CF836295
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836295 vs. ExPASy Swiss-Prot
Match: ARF1_SOLTU (ADP-ribosylation factor 1 OS=Solanum tuberosum PE=2 SV=2) HSP 1 Score: 171.014 bits (432), Expect = 2.178e-42 Identity = 78/150 (52.00%), Postives = 109/150 (72.67%), Query Frame = 1 Query: 1 ILXKPFIGEVLSTVPTIGFNDEKVQYKNVIFTDWDVGGTEKLRPLWRHYFNNTDGLIYVDDSLDRERIVKAKQEFHAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGL*LFDLKNRKWYIQGTCALIGYGLY*GLDWMASTLNEMRA 450 IL K +GE+++T+PTIGFN E V+YKN+ FT WDVGG +K+RPLWRHYF NT GLI+V DS DR+R+ +A++E ++ + + ++V+LVFANKQD+ AM E+ + L L L+ R WYIQ TCA G GLY GLDW+++ + +A Sbjct: 33 ILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNQIRNQKA 182
BLAST of CF836295 vs. ExPASy Swiss-Prot
Match: ARF1_PLAFO (ADP-ribosylation factor 1 OS=Plasmodium falciparum (isolate NF54) GN=ARF1 PE=2 SV=2) HSP 1 Score: 171.014 bits (432), Expect = 2.178e-42 Identity = 80/149 (53.69%), Postives = 109/149 (73.15%), Query Frame = 1 Query: 1 ILXKPFIGEVLSTVPTIGFNDEKVQYKNVIFTDWDVGGTEKLRPLWRHYFNNTDGLIYVDDSLDRERIVKAKQEFHAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGL*LFDLKNRKWYIQGTCALIGYGLY*GLDWMASTLNEMR 447 IL K +GEV++T+PTIGFN E V+++N+ FT WDVGG +K+RPLWRHY++NTDGLI+V DS DRERI A++ H +I + + +++ILVFANKQD+ AM+ EV E L L ++ R W+IQ TCA G GLY G DW+ + LN + Sbjct: 33 ILYKVKLGEVVTTIPTIGFNVETVEFRNISFTVWDVGGQDKIRPLWRHYYSNTDGLIFVVDSNDRERIDDAREGLHRMINEEELKDAIILVFANKQDLPNAMSAAEVTEKLHLNTIRERNWFIQSTCATRGDGLYEGFDWLTTHLNNAK 181
BLAST of CF836295 vs. ExPASy Swiss-Prot
Match: ARF1_DICDI (ADP-ribosylation factor 1 OS=Dictyostelium discoideum GN=arfA PE=1 SV=3) HSP 1 Score: 170.629 bits (431), Expect = 2.844e-42 Identity = 81/145 (55.86%), Postives = 108/145 (74.48%), Query Frame = 1 Query: 1 ILXKPFIGEVLSTVPTIGFNDEKVQYKNVIFTDWDVGGTEKLRPLWRHYFNNTDGLIYVDDSLDRERIVKAKQEFHAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGL*LFDLKNRKWYIQGTCALIGYGLY*GLDWMASTL 435 IL K +GE+++T+PTIGFN E V++KN+ FT WDVGG +K+RPLWRHYF NT GLI+V DS DRERI +A E ++ + + ++V+LVF NKQD+ AM+ EV + L L L++RKWYIQ TCA G GLY GLDW+++TL Sbjct: 33 ILYKLKLGEIVTTIPTIGFNVETVEFKNINFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIQEACDELTKMLNEDELRDAVLLVFCNKQDLPNAMSVAEVTDKLNLHSLRSRKWYIQSTCATSGDGLYEGLDWLSNTL 177
BLAST of CF836295 vs. ExPASy Swiss-Prot
Match: ARF_NEUCR (ADP-ribosylation factor OS=Neurospora crassa GN=NCU08340 PE=3 SV=3) HSP 1 Score: 170.244 bits (430), Expect = 3.715e-42 Identity = 77/147 (52.38%), Postives = 109/147 (74.15%), Query Frame = 1 Query: 1 ILXKPFIGEVLSTVPTIGFNDEKVQYKNVIFTDWDVGGTEKLRPLWRHYFNNTDGLIYVDDSLDRERIVKAKQEFHAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGL*LFDLKNRKWYIQGTCALIGYGLY*GLDWMASTLNE 441 IL K +GEV++T+PTIGFN E V+YKN+ FT WDVGG +K+RPLWRHYF NT G+I+V DS DR+R+V+A++E ++ + + ++++LVFANKQD+ AM E+ + L L L+ R WYIQ TCA G GL+ GLDW+++ L + Sbjct: 36 ILYKLKLGEVVTTIPTIGFNVETVEYKNIQFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRVVEAREELQRMLNEDELRDALLLVFANKQDLPNAMNAAEITDKLGLSSLRQRSWYIQATCATTGDGLFEGLDWLSTELKK 182
BLAST of CF836295 vs. ExPASy Swiss-Prot
Match: ARF2_RAT (ADP-ribosylation factor 2 OS=Rattus norvegicus GN=Arf2 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 4.852e-42 Identity = 78/149 (52.35%), Postives = 107/149 (71.81%), Query Frame = 1 Query: 1 ILXKPFIGEVLSTVPTIGFNDEKVQYKNVIFTDWDVGGTEKLRPLWRHYFNNTDGLIYVDDSLDRERIVKAKQEFHAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGL*LFDLKNRKWYIQGTCALIGYGLY*GLDWMASTLNEMR 447 IL K +GE+++T+PTIGFN E V+YKN+ FT WDVGG +K+RPLWRHYF NT GLI+V DS DRER+ +A++E ++ + + ++V+LVF NKQD+ AM E+ + L L L+ R WYIQ TCA G GLY GLDW+++ L + Sbjct: 33 ILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVFVNKQDLPNAMNAAEITDKLGLHSLRQRNWYIQATCATSGDGLYEGLDWLSNQLKNQK 181
BLAST of CF836295 vs. ExPASy Swiss-Prot
Match: ARF2_MOUSE (ADP-ribosylation factor 2 OS=Mus musculus GN=Arf2 PE=1 SV=2) HSP 1 Score: 169.859 bits (429), Expect = 4.852e-42 Identity = 78/149 (52.35%), Postives = 107/149 (71.81%), Query Frame = 1 Query: 1 ILXKPFIGEVLSTVPTIGFNDEKVQYKNVIFTDWDVGGTEKLRPLWRHYFNNTDGLIYVDDSLDRERIVKAKQEFHAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGL*LFDLKNRKWYIQGTCALIGYGLY*GLDWMASTLNEMR 447 IL K +GE+++T+PTIGFN E V+YKN+ FT WDVGG +K+RPLWRHYF NT GLI+V DS DRER+ +A++E ++ + + ++V+LVF NKQD+ AM E+ + L L L+ R WYIQ TCA G GLY GLDW+++ L + Sbjct: 33 ILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVFVNKQDLPNAMNAAEITDKLGLHSLRQRNWYIQATCATSGDGLYEGLDWLSNQLKNQK 181
BLAST of CF836295 vs. ExPASy Swiss-Prot
Match: ARF2_BOVIN (ADP-ribosylation factor 2 OS=Bos taurus GN=ARF2 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 4.852e-42 Identity = 78/149 (52.35%), Postives = 107/149 (71.81%), Query Frame = 1 Query: 1 ILXKPFIGEVLSTVPTIGFNDEKVQYKNVIFTDWDVGGTEKLRPLWRHYFNNTDGLIYVDDSLDRERIVKAKQEFHAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGL*LFDLKNRKWYIQGTCALIGYGLY*GLDWMASTLNEMR 447 IL K +GE+++T+PTIGFN E V+YKN+ FT WDVGG +K+RPLWRHYF NT GLI+V DS DRER+ +A++E ++ + + ++V+LVF NKQD+ AM E+ + L L L+ R WYIQ TCA G GLY GLDW+++ L + Sbjct: 33 ILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVFVNKQDLPNAMNAAEITDKLGLHSLRQRNWYIQATCATSGDGLYEGLDWLSNQLKNQK 181
BLAST of CF836295 vs. ExPASy Swiss-Prot
Match: ARF4_BOVIN (ADP-ribosylation factor 4 OS=Bos taurus GN=ARF4 PE=2 SV=3) HSP 1 Score: 169.474 bits (428), Expect = 6.337e-42 Identity = 78/147 (53.06%), Postives = 109/147 (74.15%), Query Frame = 1 Query: 1 ILXKPFIGEVLSTVPTIGFNDEKVQYKNVIFTDWDVGGTEKLRPLWRHYFNNTDGLIYVDDSLDRERIVKAKQEFHAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGL*LFDLKNRKWYIQGTCALIGYGLY*GLDWMASTLNE 441 IL K +GE+++T+PTIGFN E V+YKN+ FT WDVGG +K+RPLWRHYF NT GLI+V DS DRERI + +E ++++ + ++V+L+FANKQD+ AM E+ + L L L+NR WY+Q TCA G GLY GLDW+++ L++ Sbjct: 33 ILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIQEGAEELQKMLQEDELRDAVLLLFANKQDLPNAMAISEMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLDWLSNELSK 179
BLAST of CF836295 vs. ExPASy Swiss-Prot
Match: ARF_ASHGO (ADP-ribosylation factor OS=Ashbya gossypii GN=ARF1 PE=3 SV=3) HSP 1 Score: 169.088 bits (427), Expect = 8.276e-42 Identity = 77/145 (53.10%), Postives = 107/145 (73.79%), Query Frame = 1 Query: 1 ILXKPFIGEVLSTVPTIGFNDEKVQYKNVIFTDWDVGGTEKLRPLWRHYFNNTDGLIYVDDSLDRERIVKAKQEFHAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGL*LFDLKNRKWYIQGTCALIGYGLY*GLDWMASTL 435 +L K +GEV++T+PTIGFN E V+YKN+ FT WDVGG +K+RPLWRHYF NT+G+I+V DS DR RI +A++ ++ + + N+V+LVFANKQD+ AM+ E+ E L L ++ R WYIQ TCA G GLY GL+W+++ L Sbjct: 33 VLYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFRNTEGIIFVVDSNDRSRIAEAREVLQRMLNEDEIRNAVLLVFANKQDLPEAMSAAEITEKLGLHSIRQRPWYIQATCATSGEGLYEGLEWLSTNL 177
BLAST of CF836295 vs. ExPASy Swiss-Prot
Match: ARF5_CHICK (ADP-ribosylation factor 5 OS=Gallus gallus GN=ARF5 PE=2 SV=2) HSP 1 Score: 168.703 bits (426), Expect = 1.081e-41 Identity = 78/147 (53.06%), Postives = 109/147 (74.15%), Query Frame = 1 Query: 1 ILXKPFIGEVLSTVPTIGFNDEKVQYKNVIFTDWDVGGTEKLRPLWRHYFNNTDGLIYVDDSLDRERIVKAKQEFHAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGL*LFDLKNRKWYIQGTCALIGYGLY*GLDWMASTLNE 441 IL K +GE+++T+PTIGFN E V+YKN+ FT WDVGG +K+RPLWRHYF NT GLI+V DS DRER+ ++ +E ++++ + ++V+LVFANKQDM AM E+ + L L L++R WY+Q TCA G GLY GLDW++ L++ Sbjct: 33 ILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESAEELQKMLQEDELRDAVLLVFANKQDMPNAMVVSELTDKLGLQALRSRTWYVQATCATQGTGLYDGLDWLSHELSK 179 The following BLAST results are available for this feature:
BLAST of CF836295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 161
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836295 ID=CF836295; Name=CF836295; organism=Citrus sinensis; type=EST; length=462bpback to top |