CF836291

Overview
NameCF836291
Unique NameCF836291
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length755
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836291 vs. ExPASy Swiss-Prot
Match: TLP_PRUAV (Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.289e-31
Identity = 75/176 (42.61%), Postives = 93/176 (52.84%), Query Frame = -2
Query:  194 RIWARTKCQFDASGKGKCETGDC-NGLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN----RVIKCTANILGECPNELKVPGG------CNGPCPVFKTDEYCCNSGN-----CGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVFCP 670
            R WART C  DASGK  C T DC +G + C G GA P  TLAE+ +      DF D+S +DGFN+PM   SV+P       +   C AN+   CP+EL+  G       C   C  F T +YCC         C PT +S+ F + CPD YSY  DD   TFTC  G +Y + FCP
Sbjct:   73 RFWARTGCSTDASGKFVCATADCASGQVMCNGNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPM---SVTPQGGTGDCKTASCPANVNAVCPSELQKKGSDGSVVACLSACVKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP 245          
BLAST of CF836291 vs. ExPASy Swiss-Prot
Match: TP1A_MALDO (Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.683e-31
Identity = 74/183 (40.44%), Postives = 94/183 (51.37%), Query Frame = -2
Query:  194 APGTKAARIWARTKCQFDASGKGKCETGDC-NGLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN----RVIKCTANILGECPNELKVPGG------CNGPCPVFKTDEYCCNSGN-----CGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVFCP 691
            AP   + R W RT+C  DA+GK  CET DC +G + C G GA P  TL E  +      D+ D+S +DGFN+PM   SV+P       +   C AN+   CP  L+V         C   C  F   +YCC   N     C PT +S+ F+ +CP  YSY  DD  STFTC  G DY + FCP
Sbjct:   67 APSPWSGRFWGRTRCSTDAAGKFTCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPM---SVAPQGGTGECKPSSCPANVNKVCPAPLQVKAADGSVISCKSACLAFGDSKYCCTPPNNTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFCP 246          
BLAST of CF836291 vs. ExPASy Swiss-Prot
Match: TLP2_PRUPE (Thaumatin-like protein 2 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.396e-31
Identity = 74/178 (41.57%), Postives = 95/178 (53.37%), Query Frame = -2
Query:  194 AARIWARTKCQFDASGKGKCETGDCN-GLLECQGY-GAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN----RVIKCTANILGECPNELKVPGG------CNGPCPVFKTDEYCCN-----SGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVFCP 676
            + R WART+C  DASGK  CET DC+ G L C G  G  P TLAE+ +      DF D+S +DGFN+PM   SV+P       ++  C AN+   CP+EL+  G       C   C  F   +YCC         C PT +S+ F ++CPD YSY  DD    FTC  G +Y + FCP
Sbjct:   68 SGRFWARTRCSTDASGKFVCETADCDSGQLMCNGKTGIPPATLAEFTIAAGGGQDFYDVSLVDGFNLPM---SVTPQGGTGTCKMGSCAANVNLVCPSELQKIGSDGSVVACLSACVKFGEPQYCCTPPQETKEKCPPTNYSQIFHEQCPDAYSYAFDDNKGLFTCSGGPNYLITFCP 242          
BLAST of CF836291 vs. ExPASy Swiss-Prot
Match: TLP1_PRUPE (Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.146e-30
Identity = 75/183 (40.98%), Postives = 93/183 (50.82%), Query Frame = -2
Query:  194 APGTKAARIWARTKCQFDASGKGKCETGDC-NGLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN----RVIKCTANILGECPNELKVPGG------CNGPCPVFKTDEYCCNSGN-----CGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVFCP 691
            AP   + R + RT+C  DASGK  C T DC +G + C G GAAP  TL E  +      DF D+S +DGFN+PM   SV+P       +   C A+I   CP  L+V G       C   C  F   +YCC   N     C P  +SK FK +CP  YSY  DD +STFTC     Y + FCP
Sbjct:   67 APSPWSGRFFGRTRCSTDASGKFTCATADCGSGQVSCNGNGAAPPATLVEITIASNGGQDFYDVSLVDGFNLPM---SVAPQGGTGKCKASTCPADINKVCPAPLQVKGSDGSVIACKSACLAFNQPKYCCTPPNDKPETCPPPDYSKLFKTQCPQAYSYAYDDKSSTFTCSGRPAYLITFCP 246          
BLAST of CF836291 vs. ExPASy Swiss-Prot
Match: TLP1_CASSA (Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.415e-30
Identity = 69/173 (39.88%), Postives = 93/173 (53.76%), Query Frame = -2
Query:  194 RIWARTKCQFDASGKGKCETGDCN-GLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN-RVIKCTANILGECPNELKVPGG------CNGPCPVFKTDEYCCNSG-----NCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVFCP 670
            R WART+C  + SGK  CET DC+ G + C G GA P  +L E  +     MDF D+S +DG+N+P+  ++   + + +   C AN+   CP EL+V G       C   C  F   +YCC         C  T +S+ FK +CP  YSY  DD+TSTFTC    DY + FCP
Sbjct:   72 RFWARTRCTTN-SGKFTCETADCSTGQVACNGNGAIPPASLVEINIAANRGMDFYDVSLVDGYNLPVSVATRGGTGDCKATSCRANVNAVCPAELQVKGSDASVLACKSACTAFNQPQYCCTGAFDTARTCPATKYSRIFKQQCPQAYSYAYDDSTSTFTCSGAPDYVITFCP 243          
BLAST of CF836291 vs. ExPASy Swiss-Prot
Match: TLPH_ARATH (Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 5.987e-29
Identity = 77/197 (39.09%), Postives = 99/197 (50.25%), Query Frame = -2
Query:  194 GGGRQLDKGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGA-APNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSV--SPSCNRVIKCTANILGECPNELKVPG-------GCNGPCPVFKTDEYCC-----NSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVFCP 739
            GGG +L   +  ++   P   + R W R  C FD SG+G C TGDC G L C G G   P TLAE  L    ++DF D+S +DG+N+ M    V  S  C+    C +++   CP  L+V          C   C  F + +YCC     N  +C PT +SK FK  CP  YSY  DD TS  TC S  +Y V FCP
Sbjct:   48 GGGFKLPANKAHSLQLPP-LWSGRFWGRHGCTFDRSGRGHCATGDCGGSLSCNGAGGEPPATLAEITLGP--ELDFYDVSLVDGYNLAMSIMPVKGSGQCS-YAGCVSDLNQMCPVGLQVRSRNGKRVVACKSACSAFNSPQYCCTGLFGNPQSCKPTAYSKIFKVACPKAYSYAYDDPTSIATC-SKANYIVTFCP 239          
BLAST of CF836291 vs. ExPASy Swiss-Prot
Match: OLP1_SOLLC (Osmotin-like protein OS=Solanum lycopersicum PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.285e-27
Identity = 68/179 (37.99%), Postives = 95/179 (53.07%), Query Frame = -2
Query:  197 AARIWARTKCQFDASGKGKCETGDCNGLLECQGYG-AAPNTLAEYALKQFN-DMDFIDMSNIDGFNVPMEFSSVSPSCNR----VIKCTANILGECPNELKVPG--------GCNGPCPVFKTDEYCCNSG-----NCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVFC 676
            + RIWART C +   GK  C TGDC G +EC G G AAP TLA++ L   + D     +S +DGFN+P+   +V+P   +    V+ C AN+L  CP  L+           GC   C  FK+DE+CC +       C P+ +S+FFK  CP  ++Y  D  +    C S  + KV+FC
Sbjct:   77 SGRIWARTGCNYQ-HGKFYCATGDCGGRIECDGLGGAAPATLAQFVLHHGHADFSTYGVSLVDGFNIPL---TVTPHEGKGVCPVVGCRANLLESCPAVLQFRSHGGHGPVVGCKSACEAFKSDEFCCRNHYNSPQTCKPSSYSQFFKHACPATFTYAHDSPSLMHECSSPRELKVIFC 251          
BLAST of CF836291 vs. ExPASy Swiss-Prot
Match: TLP_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os12g0628600 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.604e-27
Identity = 69/187 (36.90%), Postives = 86/187 (45.99%), Query Frame = -2
Query:  194 AAAVPGGGRQLDKGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVFCP 754
            AA   GGG QL  GQTWTI    GT + R+W RT C FD SG+G C TGDC G L C   G  P TLAE+ +      DF D+S IDG+NV M FS           C++ +   C +                                      RCPD Y +P+D+ T T  C   ++Y+VVFCP
Sbjct:   42 AATPVGGGVQLSPGQTWTINVPAGTSSGRVWGRTGCSFDGSGRGSCATGDCAGALSCTLSGQKPLTLAEFTIG--GSQDFYDLSVIDGYNVAMSFS-----------CSSGVTVTCRD-------------------------------------SRCPDAYLFPEDN-TKTHACSGNSNYQVVFCP 177          
BLAST of CF836291 vs. ExPASy Swiss-Prot
Match: TLPH_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.604e-27
Identity = 73/195 (37.44%), Postives = 93/195 (47.69%), Query Frame = -2
Query:  194 GGRQLDKGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQG-YGAAPNTLAEYAL-KQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN-RVIKCTANILGECPNELKV------PGGCNGPCPVFKTDEYCC-----NSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVFCP 736
            GG  L  G+   +    G  + R+W R  C FD+ G+G C TGDC G+L C G  GA P T+ E  L    + M F D+S +DGFN P+  ++V          C A++   CP+ L+V        GC   C     D YCC     +   C PT FS  FK  CP  YSY  DDATS   C     Y + FCP
Sbjct:   57 GGFHLGAGEEAALEVPAGW-SGRVWPRRGCSFDSRGRGSCATGDCGGVLRCNGAAGATPATVVEMTLGTSASAMHFYDVSLVDGFNAPVSMAAVGGGVGCGTAACGADVNVCCPSALEVRDREGRVAGCRSACRAMGGDRYCCTGDYASPSACRPTIFSHLFKAICPRAYSYAYDDATSLNRC-HAKRYLITFCP 249          
BLAST of CF836291 vs. ExPASy Swiss-Prot
Match: TLP_WHEAT (Thaumatin-like protein PWIR2 OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.209e-21
Identity = 65/187 (34.76%), Postives = 82/187 (43.85%), Query Frame = -2
Query:  194 AAVP-GGGRQLDKGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVFCP 751
            A +P GGG  L  GQT +I    GT+A RIWART C F+  G G C+TGDC G L C   G  P TLAEY +   +  DF D+S IDGFN+ M+FS           C+                          D   C   +C P           P  Y +P D   +T  C    +Y++ FCP
Sbjct:   36 AGIPVGGGFALGSGQTSSINVPAGTQAGRIWARTGCSFNG-GSGSCQTGDCGGQLSCSLSGRPPATLAEYTIGGGSTQDFYDISVIDGFNLAMDFS-----------CSTG------------------------DALQCRDPSCPP-----------PQAYQHPND--VATHACSGNNNYQITFCP 173          
The following BLAST results are available for this feature:
BLAST of CF836291 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
TLP_PRUAV1.289e-3142.61Glucan endo-1,3-beta-glucosidase OS=Prunus avium P... [more]
TP1A_MALDO1.683e-3140.44Thaumatin-like protein 1a OS=Malus domestica GN=TL... [more]
TLP2_PRUPE6.396e-3141.57Thaumatin-like protein 2 OS=Prunus persica PE=2 SV... [more]
TLP1_PRUPE4.146e-3040.98Thaumatin-like protein 1 OS=Prunus persica PE=2 SV... [more]
TLP1_CASSA5.415e-3039.88Thaumatin-like protein 1 OS=Castanea sativa GN=TL1... [more]
TLPH_ARATH5.987e-2939.09Thaumatin-like protein OS=Arabidopsis thaliana GN=... [more]
OLP1_SOLLC3.285e-2737.99Osmotin-like protein OS=Solanum lycopersicum PE=1 ... [more]
TLP_ORYSJ5.604e-2736.90Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]
TLPH_ORYSJ5.604e-2737.44Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]
TLP_WHEAT1.209e-2134.76Thaumatin-like protein PWIR2 OS=Triticum aestivum ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02L19_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02L19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836291 ID=CF836291; Name=CF836291; organism=Citrus sinensis; type=EST; length=755bp
TTTTTTTTTTTTTTAAGAAGCCCCATAAAATTTCAGTTATTCTCCTTTTA
ATTCACGCACATAACTACATGTGCCTGCTCCAGCTCTATGGCAGTGAAGA
CCGCACGGTCCTTATTCCAATATTATAACAAATACAGAAGACTACGTCGT
ATAGTTTTCTATTTCCATTTCTACCCCTGAAAAAAATGCTTCAGGGGCAG
AATACAACCTTGTAGTCGGTCCCACTCGGGCAAGTAAATGTGCTGGTAGC
GTCATCCTTAGGGTAACTGTAAACATCCGGGCACCTATCCTTGAAAAACT
TGGAGAAACCTGTAGGTCCGCAGTTGCCTGAATTGCAACAGTACTCGTCG
GTCTTGAACACGGGGCACGGCCCGTTACATCCTCCAGGAACCTTCAATTC
ATTAGGGCACTCGCCAAGAATGTTAGCAGTGCACTTGATCACGCGGTTGC
ATGAGGGAGAGACAGAGCTAAATTCCATGGGAACATTGAATCCGTCAATG
TTGGACATGTCAATGAAATCCATGTCATTGAATTGCTTCAACGCGTACTC
GGCCAAGGTGTTAGGTGCTGCACCGTAGCCTTGGCACTCGAGGAGTCCGT
TACAGTCACCGGTCTCGCATTTGCCTTTGCCGGAAGCATCAAACTGGCAT
TTGGTTCGAGCCCAAATGCGGGCTGCTTTTGTGCCTGGCGCGGCGGTGAT
GGTCCATGTTTGACCCTTGTCGAGTTGCCTGCCGCCTCCGGGCACAGCGG
CGGCC
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