CF836286

Overview
NameCF836286
Unique NameCF836286
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length711
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF836286 vs. ExPASy Swiss-Prot
Match: ERF26_ARATH (Ethylene-responsive transcription factor ERF026 OS=Arabidopsis thaliana GN=ERF026 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.963e-11
Identity = 33/65 (50.77%), Postives = 45/65 (69.23%), Query Frame = 1 
Query:   22 KRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDKEARKIRGKKAKVNFPN 216
            +R++  +YRGIR R  GKW +EIR+P+K  RVWLGT+ T E AA AYD  A  ++G    +NFP+
Sbjct:   83 RRKKNPVYRGIRCRS-GKWVSEIREPKKTTRVWLGTYPTPEMAAAAYDVAALALKGGDTLLNFPD 146
[Close]
BLAST of CF836286 vs. ExPASy Swiss-Prot
Match: ERF14_ARATH (Ethylene-responsive transcription factor ERF014 OS=Arabidopsis thaliana GN=ERF014 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.963e-11
Identity = 30/62 (48.39%), Postives = 41/62 (66.13%), Query Frame = 1 
Query:   31 RKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDKEARKIRGKKA-KVNFP 213
            R   Y+G+R R WG W +EIR P +  R+WLG+++TAE AARAYD     ++G  A  +NFP
Sbjct:   31 RMKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGSSANNLNFP 92
[Close]
BLAST of CF836286 vs. ExPASy Swiss-Prot
Match: EF122_ARATH (Ethylene-responsive transcription factor ERF122 OS=Arabidopsis thaliana GN=ERF122 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.054e-11
Identity = 32/62 (51.61%), Postives = 45/62 (72.58%), Query Frame = 1 
Query:   22 KRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDKEARKIRGKKAKVN 207
            K+++K  Y+G+R++P GKWAAEI DPR   R WLGTF TAE AA++Y+  A + R ++ K N
Sbjct:  116 KKEKK--YKGVRKKPSGKWAAEIWDPRSKSRRWLGTFLTAEMAAQSYNDAAAEYRARRGKTN 175
The following BLAST results are available for this feature:
BLAST of CF836286 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
ERF26_ARATH2.963e-1150.77Ethylene-responsive transcription factor ERF026 OS... [more]
ERF14_ARATH2.963e-1148.39Ethylene-responsive transcription factor ERF014 OS... [more]
EF122_ARATH5.054e-1151.61Ethylene-responsive transcription factor ERF122 OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02L15_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02L15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836286 ID=CF836286; Name=CF836286; organism=Citrus sinensis; type=EST; length=711bp
TTCAGGTGATCAATAAAGCCCAAGAGGCAGAGGAAGAATCTCTACAGGGG
AATAAGGCAACGCCCCTGGGGCAAATGGGCAGCTGAGATTCGTGACCCAA
GGAAAGGAGTTCGAGTCTGGCTCGGCACATTCAACACTGCCGAAGAAGCA
GCTCGAGCCTATGACAAAGAAGCCCGCAAGATTCGCGGCAAGAAAGCCAA
AGTCAACTTCCCCAACGAAGAGGACGTCTTCACCGTCACCCCTGCTGCTG
CCGCCCATGCTTACCATCATCATCAGCATAATCATAATCCCACTCCCAGT
CCCCTTCCTTCTCTTTCCCAAGAAGATCTTTTTAGTCGTAATAACTCATC
TATAAGTAGTGTTGGTTTTGGCTTGTATGGTTATGATCTGAACCCCCAGA
TTGTTACTTCTGGTGGTGACGAGAATTCCGGGACTGGTTCTGGTTCTGTT
TCAGAAGGTGGGTACGATTCCACAGAACTTATGCTGAATTGCAACCAGAA
TGTCAATGATGGTTCGTTTGCTCAAATGAAGGTGAAAGCCGAAGAACAAG
AAAAAGAAGAAAAGCGAAAAGCTGAAGAGGAAGAGAACGAAGTGCGAAAG
CTGTCTGAGGAGCTTATGGCGTACGAGAATTTCATGAAGTTCTATCAGCT
TCCGTATCTCGATGGGCAATCACCAGTGTCTAATAATAATAATAATAATA
TTAATATTAAT
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