosomal protective protein OS=Homo sapiens GN=CT... [more]
SCP26_ARATH6.431e-1430.82Serine carboxypeptidase-like 26 OS=Arabidopsis tha... [more]
SCP22_ARATH1.433e-1332.64Serine carboxypeptidase-like 22 OS=Arabidopsis tha... [more]
NF314_NAEFO2.444e-1334.85Virulence-related protein Nf314 OS=Naegleria fowle... [more]
CBP2_HORVU1.584e-1229.05Serine carboxypeptidase 2 OS=Hordeum vulgare GN=CB... [more]
CBP21_HORVU2.069e-1229.45Serine carboxypeptidase II-1 (Fragment) OS=Hordeum... [more]
SCP35_ARATH2.702e-1229.87Serine carboxypeptidase-like 35 OS=Arabidopsis tha... [more]
CBPY_PICPG7.861e-1234.44Carboxypeptidase Y OS=Pichia pastoris (strain GS11... [more]
CBP2_WHEAT7.861e-1228.57Serine carboxypeptidase 2 OS=Triticum aestivum GN=... [more]
SCP45_ARATH1.027e-1132.45Serine carboxypeptidase-like 45 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02L10_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02L10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836278 ID=CF836278; Name=CF836278; organism=Citrus sinensis; type=EST; length=715bp
TTTTTTTTTTTTTTAATACATTAATTTAATATTATATAAAATCCATATAG
TACAGAATAGCGCTAAACACTGTATAAAATTATTCTAATATAATATTAAT
ACAATACAACATAATCCAATACATTTGGATATTCTCAAAGTACTGAACAT
GGCTTCAGAGAGGATACATGGCAAACCACCTGTTAATCATTTCGAGGCAT
TCCTTAGGCTTGTACTCTGGAGCTGTATGACCTGCTCCCTTTACTGTGGC
AAATGTCAAACGGTAAAGGTTCTTTTCAGCATACCGCATCCAAAATCCTG
CAACTTGGCCGTCCACAAGCCATGGCTGCCAGCCACTATCAATCGTCAAA
TTTAATGACTTAATCCATGTTTCTGTGCCTACATATGGAATTTCCATGTC
CACATCGCCACTGTAAATCAAAACTTGGTAGCCCTTCTTGATGAGGTTGC
GATGATAATCAAGACTACTAAGGACATTTGTTGTGTAAGATAAACTCTTA
TTGCATCTCCTCCATTCTTTTACCATCCCCTCCTGAATTCCAAGAGCCCT
TTGGACAGATTTGTCATTTGCCCATGTTGGAGCGTATAAATAGTTTTGAT
GCCGACACCAAAGTTTTGGAGCTGGCTGAGCTGGCAAAAAGAGCAAATCT
AAATAATCTTCTTCATCTTCCACGACGCTACCATCTCGGGGGCTCAATCG
TGTTGGTTTTGGGGA
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