CF836291

Overview
NameCF836291
Unique NameCF836291
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length755
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1875 contig Csv1_Contig1875:172..926. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF836291 vs. ExPASy Swiss-Prot
Match: PRR2_TOBAC (Pathogenesis-related protein R minor form OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 2.838e-71
Identity = 121/189 (64.02%), Postives = 144/189 (76.19%), Query Frame = -2
Query:  194 AAAVPGGGRQLDKGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNS--GNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVFCP 754
            AAA PGGGRQL+ GQ+W+I   PGT  ARIW RT C FD SG+G CETGDCNG+LECQGYG  PNTLAE+AL Q N  DF+D+S +DGFN+PMEFS  +  C R ++CTA I  +CP +LK  GGCN PC V KT+E+CC +  G+CGPT  S+FFK RCPD YSYP+DD  S FTCP GT+Y+VVFCP
Sbjct:   40 AAASPGGGRQLNSGQSWSINVNPGTVQARIWGRTNCNFDGSGRGNCETGDCNGMLECQGYGKPPNTLAEFALNQPN-QDFVDISLVDGFNIPMEFSPTNGGC-RNLRCTAPINEQCPAQLKTQGGCNNPCTVIKTNEFCCTNGPGSCGPTDLSRFFKARCPDAYSYPQDDPPSLFTCPPGTNYRVVFCP 226          
BLAST of CF836291 vs. ExPASy Swiss-Prot
Match: NP24_SOLLC (Protein NP24 OS=Solanum lycopersicum PE=1 SV=2)

HSP 1 Score: 267.314 bits (682), Expect = 6.323e-71
Identity = 121/191 (63.35%), Postives = 144/191 (75.39%), Query Frame = -2
Query:  194 AAAVP-GGGRQLDKGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNR--VIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSG-TDYKVVFCP 754
            AA+ P GGGR+L++GQTW I A  GTK ARIW RT C F+A+G+G C+TGDC G+L+C G+G  PNTLAEYAL QF+++DF D+S +DGFN+PM F+   PS  +   I CTANI GECP  LKVPGGCN PC  F   +YCC  G CGPT  SKFFK RCPD YSYP+DD TSTFTCP G T+Y+VVFCP
Sbjct:   36 AASTPIGGGRRLNRGQTWVINAPRGTKMARIWGRTGCNFNAAGRGTCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTKPSGGKCHAIHCTANINGECPRALKVPGGCNNPCTTFGGQQYCCTQGPCGPTELSKFFKKRCPDAYSYPQDDPTSTFTCPGGSTNYRVVFCP 226          
BLAST of CF836291 vs. ExPASy Swiss-Prot
Match: OS35_SOLCO (Osmotin-like protein OSML15 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 5.352e-70
Identity = 119/191 (62.30%), Postives = 142/191 (74.35%), Query Frame = -2
Query:  194 AAAVP-GGGRQLDKGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRV--IKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPS-GTDYKVVFCP 754
            AAA P GGGR+L++GQ+W   A PGTK ARIW RT C FD +G+G C+TGDC G+LEC+G+G  PNTLAEYAL QF+++DF D+S IDGFN+PM F   +P   +   I+C ANI GECP  L+VPGGCN PC  F   +YCC  G CGPT  S+FFK RCPD YSYP+DD TSTFTC S  TDYKV+FCP
Sbjct:   37 AAATPIGGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCGGVLECKGWGKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTNPGPGKCHPIQCVANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCQSWTTDYKVMFCP 227          
BLAST of CF836291 vs. ExPASy Swiss-Prot
Match: OLPA_TOBAC (Osmotin-like protein OS=Nicotiana tabacum GN=OLPA PE=1 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 9.130e-70
Identity = 119/191 (62.30%), Postives = 142/191 (74.35%), Query Frame = -2
Query:  194 AAAVP-GGGRQLDKGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRV--IKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPS-GTDYKVVFCP 754
            AAA P GGGR+L++GQ+W   A PGTK ARIW RT C FD +G+G C+TGDC G+LEC+G+G  PNTLAEYAL QF+++DF D+S IDGFN+PM F    P   +   I+CTANI GECP  L+VPGGCN PC  F   +YCC  G CGPT  S++FK RCPD YSYP+DD TSTFTC S  TDYKV+FCP
Sbjct:   37 AAATPVGGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCGGVLECKGWGKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFCP 227          
BLAST of CF836291 vs. ExPASy Swiss-Prot
Match: THM2_THADA (Thaumatin-2 OS=Thaumatococcus daniellii PE=2 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 1.012e-60
Identity = 105/187 (56.15%), Postives = 135/187 (72.19%), Query Frame = -2
Query:  194 AAVPGGGRQLDKGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVP-GGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVFCP 751
            AA+  GGRQL+ G++WTI   PGTK  +IWART C FD SG+G C TGDC GLL+C+ +G  P TLAE++L Q+   D+ID+SNI GFNVPM+FS  +  C R ++C A+I+G+CP +LK P GGCN  C VF+T EYCC +G CGPT +S+FFK  CPD +SY  D  T T TCP  ++Y+V FCP
Sbjct:   44 AALDAGGRQLNSGESWTINVEPGTKGGKIWARTDCYFDDSGRGICRTGDCGGLLQCKRFGRPPTTLAEFSLNQYG-KDYIDISNIKGFNVPMDFSPTTRGC-RGVRCAADIVGQCPAKLKAPGGGCNDACTVFQTSEYCCTTGKCGPTEYSRFFKRLCPDAFSYVLDKPT-TVTCPGSSNYRVTFCP 227          
BLAST of CF836291 vs. ExPASy Swiss-Prot
Match: THM1_THADA (Thaumatin-1 OS=Thaumatococcus daniellii PE=1 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.461e-59
Identity = 104/187 (55.61%), Postives = 132/187 (70.59%), Query Frame = -2
Query:  194 AAVPGGGRQLDKGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVP-GGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVFCP 751
            AA+  GGRQL+ G++WTI   PGT   +IWART C FD SG G C+TGDC GLL C+ +G  P TLAE++L Q+   D+ID+SNI GFNVPM FS  +  C R ++C A+I+G+CP +LK P GGCN  C VF+T EYCC +G CGPT +S+FFK  CPD +SY  D  T T TCP  ++Y+V FCP
Sbjct:   22 AALDAGGRQLNSGESWTINVEPGTNGGKIWARTDCYFDDSGSGICKTGDCGGLLRCKRFGRPPTTLAEFSLNQYG-KDYIDISNIKGFNVPMNFSPTTRGC-RGVRCAADIVGQCPAKLKAPGGGCNDACTVFQTSEYCCTTGKCGPTEYSRFFKRLCPDAFSYVLDKPT-TVTCPGSSNYRVTFCP 205          
BLAST of CF836291 vs. ExPASy Swiss-Prot
Match: PRR3_JUNAS (Pathogenesis-related protein OS=Juniperus ashei PE=1 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.237e-58
Identity = 105/190 (55.26%), Postives = 129/190 (67.89%), Query Frame = -2
Query:  194 AAAVPGGGRQLDKGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSG---NCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVFCP 754
            AA +PGGG++LD+GQTWT+  A GT +AR W RT C FDASGKG C+TGDC G L C   GA P TLAEY     +D D+ D+S +DGFN+P+  +  +  C     C A+I   CP+ELKV GGCN  C VFKTD+YCC +    NC  T +SK FK++CP  YSY KDD T+TF C SGTDY +VFCP
Sbjct:   41 AAGLPGGGKRLDQGQTWTVNLAAGTASARFWGRTGCTFDASGKGSCQTGDCGGQLSCTVSGAVPATLAEYTQ---SDQDYYDVSLVDGFNIPLAINPTNAQCT-APACKADINAVCPSELKVDGGCNSACNVFKTDQYCCRNAYVDNCPATNYSKIFKNQCPQAYSYAKDD-TATFACASGTDYSIVFCP 225          
BLAST of CF836291 vs. ExPASy Swiss-Prot
Match: PR5_ARATH (Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.425e-38
Identity = 86/193 (44.56%), Postives = 109/193 (56.48%), Query Frame = -2
Query:  194 GGRQLDKGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEF--SSVSPSCNRVIKCTANILGECPNELKVPG-----GCNGPCPVFKTDEYCCNSGN-----CGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVFCP 736
            GG +L  G +  +TA  G  + R WART C FDASG G+C TGDC G L C G G  P TLAE+ L      DF D+S +DG+NV +    S  S  C +   C +++   CP+ LKV        C   C  F TD+YCC   N     C PT +S+ FK+ CPD YSY  DD TSTFTC +G +Y++ FCP
Sbjct:   51 GGFELTPGASRQLTAPAGW-SGRFWARTGCNFDASGNGRCVTGDCGG-LRCNGGGVPPVTLAEFTLVGDGGKDFYDVSLVDGYNVKLGIRPSGGSGDC-KYAGCVSDLNAACPDMLKVMDQNNVVACKSACERFNTDQYCCRGANDKPETCPPTDYSRIFKNACPDAYSYAYDDETSTFTC-TGANYEITFCP 239          
BLAST of CF836291 vs. ExPASy Swiss-Prot
Match: TLP1_PYRPY (Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 8.073e-34
Identity = 81/196 (41.33%), Postives = 105/196 (53.57%), Query Frame = -2
Query:  194 GRQLDKGQTWTITA-APGTKAARIWARTKCQFDASGKGKCETGDC-NGLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFNVPMEFS--SVSPSCNRVIKCTANILGECPNELKVPG------GCNGPCPVFKTDEYCCNSG-----NCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVFCP 733
            G +L  G + ++T  AP +   R W R+ C  D+SGK KC TGDC +G + C G GA+P  +L E  L      DF D+S +DGFN+P++ +    S  CN    C ANI   CP EL   G      GC   C      +YCC         C PT FSK FK++CP  YSY  DD +STFTC  G +Y++ FCP
Sbjct:   52 GFELASGASTSLTVQAPWS--GRFWGRSHCSIDSSGKFKCSTGDCGSGQISCNGAGASPPASLVELTLATNGGQDFYDVSLVDGFNLPIKLAPRGGSGDCNST-SCAANINTVCPAELSDKGSDGSVIGCKSACLALNQPQYCCTGAYGTPDTCPPTDFSKVFKNQCPQAYSYAYDDKSSTFTCFGGPNYEITFCP 244          
BLAST of CF836291 vs. ExPASy Swiss-Prot
Match: TP1B_MALDO (Thaumatin-like protein 1b (Fragment) OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.785e-32
Identity = 74/183 (40.44%), Postives = 95/183 (51.91%), Query Frame = -2
Query:  194 APGTKAARIWARTKCQFDASGKGKCETGDC-NGLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN----RVIKCTANILGECPNELKVPGG------CNGPCPVFKTDEYCCNSGN-----CGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVFCP 691
            AP   + R W RT+C  DA+GK  CET DC +G + C G GA P  TL E  +      D+ D+S +DGFN+PM   SV+P       +   C AN+   CP +L+V         C   C  F   +YCC   N     C PT +S+ F+ +CP  YSY  DD  STFTC  G DY + FCP
Sbjct:   33 APSPWSGRFWGRTRCSTDAAGKFSCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPM---SVAPQGGTGECKPSSCPANVNMACPAQLQVKAADGSVISCKSACLAFGDSKYCCTPPNDTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFCP 212          
The following BLAST results are available for this feature:
BLAST of CF836291 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
PRR2_TOBAC2.838e-7164.02Pathogenesis-related protein R minor form OS=Nicot... [more]
NP24_SOLLC6.323e-7163.35Protein NP24 OS=Solanum lycopersicum PE=1 SV=2[more]
OS35_SOLCO5.352e-7062.30Osmotin-like protein OSML15 OS=Solanum commersonii... [more]
OLPA_TOBAC9.130e-7062.30Osmotin-like protein OS=Nicotiana tabacum GN=OLPA ... [more]
THM2_THADA1.012e-6056.15Thaumatin-2 OS=Thaumatococcus daniellii PE=2 SV=1[more]
THM1_THADA1.461e-5955.61Thaumatin-1 OS=Thaumatococcus daniellii PE=1 SV=1[more]
PRR3_JUNAS1.237e-5855.26Pathogenesis-related protein OS=Juniperus ashei PE... [more]
PR5_ARATH2.425e-3844.56Pathogenesis-related protein 5 OS=Arabidopsis thal... [more]
TLP1_PYRPY8.073e-3441.33Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1... [more]
TP1B_MALDO5.785e-3240.44Thaumatin-like protein 1b (Fragment) OS=Malus dome... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02L19_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02L19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836291 ID=CF836291; Name=CF836291; organism=Citrus sinensis; type=EST; length=755bp
TTTTTTTTTTTTTTAAGAAGCCCCATAAAATTTCAGTTATTCTCCTTTTA
ATTCACGCACATAACTACATGTGCCTGCTCCAGCTCTATGGCAGTGAAGA
CCGCACGGTCCTTATTCCAATATTATAACAAATACAGAAGACTACGTCGT
ATAGTTTTCTATTTCCATTTCTACCCCTGAAAAAAATGCTTCAGGGGCAG
AATACAACCTTGTAGTCGGTCCCACTCGGGCAAGTAAATGTGCTGGTAGC
GTCATCCTTAGGGTAACTGTAAACATCCGGGCACCTATCCTTGAAAAACT
TGGAGAAACCTGTAGGTCCGCAGTTGCCTGAATTGCAACAGTACTCGTCG
GTCTTGAACACGGGGCACGGCCCGTTACATCCTCCAGGAACCTTCAATTC
ATTAGGGCACTCGCCAAGAATGTTAGCAGTGCACTTGATCACGCGGTTGC
ATGAGGGAGAGACAGAGCTAAATTCCATGGGAACATTGAATCCGTCAATG
TTGGACATGTCAATGAAATCCATGTCATTGAATTGCTTCAACGCGTACTC
GGCCAAGGTGTTAGGTGCTGCACCGTAGCCTTGGCACTCGAGGAGTCCGT
TACAGTCACCGGTCTCGCATTTGCCTTTGCCGGAAGCATCAAACTGGCAT
TTGGTTCGAGCCCAAATGCGGGCTGCTTTTGTGCCTGGCGCGGCGGTGAT
GGTCCATGTTTGACCCTTGTCGAGTTGCCTGCCGCCTCCGGGCACAGCGG
CGGCC
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