CF836295
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836295 vs. ExPASy Swiss-Prot
Match: ARF_CRYNE (ADP-ribosylation factor OS=Cryptococcus neoformans GN=ARF PE=1 SV=3) HSP 1 Score: 168.318 bits (425), Expect = 1.412e-41 Identity = 76/145 (52.41%), Postives = 106/145 (73.10%), Query Frame = 1 Query: 1 ILXKPFIGEVLSTVPTIGFNDEKVQYKNVIFTDWDVGGTEKLRPLWRHYFNNTDGLIYVDDSLDRERIVKAKQEFHAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGL*LFDLKNRKWYIQGTCALIGYGLY*GLDWMASTL 435 IL K +GE+++T+PTIGFN E V+YKN+ FT WDVGG +K+RPLWRHYF NT G+I+V DS DRERI +A++E ++ + + ++++LVFANKQD+ AM E+ + L L L+ R WYIQ CA G GLY GL+W+++ L Sbjct: 33 ILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRERITEAREELQRMLSEDELRDALLLVFANKQDLPNAMNAAEITDKLGLHSLRQRSWYIQAACATSGDGLYEGLEWLSANL 177
BLAST of CF836295 vs. ExPASy Swiss-Prot
Match: ARF5_RAT (ADP-ribosylation factor 5 OS=Rattus norvegicus GN=Arf5 PE=1 SV=2) HSP 1 Score: 167.933 bits (424), Expect = 1.844e-41 Identity = 78/147 (53.06%), Postives = 108/147 (73.47%), Query Frame = 1 Query: 1 ILXKPFIGEVLSTVPTIGFNDEKVQYKNVIFTDWDVGGTEKLRPLWRHYFNNTDGLIYVDDSLDRERIVKAKQEFHAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGL*LFDLKNRKWYIQGTCALIGYGLY*GLDWMASTLNE 441 IL K +GE+++T+PTIGFN E V+YKN+ FT WDVGG +K+RPLWRHYF NT GLI+V DS DRER+ ++ E ++++ + ++V+LVFANKQDM AM E+ + L L L++R WY+Q TCA G GLY GLDW++ L++ Sbjct: 33 ILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFANKQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDWLSHELSK 179
BLAST of CF836295 vs. ExPASy Swiss-Prot
Match: ARF5_MOUSE (ADP-ribosylation factor 5 OS=Mus musculus GN=Arf5 PE=2 SV=2) HSP 1 Score: 167.933 bits (424), Expect = 1.844e-41 Identity = 78/147 (53.06%), Postives = 108/147 (73.47%), Query Frame = 1 Query: 1 ILXKPFIGEVLSTVPTIGFNDEKVQYKNVIFTDWDVGGTEKLRPLWRHYFNNTDGLIYVDDSLDRERIVKAKQEFHAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGL*LFDLKNRKWYIQGTCALIGYGLY*GLDWMASTLNE 441 IL K +GE+++T+PTIGFN E V+YKN+ FT WDVGG +K+RPLWRHYF NT GLI+V DS DRER+ ++ E ++++ + ++V+LVFANKQDM AM E+ + L L L++R WY+Q TCA G GLY GLDW++ L++ Sbjct: 33 ILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFANKQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDWLSHELSK 179
BLAST of CF836295 vs. ExPASy Swiss-Prot
Match: ARF5_HUMAN (ADP-ribosylation factor 5 OS=Homo sapiens GN=ARF5 PE=1 SV=2) HSP 1 Score: 167.933 bits (424), Expect = 1.844e-41 Identity = 78/147 (53.06%), Postives = 108/147 (73.47%), Query Frame = 1 Query: 1 ILXKPFIGEVLSTVPTIGFNDEKVQYKNVIFTDWDVGGTEKLRPLWRHYFNNTDGLIYVDDSLDRERIVKAKQEFHAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGL*LFDLKNRKWYIQGTCALIGYGLY*GLDWMASTLNE 441 IL K +GE+++T+PTIGFN E V+YKN+ FT WDVGG +K+RPLWRHYF NT GLI+V DS DRER+ ++ E ++++ + ++V+LVFANKQDM AM E+ + L L L++R WY+Q TCA G GLY GLDW++ L++ Sbjct: 33 ILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFANKQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDWLSHELSK 179
BLAST of CF836295 vs. ExPASy Swiss-Prot
Match: ARF1_SCHPO (ADP-ribosylation factor 1 OS=Schizosaccharomyces pombe GN=arf1 PE=2 SV=2) HSP 1 Score: 167.933 bits (424), Expect = 1.844e-41 Identity = 76/145 (52.41%), Postives = 108/145 (74.48%), Query Frame = 1 Query: 1 ILXKPFIGEVLSTVPTIGFNDEKVQYKNVIFTDWDVGGTEKLRPLWRHYFNNTDGLIYVDDSLDRERIVKAKQEFHAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGL*LFDLKNRKWYIQGTCALIGYGLY*GLDWMASTL 435 IL K +GE+++T+PTIGFN E V+Y+N+ FT WDVGG +K+RPLWRHYF NT G+I+V DS DRERI +A +E ++ + + ++++LVFANKQD+ AM E+ + L L L++R+WYIQ TCA G GLY GL+W+++ L Sbjct: 33 ILYKLKLGEIVTTIPTIGFNVETVEYRNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRERISEAHEELQRMLNEDELRDALLLVFANKQDLPNAMNAAEITDKLGLHSLRHRQWYIQATCATSGDGLYEGLEWLSTNL 177
BLAST of CF836295 vs. ExPASy Swiss-Prot
Match: ARF1_CATRO (ADP-ribosylation factor 1 OS=Catharanthus roseus GN=ARF1 PE=2 SV=3) HSP 1 Score: 166.392 bits (420), Expect = 5.364e-41 Identity = 75/145 (51.72%), Postives = 106/145 (73.10%), Query Frame = 1 Query: 1 ILXKPFIGEVLSTVPTIGFNDEKVQYKNVIFTDWDVGGTEKLRPLWRHYFNNTDGLIYVDDSLDRERIVKAKQEFHAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGL*LFDLKNRKWYIQGTCALIGYGLY*GLDWMASTL 435 IL + +GE+++T+PTIGFN E V+Y+ + FT WDVGG +K+RPLWRHYF NT GLI+V DS DR+R+V+A+ E H ++ + + ++V+LVFANKQD+ AM E+ + L L+ R WYIQ TCA G GLY GLDW+++ + Sbjct: 33 ILYQLKLGEIVTTIPTIGFNVETVEYQYISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKHGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 177
BLAST of CF836295 vs. ExPASy Swiss-Prot
Match: ARF4_RAT (ADP-ribosylation factor 4 OS=Rattus norvegicus GN=Arf4 PE=2 SV=2) HSP 1 Score: 164.466 bits (415), Expect = 2.038e-40 Identity = 77/147 (52.38%), Postives = 106/147 (72.11%), Query Frame = 1 Query: 1 ILXKPFIGEVLSTVPTIGFNDEKVQYKNVIFTDWDVGGTEKLRPLWRHYFNNTDGLIYVDDSLDRERIVKAKQEFHAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGL*LFDLKNRKWYIQGTCALIGYGLY*GLDWMASTLNE 441 IL K +GE+++T+PTIGFN E V+YKN+ FT WDVGG +K+RPLWRHYF NT GLI+V DS DRERI + ++ + + ++V+L+FANKQD+ AM E+ + L L L+NR WY+Q TCA G GLY GLDW+++ L++ Sbjct: 33 ILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIQEGAAVLQKMLLEDELQDAVLLLFANKQDLPNAMAISEMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLDWLSNELSK 179
BLAST of CF836295 vs. ExPASy Swiss-Prot
Match: ARF4_MOUSE (ADP-ribosylation factor 4 OS=Mus musculus GN=Arf4 PE=2 SV=2) HSP 1 Score: 164.466 bits (415), Expect = 2.038e-40 Identity = 77/147 (52.38%), Postives = 106/147 (72.11%), Query Frame = 1 Query: 1 ILXKPFIGEVLSTVPTIGFNDEKVQYKNVIFTDWDVGGTEKLRPLWRHYFNNTDGLIYVDDSLDRERIVKAKQEFHAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGL*LFDLKNRKWYIQGTCALIGYGLY*GLDWMASTLNE 441 IL K +GE+++T+PTIGFN E V+YKN+ FT WDVGG +K+RPLWRHYF NT GLI+V DS DRERI + ++ + + ++V+L+FANKQD+ AM E+ + L L L+NR WY+Q TCA G GLY GLDW+++ L++ Sbjct: 33 ILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIQEGAAVLQKMLLEDELQDAVLLLFANKQDLPNAMAISEMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLDWLSNELSK 179
BLAST of CF836295 vs. ExPASy Swiss-Prot
Match: ARF_GIALA (ADP-ribosylation factor OS=Giardia lamblia PE=3 SV=3) HSP 1 Score: 163.696 bits (413), Expect = 3.477e-40 Identity = 81/144 (56.25%), Postives = 103/144 (71.53%), Query Frame = 1 Query: 1 ILXKPFIGEVLSTVPTIGFNDEKVQYKNVIFTDWDVGGTEKLRPLWRHYFNNTDGLIYVDDSLDRE--RIVKAKQEFHAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGL*LFDLKNRKWYIQGTCALIGYGLY*GLDWMA 426 IL K +GEV++TVPTIGFN E V+YKN+ FT WDVGG + +RPLWRHY+ NTD LIYV DS D E RI AK E H ++ + + ++ +LVFANKQD+ AM+ ++ E L L +LK R WYIQ TCA G GLY GLDW++ Sbjct: 33 ILYKLMLGEVVTTVPTIGFNVETVEYKNINFTVWDVGGQDSIRPLWRHYYQNTDALIYVIDSADLEPKRIEDAKNELHTLLGEDELRDAALLVFANKQDLPKAMSTTDLTERLGLQELKKRDWYIQPTCARSGDGLYQGLDWLS 176
BLAST of CF836295 vs. ExPASy Swiss-Prot
Match: ARF6_CHICK (ADP-ribosylation factor 6 OS=Gallus gallus GN=ARF6 PE=2 SV=3) HSP 1 Score: 163.696 bits (413), Expect = 3.477e-40 Identity = 77/143 (53.85%), Postives = 102/143 (71.33%), Query Frame = 1 Query: 1 ILXKPFIGEVLSTVPTIGFNDEKVQYKNVIFTDWDVGGTEKLRPLWRHYFNNTDGLIYVDDSLDRERIVKAKQEFHAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGL*LFDLKNRKWYIQGTCALIGYGLY*GLDWMAS 429 IL K +G+ ++T+PT+GFN E V YKNV F WDVGG +K+RPLWRHY+ T GLI+V D DR+RI +A+QE H II D M +++IL+FANKQD+ AM P E+ E L L +++R WY+Q +CA G GLY GL W+ S Sbjct: 29 ILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATTGDGLYEGLTWLTS 171 The following BLAST results are available for this feature:
BLAST of CF836295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 161
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836295 ID=CF836295; Name=CF836295; organism=Citrus sinensis; type=EST; length=462bpback to top |