CF836289

Overview
NameCF836289
Unique NameCF836289
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836289 vs. ExPASy Swiss-Prot
Match: DNJB5_MOUSE (DnaJ homolog subfamily B member 5 OS=Mus musculus GN=Dnajb5 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.708e-11
Identity = 37/102 (36.27%), Postives = 55/102 (53.92%), Query Frame = -1
Query:  412 QQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLP 717
            + K H  F+R G ++     +SL EALCG    I  +DGR  +I     +V+KP   K +  EG+P  + P  RG L + F V FP+ L+P   ++L+  LP
Sbjct:  247 KDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGR--VIPLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHLP 346          
BLAST of CF836289 vs. ExPASy Swiss-Prot
Match: DNJB5_HUMAN (DnaJ homolog subfamily B member 5 OS=Homo sapiens GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.708e-11
Identity = 37/102 (36.27%), Postives = 55/102 (53.92%), Query Frame = -1
Query:  412 QQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLP 717
            + K H  F+R G ++     +SL EALCG    I  +DGR  +I     +V+KP   K +  EG+P  + P  RG L + F V FP+ L+P   ++L+  LP
Sbjct:  247 KDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGR--VIPLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHLP 346          
BLAST of CF836289 vs. ExPASy Swiss-Prot
Match: DNJB5_BOVIN (DnaJ homolog subfamily B member 5 OS=Bos taurus GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.708e-11
Identity = 37/102 (36.27%), Postives = 55/102 (53.92%), Query Frame = -1
Query:  412 QQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLP 717
            + K H  F+R G ++     +SL EALCG    I  +DGR  +I     +V+KP   K +  EG+P  + P  RG L + F V FP+ L+P   ++L+  LP
Sbjct:  247 KDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGR--VIPLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHLP 346          
BLAST of CF836289 vs. ExPASy Swiss-Prot
Match: DNJB1_MOUSE (DnaJ homolog subfamily B member 1 OS=Mus musculus GN=Dnajb1 PE=2 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 6.708e-11
Identity = 38/102 (37.25%), Postives = 55/102 (53.92%), Query Frame = -1
Query:  412 QQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLP 717
            + K H  FKR G D+     +SL EALCG    +  LDGR + +  +  +V++P   + +  EG+P+ + P  RG L I F V FPE +      +LE VLP
Sbjct:  240 KDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFK--DVIRPGMRRKVPGEGLPLPKTPEKRGDLVIEFEVIFPERIPVSSRTILEQVLP 339          
BLAST of CF836289 vs. ExPASy Swiss-Prot
Match: DNJB1_HUMAN (DnaJ homolog subfamily B member 1 OS=Homo sapiens GN=DNAJB1 PE=1 SV=4)

HSP 1 Score: 67.781 bits (164), Expect = 6.708e-11
Identity = 38/102 (37.25%), Postives = 55/102 (53.92%), Query Frame = -1
Query:  412 QQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLP 717
            + K H  FKR G D+     +SL EALCG    +  LDGR + +  +  +V++P   + +  EG+P+ + P  RG L I F V FPE +      +LE VLP
Sbjct:  240 KDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFK--DVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLP 339          
BLAST of CF836289 vs. ExPASy Swiss-Prot
Match: DNJB1_BOVIN (DnaJ homolog subfamily B member 1 OS=Bos taurus GN=DNAJB1 PE=2 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 6.708e-11
Identity = 38/102 (37.25%), Postives = 55/102 (53.92%), Query Frame = -1
Query:  412 QQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLP 717
            + K H  FKR G D+     +SL EALCG    +  LDGR + +  +  +V++P   + +  EG+P+ + P  RG L I F V FPE +      +LE VLP
Sbjct:  240 KDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFK--DVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLP 339          
BLAST of CF836289 vs. ExPASy Swiss-Prot
Match: DJB11_CANFA (DnaJ homolog subfamily B member 11 OS=Canis familiaris GN=DNAJB11 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.708e-11
Identity = 34/92 (36.96%), Postives = 53/92 (57.61%), Query Frame = -1
Query:  433 EHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCK 708
            +HP F+R+GDDL+   T+SL E+L GF   ITHLDG ++ I     ++ +P        EG+P +    ++G L I F VDFP+    ++ +
Sbjct:  247 KHPIFERRGDDLYTNVTISLVESLVGFDMDITHLDGHKVHISRD--KITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAR 336          
BLAST of CF836289 vs. ExPASy Swiss-Prot
Match: DJB13_MOUSE (DnaJ homolog subfamily B member 13 OS=Mus musculus GN=Dnajb13 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.761e-11
Identity = 36/101 (35.64%), Postives = 57/101 (56.44%), Query Frame = -1
Query:  415 QQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVL 717
            ++K HP+F+R+ D+LF  + + L +AL      +  LD R L I     ++V P  FK +  EGMP+ + P  +G L+I F + FP  L+P + +ML   L
Sbjct:  216 KEKLHPRFRREHDNLFFVYPIPLGKALTCCTVEVKTLDDRLLNIPIN--DIVHPKYFKIVPGEGMPLPENPSKKGDLFIFFDIQFPTRLTPQKKQMLRQAL 314          
The following BLAST results are available for this feature:
BLAST of CF836289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
DNJB5_MOUSE6.708e-1136.27DnaJ homolog subfamily B member 5 OS=Mus musculus ... [more]
DNJB5_HUMAN6.708e-1136.27DnaJ homolog subfamily B member 5 OS=Homo sapiens ... [more]
DNJB5_BOVIN6.708e-1136.27DnaJ homolog subfamily B member 5 OS=Bos taurus GN... [more]
DNJB1_MOUSE6.708e-1137.25DnaJ homolog subfamily B member 1 OS=Mus musculus ... [more]
DNJB1_HUMAN6.708e-1137.25DnaJ homolog subfamily B member 1 OS=Homo sapiens ... [more]
DNJB1_BOVIN6.708e-1137.25DnaJ homolog subfamily B member 1 OS=Bos taurus GN... [more]
DJB11_CANFA6.708e-1136.96DnaJ homolog subfamily B member 11 OS=Canis famili... [more]
DJB13_MOUSE8.761e-1135.64DnaJ homolog subfamily B member 13 OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02L18_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02L18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836289 ID=CF836289; Name=CF836289; organism=Citrus sinensis; type=EST; length=717bp
TTTTTTTTTTTTTTTTTATTGTAACACTAAAAATATTAATTATGAGCATT
GAGTCTGAAGGTGCAAACGCTAGAATTCCATTACATAGTCAGTTATCAGA
AAAACATAAGAATAAAGACAGACAAACCAAAACTAGAACCTCTAAAGCCT
ATAACAGAAAATAAATATGTTGAGAATCTTTTTCTCCCAAACAATGAAAA
TACTAAATCAGGCCACCCCTTTTCTTCTACATCATCACTGCTGAGCACAC
TGCACTCTCTGGGCACCACCTTGCATATCGTCATCTTCATCGTATGCCTC
CTGAGCTGCTTGTTGCTTCCTTCGCATTTCCTCCTCAATGTTCACATCAT
GCAGGGTTGTTTCTTCACACTCATCCAGTTCCATATCGGTGAGCTGGACT
GAGGTCCTTGGAGGTAGTACGGTCTCCAGCATCTTGCACTGGTCTGGGCT
CAGTGACTCAGGGAAGTCAACACTGAAATGAATGTACAGTTTGCCCCTCA
TAAATGGCCTCTGATACATAGGCATTCCTTCATCATTTATGGCCTTGAAT
TGGTCCGGCTTGACTACTTCCCCAGGCTGGGATTTGATGAGGAGTTGCCG
GCCATCCAAATGAGTTATTACAAATTGAAAGCCACAGAGAGCTTCTGTCA
GTGACAGGGTGTGCTCAACAAATAGGTCATCACCCTTTCGCTTAAATTTC
GGGTGCTCTTTCTGTTG
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