CF836295
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836295 vs. ExPASy Swiss-Prot
Match: ARF4_ARATH (Probable ADP-ribosylation factor At2g15310 OS=Arabidopsis thaliana GN=At2g15310 PE=2 SV=3) HSP 1 Score: 158.688 bits (400), Expect = 1.119e-38 Identity = 77/145 (53.10%), Postives = 100/145 (68.97%), Query Frame = 1 Query: 1 ILXKPFIGEVLSTVPTIGFNDEKVQYKNVIFTDWDVGGTEKLRPLWRHYFNNTDGLIYVDDSLDRERIVKAKQEFHAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGL*LFDLKNRKWYIQGTCALIGYGLY*GLDWMASTL 435 IL K +GEV++TVPTIGFN E V+YK + FT WD+GG EK+R LWRHYF N GLI+V DS D ER+ +A+ E H I+ D + + +LVFANKQD + A+ EV L L L R W IQGT A+ G GLY GL+W+++T+ Sbjct: 33 ILYKLKLGEVVTTVPTIGFNLETVEYKGINFTVWDIGGQEKIRKLWRHYFQNAQGLIFVVDSSDSERLSEARNELHRILTDNELEGACVLVFANKQDSRNALPVAEVANKLGLHSLSKRCWLIQGTSAISGQGLYEGLEWLSTTI 177
BLAST of CF836295 vs. ExPASy Swiss-Prot
Match: ARF3_DROME (ADP-ribosylation factor 3 OS=Drosophila melanogaster GN=Arf51F PE=2 SV=3) HSP 1 Score: 156.762 bits (395), Expect = 4.250e-38 Identity = 75/143 (52.45%), Postives = 100/143 (69.93%), Query Frame = 1 Query: 1 ILXKPFIGEVLSTVPTIGFNDEKVQYKNVIFTDWDVGGTEKLRPLWRHYFNNTDGLIYVDDSLDRERIVKAKQEFHAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGL*LFDLKNRKWYIQGTCALIGYGLY*GLDWMAS 429 IL K +G+ ++T+PT+GFN E V YKNV F WDVGG +K+RPLWRHY+ T GLI+V D DR+RI +A+ E H II D M +++IL+FANKQD+ AM P E+ E L L +++R WY+Q +CA G GL GL W+ S Sbjct: 29 ILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARTELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLSEGLIWLTS 171
BLAST of CF836295 vs. ExPASy Swiss-Prot
Match: ARF3_ARATH (ADP-ribosylation factor 3 OS=Arabidopsis thaliana GN=ARF3 PE=1 SV=2) HSP 1 Score: 156.762 bits (395), Expect = 4.250e-38 Identity = 76/145 (52.41%), Postives = 103/145 (71.03%), Query Frame = 1 Query: 1 ILXKPFIGEVLSTVPTIGFNDEKVQYKNVIFTDWDVGGTEKLRPLWRHYFNNTDGLIYVDDSLDRERIVKAKQEFHAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGL*LFDLKNRKWYIQGTCALIGYGLY*GLDWMASTL 435 IL + +GEV+ST+PTIGFN E VQY N+ F WD+GG +RP WR YF NT +IYV DS D +RI AK+EFHAI+++ + +V+L+FANKQD+ GA+ V E L L +K+R+W I TCA+ G GL+ GLDW+++TL Sbjct: 33 ILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLGGQTSIRPYWRCYFPNTQAVIYVVDSSDTDRIGVAKEEFHAILEEDELKGAVVLIFANKQDLPGALDDAAVTEALELHKIKSRQWAIFKTCAVKGEGLFEGLDWLSNTL 177
BLAST of CF836295 vs. ExPASy Swiss-Prot
Match: ARF1_BRARP (ADP-ribosylation factor 1 OS=Brassica rapa subsp. pekinensis GN=ARF1 PE=2 SV=3) HSP 1 Score: 156.762 bits (395), Expect = 4.250e-38 Identity = 76/145 (52.41%), Postives = 103/145 (71.03%), Query Frame = 1 Query: 1 ILXKPFIGEVLSTVPTIGFNDEKVQYKNVIFTDWDVGGTEKLRPLWRHYFNNTDGLIYVDDSLDRERIVKAKQEFHAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGL*LFDLKNRKWYIQGTCALIGYGLY*GLDWMASTL 435 IL + +GEV+ST+PTIGFN E VQY N+ F WD+GG +RP WR YF NT +IYV DS D +RI AK+EFHAI+++ + +V+L+FANKQD+ GA+ V E L L +K+R+W I TCA+ G GL+ GLDW+++TL Sbjct: 33 ILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLGGQTSIRPYWRCYFPNTQAVIYVVDSSDTDRIGVAKEEFHAILEEEELKGAVVLIFANKQDLPGALDDAAVTEALELHKIKSRQWAIFKTCAVKGEGLFEGLDWLSNTL 177
BLAST of CF836295 vs. ExPASy Swiss-Prot
Match: ARF2_SCHPO (Probable ADP-ribosylation factor OS=Schizosaccharomyces pombe GN=SPBC1539.08 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 6.137e-37 Identity = 74/142 (52.11%), Postives = 98/142 (69.01%), Query Frame = 1 Query: 1 ILXKPFIGEVLSTVPTIGFNDEKVQYKNVIFTDWDVGGTEKLRPLWRHYFNNTDGLIYVDDSLDRERIVKAKQEFHAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGL*LFDLKNRKWYIQGTCALIGYGLY*GLDWMA 426 IL K + + + T+PT+GFN E V YKN+ F WDVGG +K+RPLWRHYF T GLI+V DS D RI +A+QE H II D M + ++LV ANKQD+ GA++P ++ + L L LK+R W +Q TCAL G GL GL W++ Sbjct: 37 ILYKLKLNQSVVTIPTVGFNVETVTYKNIKFNVWDVGGQDKIRPLWRHYFTGTKGLIFVVDSADSNRISEARQELHRIISDREMRDCLLLVLANKQDLPGALSPAQITDVLQLDKLKDRLWNVQPTCALTGDGLLEGLAWLS 178
BLAST of CF836295 vs. ExPASy Swiss-Prot
Match: ARFJ_DICDI (ADP-ribosylation factor J OS=Dictyostelium discoideum GN=arrJ PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 5.196e-36 Identity = 69/146 (47.26%), Postives = 101/146 (69.18%), Query Frame = 1 Query: 1 ILXKPFIGEVLSTVPTIGFNDEKVQYKNVIFTDWDVGGTEKLRPLWRHYFNNTDGLIYVDDSLDRERIVKAKQEFHAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGL*LFDLKNRKWYIQGTCALIGYGLY*GLDWMASTLN 438 +L K +G+V+ST+PTIGFN E ++YKN+ T WDVGG K+RPLW+HY++ ++ +I+V DS DRER+ + K+E ++ + + ILVFANKQDM AM E+ L L +K+RKWY+Q A+ G+Y G DW+A++LN Sbjct: 41 LLYKLKLGDVVSTIPTIGFNVETIEYKNLSMTVWDVGGQHKIRPLWKHYYHGSNAVIFVVDSTDRERMDEVKEEIDNLLIQDELKGTQILVFANKQDMNNAMNTAEIVNSLDLNSIKDRKWYVQPCSAIRSDGIYEGFDWVANSLN 186
BLAST of CF836295 vs. ExPASy Swiss-Prot
Match: ARFH_DICDI (ADP-ribosylation factor H OS=Dictyostelium discoideum GN=arrH PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 1.280e-34 Identity = 68/147 (46.26%), Postives = 101/147 (68.71%), Query Frame = 1 Query: 1 ILXKPFIGEVLSTVPTIGFNDEKVQYKNVIFTDWDVGGTEKLRPLWRHYFNNTDGLIYVDDSLDRERIVKAKQEFHAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGL*LFDLKNRKWYIQGTCALIG-YGLY*GLDWMASTLN 438 +L K +G+++STVPTIGFN E ++YKN+ T WDVGG K+R LW+HY++ T+ +I+V DS DRER+ + K+E ++ + IL+FANKQDM AM E+ + L L +K+RKWY+Q A+ +G+Y G DW+A++LN Sbjct: 41 LLYKLKLGDIVSTVPTIGFNVETIEYKNLSMTVWDVGGQYKIRALWKHYYHGTNAIIFVVDSTDRERMDEVKEEIDTLLIQEELKGIQILIFANKQDMNNAMNTSEIVDSLNLNSIKDRKWYVQPCSAIKSPHGIYEGFDWVANSLN 187
BLAST of CF836295 vs. ExPASy Swiss-Prot
Match: ARL1_RAT (ADP-ribosylation factor-like protein 1 OS=Rattus norvegicus GN=Arl1 PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 8.295e-34 Identity = 71/145 (48.97%), Postives = 99/145 (68.28%), Query Frame = 1 Query: 1 ILXKPFIGEVLSTVPTIGFNDEKVQYKNVIFTDWDVGGTEKLRPLWRHYFNNTDGLIYVDDSLDRERIVKAKQEFHAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGL*LFDLKNRKWYIQGTCALIGYGLY*GLDWMASTL 435 IL + +GEV++T+PTIGFN E V YKN+ F WD+GG +RP WR Y++NTD +IYV DS DR+RI +K E A++++ + ++++VFANKQDM+ AMTP E+ L L LK+RKW I T A G GL ++W+ TL Sbjct: 33 ILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTPSEMANALGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETL 177
BLAST of CF836295 vs. ExPASy Swiss-Prot
Match: ARL1_MOUSE (ADP-ribosylation factor-like protein 1 OS=Mus musculus GN=Arl1 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 8.295e-34 Identity = 71/145 (48.97%), Postives = 99/145 (68.28%), Query Frame = 1 Query: 1 ILXKPFIGEVLSTVPTIGFNDEKVQYKNVIFTDWDVGGTEKLRPLWRHYFNNTDGLIYVDDSLDRERIVKAKQEFHAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGL*LFDLKNRKWYIQGTCALIGYGLY*GLDWMASTL 435 IL + +GEV++T+PTIGFN E V YKN+ F WD+GG +RP WR Y++NTD +IYV DS DR+RI +K E A++++ + ++++VFANKQDM+ AMTP E+ L L LK+RKW I T A G GL ++W+ TL Sbjct: 33 ILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTPSEMANALGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETL 177
BLAST of CF836295 vs. ExPASy Swiss-Prot
Match: ARL1_BOVIN (ADP-ribosylation factor-like protein 1 OS=Bos taurus GN=ARL1 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 8.295e-34 Identity = 71/145 (48.97%), Postives = 99/145 (68.28%), Query Frame = 1 Query: 1 ILXKPFIGEVLSTVPTIGFNDEKVQYKNVIFTDWDVGGTEKLRPLWRHYFNNTDGLIYVDDSLDRERIVKAKQEFHAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGL*LFDLKNRKWYIQGTCALIGYGLY*GLDWMASTL 435 IL + +GEV++T+PTIGFN E V YKN+ F WD+GG +RP WR Y++NTD +IYV DS DR+RI +K E A++++ + ++++VFANKQDM+ AMTP E+ L L LK+RKW I T A G GL ++W+ TL Sbjct: 33 ILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTPSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETL 177 The following BLAST results are available for this feature:
BLAST of CF836295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 161
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836295 ID=CF836295; Name=CF836295; organism=Citrus sinensis; type=EST; length=462bpback to top |