CF836429
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF836429 vs. ExPASy Swiss-Prot
Match: ABCCC_DICDI (ABC transporter C family member 12 OS=Dictyostelium discoideum GN=abcC12 PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.478e-41 Identity = 97/263 (36.88%), Postives = 139/263 (52.85%), Query Frame = -3 Query: 3 SRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMILLPSSIIKPEXXXXXXXXXXXXXXXLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEE 791 SR L R+++IT++P+ +HFSE+++GV++IRA+ KQ +N R++ N N WLG RL+ LG+ + +F I L I P L + + E +M SVERI Q+ EA ++D P P+WP +G++ +L +RYR VLKGIT I EKIG+VGRTG+GKS+++ FRL+E S LR IIPQ+PVLF GT+R N+DP + D E Sbjct: 891 SRGLQRIEAITRSPIFNHFSETLNGVVSIRAYKKQQENILKNQKRLDDNNNCYLTLQAMNRWLGLRLDFLGNLIVFFSCIF-ITLKKDTISPSDVGLVLSYALSITSNLNQGVLQAADTETKMNSVERISQYIRGAVEAPQIIDDCRPSPDWPINGSIKFDNLVMRYREGLDPVLKGITCEIKAKEKIGIVGRTGAGKSSIVLALFRLIEASEGSISIDGENIAKFGLKDLRRNLAIIPQDPVLFSGTLRENLDPFNECPDHE 1152
BLAST of CF836429 vs. ExPASy Swiss-Prot
Match: ABCC3_DICDI (ABC transporter C family member 3 OS=Dictyostelium discoideum GN=abcC3 PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.478e-41 Identity = 99/263 (37.64%), Postives = 140/263 (53.23%), Query Frame = -3 Query: 3 SRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMILLPSSIIKPEXXXXXXXXXXXXXXXLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEE 791 SREL RL++I+++P+ HFSE++ GV++IRA+ K+ N R++ N + N+WLG RL+LL + A LF I + I L A + E +M SVERI + + P EA +ED P P+WP HG + +L +RYR VLKGI+ I EKIG+VGRTG+GKS+++ FRL+E S LR IIPQ+PVLF GT+R NIDP + +D++ Sbjct: 906 SRELQRLEAISRSPIFSHFSETLGGVVSIRAYRKKEENILTNQFRLDNNNKCYLTLQAMNQWLGLRLDLLANLVTFFACLF-ITIDRDTISAANVGLSLSYALSLTGNLNRATLQAADTETKMNSVERITHYIKGPVEALQIVEDHRPAPDWPPHGAITFDNLVMRYREGLDPVLKGISCEIKAKEKIGIVGRTGAGKSSIVLALFRLIEASEGAILIDGENIAKFGLKDLRRNLAIIPQDPVLFSGTLRENIDPFNEKTDDQ 1167
BLAST of CF836429 vs. ExPASy Swiss-Prot
Match: ABCCA_DICDI (ABC transporter C family member 10 OS=Dictyostelium discoideum GN=abcC10 PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.300e-41 Identity = 97/263 (36.88%), Postives = 140/263 (53.23%), Query Frame = -3 Query: 3 SRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMILLPSSIIKPEXXXXXXXXXXXXXXXLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEE 791 SR L R+++IT++P+ +HFSE+++GV++IRA+ KQ N R++ N N WLG RL+ L + A +F I + I P L +A + E +M SVERI Q+ EA ++D P P+WP +G++ +L +RYR VLKGIT I EKIG+VGRTG+GKS+++ FRL+E S LR IIPQ+PVLF GT+R N+DP + S+E+ Sbjct: 897 SRGLQRIEAITRSPIFNHFSETLNGVVSIRAYKKQQENILINQKRLDDNNNCYLTLQAMNRWLGLRLDFLANLITFFACIF-ITIDKDTISPANVGLALGYALSLTGNLNYAALQAADTETKMNSVERISQYIRGAVEAPQIIDDCRPSPDWPINGSIKFDNLVMRYREGLDPVLKGITCEIKAKEKIGIVGRTGAGKSSIVLALFRLIEASEGSISIDGENIAKFGLKDLRRNLAIIPQDPVLFSGTLRENLDPFNERSEED 1158
BLAST of CF836429 vs. ExPASy Swiss-Prot
Match: AB1C_ARATH (ABC transporter C family member 1 OS=Arabidopsis thaliana GN=ABCC1 PE=1 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.134e-40 Identity = 91/267 (34.08%), Postives = 139/267 (52.06%), Query Frame = -3 Query: 3 SRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMILLPSSIIKPEXXXXXXXXXXXXXXXLFWAIY----MSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEE 791 SRE+ R+DS T++PV F E+++G+ +IRA+ + N ++ N+R N +N WLG RLE+LG L ++ + + ++ ++ EN + SVER+ + EIPSEA +E+ PPP WP+ G++ D+ +RYR P VL G++ I +K+G+VGRTG+GKS+L+ FR+VE LR GIIPQ PVLF GTVR N+DP +++D + Sbjct: 1076 SREIKRMDSTTRSPVYAQFGEALNGLSSIRAYKAYDRMAEINGRSMDNNIRFTLVNMAANRWLGIRLEVLGGLMVWLTASLAVMQNGKAANQQAYASTMGLLLSYALSITSSLTAVLRLASLAENSLNSVERVGNYIEIPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGVSFLISPMDKVGIVGRTGAGKSSLLNALFRIVELEKGRILIDECDIGRFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFSEHNDAD 1342
BLAST of CF836429 vs. ExPASy Swiss-Prot
Match: MRP5_HUMAN (Multidrug resistance-associated protein 5 OS=Homo sapiens GN=ABCC5 PE=1 SV=2) HSP 1 Score: 165.622 bits (418), Expect = 2.787e-40 Identity = 100/263 (38.02%), Postives = 139/263 (52.85%), Query Frame = -3 Query: 3 RELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMILLPSSIIKPEXXXXXXXXXXXXXXXLFWAIYMSCFVENRMVSVERIKQFTEIPS-EAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEE 788 REL RLD+IT++P + H + SI G+ TI A+ K F ++ N F + WL RL+L+ S T MI+L I P + + ++ E R SVERI + + S EA +++++ P P+WP G V + ++RYR N PLVLK ++ +I EKIG+VGRTGSGKS+L FRLVE S LRS+ IIPQEPVLF GTVRSN+DP QY++++ Sbjct: 1037 RELKRLDNITQSPFLSHITSSIQGLATIHAYNKGQEFLHRYQELLDDNQAPFFLFTCAMRWLAVRLDLI-SIALITTTGLMIVLMHGQIPPAYAGLAISYAVQLTGLFQFTVRLASETEARFTSVERINHYIKTLSLEAPARIKNKAPSPDWPQEGEVTFENAEMRYRENLPLVLKKVSFTIKPKEKIGIVGRTGSGKSSLGMALFRLVELSGGCIKIDGVRISDIGLADLRSKLSIIPQEPVLFSGTVRSNLDPFNQYTEDQ 1298
BLAST of CF836429 vs. ExPASy Swiss-Prot
Match: YH85_SCHPO (Uncharacterized ABC transporter ATP-binding protein/permease C359.05 OS=Schizosaccharomyces pombe GN=SPBC359.05 PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 4.754e-40 Identity = 96/264 (36.36%), Postives = 135/264 (51.14%), Query Frame = -3 Query: 3 SRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFT-FCLATLFMILLPSSIIKPEXXXXXXXXXXXXXXXLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEE 791 SREL RLD++T++P+ H ES+SG+ TIRA+G Q TF +EN R++ N R+ F S+ W R+E +G FC A ++ P L + + S EN VSVERI ++ + SEA + + PP WP G V +YR + L I + I EKIG+VGRTG+GKSTL FR++EP+ LRSR IIPQE +FEG +R N+DP + +D++ Sbjct: 1068 SRELKRLDNVTRSPLYAHVQESLSGLSTIRAYGMQETFVEENDLRIDTNHRVWFMFFSSSRWQAIRVECIGDLIIFCTAFYGILSAIKGSPNPGLVGFSLSYAIQITQGLSFIVQQSVDAENNTVSVERILEYINVKSEAPEIIPENRPPCEWPTDGAVSFNHYSAKYREDLSFALNNINIEISPREKIGIVGRTGAGKSTLAMALFRIIEPTEGKIEIDNEDITKFGLYDLRSRLSIIPQESQIFEGNIRENLDPNHRLTDKK 1331
BLAST of CF836429 vs. ExPASy Swiss-Prot
Match: MRP5_RAT (Multidrug resistance-associated protein 5 OS=Rattus norvegicus GN=Abcc5 PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.383e-39 Identity = 99/263 (37.64%), Postives = 139/263 (52.85%), Query Frame = -3 Query: 3 RELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMILLPSSIIKPEXXXXXXXXXXXXXXXLFWAIYMSCFVENRMVSVERIKQFTEIPS-EAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEE 788 REL RLD+IT++P + H + SI G+ TI A+ K+ F ++ N F + WL RL+L+ S T MI+L I + + ++ E R SVERI + + S EA +++++ PP +WP G + + ++RYR N PLVLK ++ +I EKIG+VGRTGSGKS+L FRLVE S LRS+ IIPQEPVLF GTVRSN+DP QY++E+ Sbjct: 1036 RELKRLDNITQSPFLSHITSSIQGLATIHAYNKRQEFLHRYQELLDDNQAPFFLFTCAMRWLAVRLDLI-SIALITTTGLMIVLMHGQIPSAYAGLAISYAVQLTGLFQFTVRLASETEARFTSVERINHYIKTLSLEAPARIKNKAPPHDWPQEGEITFENAEMRYRENLPLVLKKVSFTIKPKEKIGIVGRTGSGKSSLGMALFRLVELSGGCIKIDGVRISDIGLADLRSKLTIIPQEPVLFSGTVRSNLDPFNQYTEEQ 1297
BLAST of CF836429 vs. ExPASy Swiss-Prot
Match: NFT1_YEAST (ABC transporter NFT1 OS=Saccharomyces cerevisiae GN=NFT1 PE=1 SV=2) HSP 1 Score: 157.532 bits (397), Expect = 7.590e-38 Identity = 88/261 (33.72%), Postives = 144/261 (55.17%), Query Frame = -3 Query: 9 SRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMILLPSSIIKPEXXXXXXXXXXXXXXXLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSD 791 SREL R+D+I +P+ F+E+I GV TIRA + F +++ ++ + F+ N + EW+ +R++++G+ +++ MI++ +S + W I + VE M SVERIK++T+IPSE+ + PP NWP G+V+L +L +RY ++ L ++ + G K+G+VGRTG+GKS++I +RL + LR+ IPQ+P LF+GTVRSN+DP +YSD Sbjct: 1132 SRELKRIDNINISPIHQLFAEAIKGVTTIRALADERRFITQSLVAIDRSNAPFFYLNMATEWITYRVDIIGTLVLFSSSV-MIIMKASYLDAGLAGILLSNAFSFTETAQWIIKVFSSVELLMSSVERIKEYTDIPSESNGYIS---PPANWPQTGDVELKNLSLRYSPHSSKALDNVSFKVKAGTKVGIVGRTGAGKSSIIAAIYRLSDWENGTITIDNKDIKHIPLERLRNSISCIPQDPTLFDGTVRSNLDPFDRYSD 1388
BLAST of CF836429 vs. ExPASy Swiss-Prot
Match: MRP5_MOUSE (Multidrug resistance-associated protein 5 OS=Mus musculus GN=Abcc5 PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 7.590e-38 Identity = 96/263 (36.50%), Postives = 139/263 (52.85%), Query Frame = -3 Query: 3 RELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMILLPSSIIKPEXXXXXXXXXXXXXXXLFWAIYMSCFVENRMVSVERIKQFTEIPS-EAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEE 788 REL RLD+IT++P + H + SI G+ TI A+ K+ F ++ N F + WL RL+++ S +T MI+ + + + ++ E R SVERI + + S EA +++++ PP +WP G V + ++RYR N PLVLK ++ +I EKIG+VGRTGSGKS+L FRLVE S LRS+ IIPQEPVLF GTVRSN+DP QY++++ Sbjct: 1036 RELKRLDNITQSPFLSHITSSIQGLATIHAYNKRQEFLHRYQELLDDNQAPFFLFTCAMRWLPVRLDII-SIALITSTGLMIVSGMARSLSAYAGLAISYAVQLIGLFQFTVRLASETEARFTSVERINHYIKTLSLEAPARIKNKAPPHDWPQEGEVTFENAEMRYRENLPLVLKKVSFTIKPKEKIGIVGRTGSGKSSLGMALFRLVELSGGCIKIDGIRISDIGLADLRSKLAIIPQEPVLFSGTVRSNLDPFNQYTEDQ 1297
BLAST of CF836429 vs. ExPASy Swiss-Prot
Match: AB12C_ARATH (ABC transporter C family member 12 OS=Arabidopsis thaliana GN=ABCC12 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 7.590e-38 Identity = 90/265 (33.96%), Postives = 133/265 (50.19%), Query Frame = -3 Query: 9 SRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMILLPSSIIKP----EXXXXXXXXXXXXXXXLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSD 791 SRE+ RLDS+T++P+ F E+++G+ +IRA+ + N ++ N+R N SN WL RLE LG L F +L + L + + EN + SVER+ + ++PSEA +E+ P WP+ G++ D+ +RYR P VL G+T + EK+GVVGRTG+GKS+++ FR+VE +R IIPQ PVLF GTVR NIDP +++D Sbjct: 1074 SREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYDRMAKINGKSMDNNIRFTLANTSSNRWLTIRLETLGGVMIWLTATFAVLQNGNTNNQAGFASTMGLLLSYTLNITSLLSGVLRQASRAENSLNSVERVGNYIDLPSEATDIIENNRPVCGWPSGGSIKFEDVHLRYRPGLPPVLHGLTFFVSPSEKVGVVGRTGAGKSSMLNALFRIVEVEKGRIMIDDCDVAKFGLTDVRRVLSIIPQSPVLFSGTVRFNIDPFSEHND 1338 The following BLAST results are available for this feature:
BLAST of CF836429 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 114
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836429 ID=CF836429; Name=CF836429; organism=Citrus sinensis; type=EST; length=793bpback to top |