CF836289

Overview
NameCF836289
Unique NameCF836289
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836289 vs. ExPASy Swiss-Prot
Match: MAS5_YEAST (Mitochondrial protein import protein MAS5 OS=Saccharomyces cerevisiae GN=YDJ1 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.167e-13
Identity = 44/119 (36.97%), Postives = 63/119 (52.94%), Query Frame = -1
Query:  367 QKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSVQL-TDMELDEC 714
            ++ H  FKR GDDL  E  + L  A+ G +F + H+ G  L +   PGEV+ P   K I  +GMP+  +    G L I F++ FPE+   S +  K LE +LPPR    +     +DEC
Sbjct:  253 ERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPI-PKYGGYGNLIIKFTIKFPENHFTSEENLKKLEEILPPRIVPAIPKKATVDEC 370          
BLAST of CF836289 vs. ExPASy Swiss-Prot
Match: DNJB4_PONAB (DnaJ homolog subfamily B member 4 OS=Pongo abelii GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.597e-12
Identity = 39/102 (38.24%), Postives = 55/102 (53.92%), Query Frame = -1
Query:  412 QQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLP 717
            + K+HPKFKR G ++     +SL EALCG    +  LDGR   I     ++VKP   + I   G+P  + P  RG L I F V FP+++S    ++L   LP
Sbjct:  236 KDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRN--IPMSVNDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLP 335          
BLAST of CF836289 vs. ExPASy Swiss-Prot
Match: DNJB4_HUMAN (DnaJ homolog subfamily B member 4 OS=Homo sapiens GN=DNAJB4 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.597e-12
Identity = 39/102 (38.24%), Postives = 55/102 (53.92%), Query Frame = -1
Query:  412 QQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLP 717
            + K+HPKFKR G ++     +SL EALCG    +  LDGR   I     ++VKP   + I   G+P  + P  RG L I F V FP+++S    ++L   LP
Sbjct:  236 KDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRN--IPMSVNDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLP 335          
BLAST of CF836289 vs. ExPASy Swiss-Prot
Match: DNJ20_CAEEL (DnaJ homolog dnj-20 OS=Caenorhabditis elegans GN=dnj-20 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.597e-12
Identity = 41/104 (39.42%), Postives = 61/104 (58.65%), Query Frame = -1
Query:  403 KEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES-LSPDQCKMLETVLPPRT 711
            ++HP+F+RKGDDL+   T+SL +AL GF+  I HLDG   ++K Q  +V  P       DEGMP  +    +G L + F V+FP++ LS +Q   +  +L   T
Sbjct:  245 QKHPRFERKGDDLYTNVTISLQDALNGFEMEIQHLDGH--IVKVQRDKVTWPGARLRKKDEGMPSLEDNNKKGMLVVTFDVEFPKTELSDEQKAQIIEILQQNT 346          
BLAST of CF836289 vs. ExPASy Swiss-Prot
Match: SIS1_YEAST (Protein SIS1 OS=Saccharomyces cerevisiae GN=SIS1 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.724e-12
Identity = 41/99 (41.41%), Postives = 55/99 (55.56%), Query Frame = -1
Query:  424 QQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQL-LIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLE 717
            Q+K HP FKR GDDL     LS  E+L GF   I  +DGR L L + QP   V+P Q      +GMP  + P  RG L + + VD+P SL+  Q + ++
Sbjct:  254 QEKSHPNFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQP---VQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQKRAID 349          
BLAST of CF836289 vs. ExPASy Swiss-Prot
Match: DNJB4_BOVIN (DnaJ homolog subfamily B member 4 OS=Bos taurus GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.068e-12
Identity = 38/102 (37.25%), Postives = 55/102 (53.92%), Query Frame = -1
Query:  412 QQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLP 717
            + K+HPKFKR G ++     +SL EALCG    +  +DGR   I     ++VKP   + I   G+P  + P  RG L I F V FP+++S    ++L   LP
Sbjct:  236 KDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTMDGR--TIPMTINDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLP 335          
BLAST of CF836289 vs. ExPASy Swiss-Prot
Match: DNJB4_MOUSE (DnaJ homolog subfamily B member 4 OS=Mus musculus GN=Dnajb4 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.035e-11
Identity = 38/102 (37.25%), Postives = 55/102 (53.92%), Query Frame = -1
Query:  412 QQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLP 717
            + KEHPKFKR G ++     +SL EALCG    +  +DGR L +     ++VKP   + +   G+P  + P  RG L I F V FP+ +S    ++L   LP
Sbjct:  236 KDKEHPKFKRDGSNIVYTAKISLREALCGCSLNVPTMDGRNLPMSVT--DIVKPGMRRRVIGYGLPFPKNPDQRGDLLIEFDVSFPDVISAASKEILRKHLP 335          
BLAST of CF836289 vs. ExPASy Swiss-Prot
Match: DJB11_PONAB (DnaJ homolog subfamily B member 11 OS=Pongo abelii GN=DNAJB11 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.933e-11
Identity = 34/92 (36.96%), Postives = 54/92 (58.70%), Query Frame = -1
Query:  433 EHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCK 708
            +HP F+R+GDDL+   T+SL E+L GF+  ITHLDG ++ I     ++ +P        EG+P +    ++G L I F VDFP+    ++ +
Sbjct:  247 KHPIFERRGDDLYTNVTISLVESLVGFEMDITHLDGHKVHISRD--KITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAR 336          
BLAST of CF836289 vs. ExPASy Swiss-Prot
Match: DJB11_HUMAN (DnaJ homolog subfamily B member 11 OS=Homo sapiens GN=DNAJB11 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.933e-11
Identity = 34/92 (36.96%), Postives = 54/92 (58.70%), Query Frame = -1
Query:  433 EHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCK 708
            +HP F+R+GDDL+   T+SL E+L GF+  ITHLDG ++ I     ++ +P        EG+P +    ++G L I F VDFP+    ++ +
Sbjct:  247 KHPIFERRGDDLYTNVTISLVESLVGFEMDITHLDGHKVHISRD--KITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAR 336          
BLAST of CF836289 vs. ExPASy Swiss-Prot
Match: XDJ1_SCHPO (DnaJ protein homolog xdj1 OS=Schizosaccharomyces pombe GN=xdj1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.136e-11
Identity = 40/113 (35.40%), Postives = 61/113 (53.98%), Query Frame = -1
Query:  385 QKEHPKFKRKGDDLFVEHTLSLTEALCGF-QFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSVQLTD 714
            QK HP F+R GDDL  +  +SL EAL GF + ++T LDGR L      G+++ P     I  EGM    +  +RG LY+   ++FP+   +   + ++L  +LP    V + D
Sbjct:  259 QKPHPVFERLGDDLKAKLKISLAEALTGFNRVILTTLDGRGLEYVQPIGKILHPGDCLIIPGEGMYKDSKTDLRGDLYLEVDIEFPKDGLIGTTEIEILRDILPSIPKVSVMD 371          
The following BLAST results are available for this feature:
BLAST of CF836289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
MAS5_YEAST7.167e-1336.97Mitochondrial protein import protein MAS5 OS=Sacch... [more]
DNJB4_PONAB1.597e-1238.24DnaJ homolog subfamily B member 4 OS=Pongo abelii ... [more]
DNJB4_HUMAN1.597e-1238.24DnaJ homolog subfamily B member 4 OS=Homo sapiens ... [more]
DNJ20_CAEEL1.597e-1239.42DnaJ homolog dnj-20 OS=Caenorhabditis elegans GN=d... [more]
SIS1_YEAST2.724e-1241.41Protein SIS1 OS=Saccharomyces cerevisiae GN=SIS1 P... [more]
DNJB4_BOVIN6.068e-1237.25DnaJ homolog subfamily B member 4 OS=Bos taurus GN... [more]
DNJB4_MOUSE1.035e-1137.25DnaJ homolog subfamily B member 4 OS=Mus musculus ... [more]
DJB11_PONAB3.933e-1136.96DnaJ homolog subfamily B member 11 OS=Pongo abelii... [more]
DJB11_HUMAN3.933e-1136.96DnaJ homolog subfamily B member 11 OS=Homo sapiens... [more]
XDJ1_SCHPO5.136e-1135.40DnaJ protein homolog xdj1 OS=Schizosaccharomyces p... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02L18_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02L18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836289 ID=CF836289; Name=CF836289; organism=Citrus sinensis; type=EST; length=717bp
TTTTTTTTTTTTTTTTTATTGTAACACTAAAAATATTAATTATGAGCATT
GAGTCTGAAGGTGCAAACGCTAGAATTCCATTACATAGTCAGTTATCAGA
AAAACATAAGAATAAAGACAGACAAACCAAAACTAGAACCTCTAAAGCCT
ATAACAGAAAATAAATATGTTGAGAATCTTTTTCTCCCAAACAATGAAAA
TACTAAATCAGGCCACCCCTTTTCTTCTACATCATCACTGCTGAGCACAC
TGCACTCTCTGGGCACCACCTTGCATATCGTCATCTTCATCGTATGCCTC
CTGAGCTGCTTGTTGCTTCCTTCGCATTTCCTCCTCAATGTTCACATCAT
GCAGGGTTGTTTCTTCACACTCATCCAGTTCCATATCGGTGAGCTGGACT
GAGGTCCTTGGAGGTAGTACGGTCTCCAGCATCTTGCACTGGTCTGGGCT
CAGTGACTCAGGGAAGTCAACACTGAAATGAATGTACAGTTTGCCCCTCA
TAAATGGCCTCTGATACATAGGCATTCCTTCATCATTTATGGCCTTGAAT
TGGTCCGGCTTGACTACTTCCCCAGGCTGGGATTTGATGAGGAGTTGCCG
GCCATCCAAATGAGTTATTACAAATTGAAAGCCACAGAGAGCTTCTGTCA
GTGACAGGGTGTGCTCAACAAATAGGTCATCACCCTTTCGCTTAAATTTC
GGGTGCTCTTTCTGTTG
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