CF836429

Overview
NameCF836429
Unique NameCF836429
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11050 contig Csv1_Contig11050:216..1008. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF836429 vs. ExPASy Swiss-Prot
Match: ABCC5_DICDI (ABC transporter C family member 5 OS=Dictyostelium discoideum GN=abcC5 PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.208e-37
Identity = 95/270 (35.19%), Postives = 143/270 (52.96%), Query Frame = -3
Query:    3 SRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMILLPSSIIKPEXXXXXXXXXXXXXXXLFWAIYMSCFVENRMVSVERIKQFTE-IPSEAAWKMEDRLPPPNWPAHGN------VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEE 791
            S ++ R++SIT++P+  HF+E+++GV+T+RAF K      +N   ++ N +        N+WLG RL +LG+    L+ +F+ +  SSI                      A      +E +M S+ERI  +TE +P E    +E   PP  WP+  N      +   ++ + YR   P VLKGI+  I  GEKIG+ GRTGSGKS+L+   FR+VE S                  LRS+  IIPQEPV+F GT+RSN+D + +++D E
Sbjct: 1047 SIQIQRIESITRSPIFSHFAETLNGVITLRAFRKMGENVLKNQALLDDNNKCYLTLQAMNQWLGLRLSVLGNLITLLSCIFITVDRSSIAIASVGLSISYTLSLTTNLNK-ATQQLAELETKMNSIERISYYTENVPQEPDQIIESNRPPMGWPSLTNSNHTPPIIFENVVMSYRQGLPAVLKGISFEIKAGEKIGICGRTGSGKSSLLLALFRIVELSSGRIIIDGLDISKIGLKDLRSQLAIIPQEPVMFTGTLRSNLDSLSEHTDSE 1315          
BLAST of CF836429 vs. ExPASy Swiss-Prot
Match: ABCC7_DICDI (ABC transporter C family member 7 OS=Dictyostelium discoideum GN=abcC7 PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.884e-37
Identity = 90/268 (33.58%), Postives = 141/268 (52.61%), Query Frame = -3
Query:    3 SRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMILLPSSIIKPEXXXXXXXXXXXXXXXLFWAIYMSCFVENRMVSVERIKQFTEIPSE-----AAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEE 791
            S EL RL++I+++P+    SES +G++TIR+F +Q+ F +   + +N NLR+ ++N  ++ W+G ++E++ S    L+  F +   ++ +                  L W I        +M SVERI+ +   P E        ++E  L P NWP  G +   +++++YR N    LK I+  I   EKIG+VG++GSGKST +   FR++E S                  LR+  GI PQEP +F GT+R NIDP G YSD E
Sbjct:  926 SLELKRLENISRSPIFSILSESFNGLITIRSFRQQSRFIKRMQDSINVNLRLFYYNFSAHRWIGIKIEIISSAAVFLSAFFSLFNSNTGLS----VLAVTTSLSLTGYLNWCIRQYIEFSMKMSSVERIENYINQPREGDTMNVDMELESNL-PINWPQKGEIQFKNVEIKYRPNLKPSLKNISFDIKSNEKIGIVGKSGSGKSTTMLALFRMIECSKGSIHIDGIDISKISLSKLRNSIGICPQEPFIFSGTIRKNIDPFGIYSDSE 1188          
BLAST of CF836429 vs. ExPASy Swiss-Prot
Match: ABCC9_DICDI (ABC transporter C family member 9 OS=Dictyostelium discoideum GN=abcC9 PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.767e-37
Identity = 98/270 (36.30%), Postives = 136/270 (50.37%), Query Frame = -3
Query:    6 RELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMILLPSSIIKPEXXXXXXXXXXXXXXXLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWK---------MEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDE 788
            REL R  SI+++P+I   SE  +G+ TIRAF +Q+ F     + ++ NL+ +F +     W+  RLELL S    + +LF +   +                     L  A      +E +M S ER+  + ++PSE +            +D L   NWP  GN+   ++QV Y SN+   LK IT S+   EKIG+VGRTG+GKST+    FRLVE S                  LR   GI+PQEP LF GT+RSNIDP+ QY DE
Sbjct:  943 RELNRCKSISQSPIISFLSECCNGLSTIRAFKQQSRFIGIMNDNIDKNLKCEFASFAVEMWISIRLELLSSIIVFIVSLFSLF--NGYSNSALSILSVSTARSITSYLKSACRQMVDLERKMNSFERVNNYIKLPSEGSGSGVKSMEFISEKDLL---NWPEKGNIQFNNVQVNYNSNSVPSLKDITFSVESNEKIGIVGRTGAGKSTIANCLFRLVECSKGSILIDGIDIKTIDLNKLRGSLGIVPQEPWLFSGTIRSNIDPLNQYDDE 1207          
BLAST of CF836429 vs. ExPASy Swiss-Prot
Match: AB11C_ARATH (ABC transporter C family member 11 OS=Arabidopsis thaliana GN=ABCC11 PE=2 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 6.425e-37
Identity = 87/267 (32.58%), Postives = 135/267 (50.56%), Query Frame = -3
Query:    3 SRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMIL----LPSSIIKPEXXXXXXXXXXXXXXXLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEE 791
            SRE+ RLDS+T++P+   F E+++G+ +IRA+       + N   ++ N+R    +  SN WL  R E LG     L   F +L      +  +                  L   +  +   EN + SVER+  + ++PSEA   +E+  P   WP+ G++   D+ +RYR   P VL G++  ++  EK+GVVGRTG+GKS+++   +R+VE                    LR    IIPQ PVLF GTVR NIDP  +++D +
Sbjct: 1074 SREVRRLDSVTRSPIYALFGEALNGLSSIRAYKAYDRMAKINGKSMDNNIRFTLASTSSNRWLTIRSESLGGVMIWLTATFAVLRYGNAENQAVFASTMGLLLSYTLNITTLLSGVLRQASKAENSLNSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIQFEDVHLRYRPGLPPVLHGLSFFVYPSEKVGVVGRTGAGKSSMLNALYRIVELEKGRILIDDYDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFSEHNDAD 1340          
BLAST of CF836429 vs. ExPASy Swiss-Prot
Match: MRP6_HUMAN (Multidrug resistance-associated protein 6 OS=Homo sapiens GN=ABCC6 PE=1 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 1.870e-36
Identity = 89/263 (33.84%), Postives = 135/263 (51.33%), Query Frame = -3
Query:    6 SRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGS-FTFCLATLFMILLPSSIIKPEXXXXXXXXXXXXXXXLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDE 791
            S +L RL+S + + V  H +E+  G   +RAF  Q  F  +N  RV+ + R+ F    ++ WL   +ELLG+   F  AT    +L  + +                  L W +     +EN +VSVER++ +   P EA W++      P WP  G ++  D  +RYR   PL ++G++  IH GEK+G+VGRTG+GKS+L     RL E +                  LRSR  IIPQ+P+LF G++R N+D + ++SDE
Sbjct: 1109 SCQLRRLESASYSSVCSHMAETFQGSTVVRAFRTQAPFVAQNNARVDESQRISFPRLVADRWLAANVELLGNGLVFAAATC--AVLSKAHLSAGLVGFSVSAALQVTQTLQWVVRNWTDLENSIVSVERMQDYAWTPKEAPWRLPTCAAQPPWPQGGQIEFRDFGLRYRPELPLAVQGVSFKIHAGEKVGIVGRTGAGKSSLASGLLRLQEAAEGGIWIDGVPIAHVGLHTLRSRISIIPQDPILFPGSLRMNLDLLQEHSDE 1369          
BLAST of CF836429 vs. ExPASy Swiss-Prot
Match: ABCCF_DICDI (ABC transporter C family member 15 OS=Dictyostelium discoideum GN=abcC15 PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.870e-36
Identity = 84/262 (32.06%), Postives = 141/262 (53.82%), Query Frame = -3
Query:    3 ELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMILLPSSIIKPEXXXXXXXXXXXXXXXLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPP-NWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEE 785
            EL R+ SI+++PV    SE  +G+ TIR+FG+Q  F+    + +N NLR+ F+N   + W+G R+E L +    ++ LF I   +    P                L W +     +E+R+ SVER++ +  IP E     ++ +     WP+ G ++  ++++RYR N+   L+  ++ I+  E+IG++GR+GSGKST+    FR++E S                  LRS  GI+PQ+P +F G++R N+DP  Q++D E
Sbjct: 1041 ELKRIQSISRSPVYSLLSEVYNGLTTIRSFGQQERFFNMMKDNININLRVFFYNFAVSRWIGIRVEFLSAIVVLMSALFSIFNDN----PGLSALGVTTALGITFNLNWFMRQFGELESRINSVERVQSYISIPKEKETNEDEFIQTGFIWPSRGEIEFKNVEIRYRPNSIATLRNFSMKINAQERIGIIGRSGSGKSTIGMSLFRMIECSSGSILIDGDDISQIDLKRLRSSIGIVPQDPFIFSGSIRLNLDPFDQFTDNE 1298          
BLAST of CF836429 vs. ExPASy Swiss-Prot
Match: MRP6_MOUSE (Multidrug resistance-associated protein 6 OS=Mus musculus GN=Abcc6 PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.442e-36
Identity = 89/263 (33.84%), Postives = 137/263 (52.09%), Query Frame = -3
Query:    6 SRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGS-FTFCLATLFMILLPSSIIKPEXXXXXXXXXXXXXXXLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDE 791
            S +L RL+S   + V  H +E+  G + +RAF  Q +F  ++   ++ N R+ F    ++ WL   LELLG+   F  AT    +L  + +                  L W +     +EN MV+VER++ +  IP EA W++      P WP  G ++  D  +R+R   PL ++G++L IH GEK+G+VGRTG+GKS+L     RL E +                  LRSR  IIPQ+PVLF G++R N+D + +++DE
Sbjct: 1104 SCQLRRLESARYSSVCSHMAETFQGSLVVRAFRAQASFTAQHDALMDENQRVSFPKLVADRWLATNLELLGNGLVFVAATC--AVLSKAHLSAGLVGFSVSAALQVTQTLQWVVRSWTDLENSMVAVERVQDYARIPKEAPWRLPTCAAQPLWPCGGQIEFRDFGLRHRPELPLAVQGVSLKIHAGEKVGIVGRTGAGKSSLAWGLLRLQEAAEGNIWIDGVPITHVGLHTLRSRITIIPQDPVLFPGSLRMNLDLLQEHTDE 1364          
BLAST of CF836429 vs. ExPASy Swiss-Prot
Match: BPT1_YEAST (Bile pigment transporter 1 OS=Saccharomyces cerevisiae GN=BPT1 PE=1 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 2.442e-36
Identity = 90/266 (33.83%), Postives = 136/266 (51.13%), Query Frame = -3
Query:    3 SRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMILLPSSI---IKPEXXXXXXXXXXXXXXXLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEE 791
            SREL RL SI+ +P++   SES++G   I A+     F   N  ++  N+   F+   +N WL  RL+ +G+ T  LAT  + L   +    +                  L W +  +  +E  +VSVERI ++ E+P EA     ++ P  NWP+ G ++  +   +YR N   VL  I + I   EK+G+VGRTG+GKSTL    FR++EP+                  LRS   IIPQ+   FEGTV++N+DP  +YS++E
Sbjct: 1143 SRELKRLISISYSPIMSLMSESLNGYSIIDAYDHFERFIYLNYEKIQYNVDFVFNFRSTNRWLSVRLQTIGA-TIVLATAILALATMNTKRQLSSGMVGLLMSYSLEVTGSLTWIVRTTVTIETNIVSVERIVEYCELPPEAQSINPEKRPDENWPSKGGIEFKNYSTKYRENLDPVLNNINVKIEPCEKVGIVGRTGAGKSTLSLALFRILEPTEGKIIIDGIDISDIGLFDLRSHLAIIPQDAQAFEGTVKTNLDPFNRYSEDE 1407          
BLAST of CF836429 vs. ExPASy Swiss-Prot
Match: MRP4_HUMAN (Multidrug resistance-associated protein 4 OS=Homo sapiens GN=ABCC4 PE=1 SV=3)

HSP 1 Score: 151.754 bits (382), Expect = 4.165e-36
Identity = 94/269 (34.94%), Postives = 136/269 (50.56%), Query Frame = -3
Query:    3 SRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNG------SNEWLGFRLELLGSFTFCLATLFMILLPSSIIKPEXXXXXXXXXXXXXXXLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEE 791
            SR++ RL+S T++PV  H S S+ G+ TIRA+ K     QE  +        D H+        ++ W   RL+ + +  F +   F  L+ +  +                    W +  S  VEN M+SVER+ ++T++  EA W+ + R PPP WP  G +   ++   Y    PLVLK +T  I   EK+G+VGRTG+GKS+LI   FRL EP                   LR +  IIPQEPVLF GT+R N+DP  +++DEE
Sbjct:  886 SRDVKRLESTTRSPVFSHLSSSLQGLWTIRAY-KAEERCQELFDA-----HQDLHSEAWFLFLTTSRWFAVRLDAICAM-FVIIVAFGSLILAKTLDAGQVGLALSYALTLMGMFQWCVRQSAEVENMMISVERVIEYTDLEKEAPWEYQKR-PPPAWPHEGVIIFDNVNFMYSPGGPLVLKHLTALIKSQEKVGIVGRTGAGKSSLISALFRLSEPE-GKIWIDKILTTEIGLHDLRKKMSIIPQEPVLFTGTMRKNLDPFNEHTDEE 1145          
BLAST of CF836429 vs. ExPASy Swiss-Prot
Match: MRP6_RAT (Multidrug resistance-associated protein 6 OS=Rattus norvegicus GN=Abcc6 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 7.855e-35
Identity = 86/261 (32.95%), Postives = 133/261 (50.96%), Query Frame = -3
Query:    6 ELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGS-FTFCLATLFMILLPSSIIKPEXXXXXXXXXXXXXXXLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDE 785
            +L RL+S + + V  H +E+  G   +RAF  Q  F  ++   ++ N R+ F    ++ WL   LELLG+   F  AT    +L  + +                  L W +     +EN MV+VER++ +   P EA W++      P WP  G ++  D  +R+R   P+ ++G++L IH GEK+G+VGRTG+GKS+L     RL E +                  LRSR  IIPQ+PVLF G++R N+D + + +DE
Sbjct: 1110 QLRRLESASYSSVCSHLAETFQGSQVVRAFQAQGPFTAQHDALMDENQRISFPRLVADRWLAANLELLGNGLVFVAATC--AVLSKAHLSAGLAGFSVSAALQVTQTLQWVVRSWTDLENSMVAVERVQDYVHTPKEAPWRLPSSAAQPLWPCGGQIEFRDFGLRHRPELPMAVQGVSLKIHAGEKVGIVGRTGAGKSSLTWGLLRLQEATEGGIWIDGVPITDMGLHTLRSRITIIPQDPVLFPGSLRMNLDLLQENTDE 1368          
The following BLAST results are available for this feature:
BLAST of CF836429 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
ABCC5_DICDI2.208e-3735.19ABC transporter C family member 5 OS=Dictyostelium... [more]
ABCC7_DICDI2.884e-3733.58ABC transporter C family member 7 OS=Dictyostelium... [more]
ABCC9_DICDI3.767e-3736.30ABC transporter C family member 9 OS=Dictyostelium... [more]
AB11C_ARATH6.425e-3732.58ABC transporter C family member 11 OS=Arabidopsis ... [more]
MRP6_HUMAN1.870e-3633.84Multidrug resistance-associated protein 6 OS=Homo ... [more]
ABCCF_DICDI1.870e-3632.06ABC transporter C family member 15 OS=Dictyosteliu... [more]
MRP6_MOUSE2.442e-3633.84Multidrug resistance-associated protein 6 OS=Mus m... [more]
BPT1_YEAST2.442e-3633.83Bile pigment transporter 1 OS=Saccharomyces cerevi... [more]
MRP4_HUMAN4.165e-3634.94Multidrug resistance-associated protein 4 OS=Homo ... [more]
MRP6_RAT7.855e-3532.95Multidrug resistance-associated protein 6 OS=Rattu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02P06_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02P06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836429 ID=CF836429; Name=CF836429; organism=Citrus sinensis; type=EST; length=793bp
ATTTCTTCATCTGAATACTGACCAATTGGATCAATGTTGCTTCTCACAGT
TCCTTCAAAAAGGACAGGTTCTTGAGGAATGATCCCAAAGCGAGACCTTA
GGTCATGAAGCCCCAACAATGAAATGTCGATTCCATCAATAATGATTCTC
CCTCCTGAAGGCTCCACCAGCCTAAAGAAAACTTGAATTAAAGTTGACTT
CCCACTTCCTGTACGCCCAACTACACCAATCTTCTCTCCCCCGTGAATGC
TGAGTGTAATACCTTTGAGAACCAGAGGAGTGTTGGAGCGATATCTGACC
TGCAAGTCTATGAGGTCCACATTGCCATGAGCAGGCCAATTTGGAGGTGG
AAGACGATCTTCCATCTTCCATGCTGCTTCTGAAGGAATTTCTGTAAACT
GCTTTATCCTTTCAACAGAGACCATCCGGTTTTCCACAAAGCAACTCATG
TATATGGCCCAGAATAGCACACCATTGAGGGACAACCCATATGAGAGTGA
CAAACCAACATTCTCTGGTTTTATGATACTGCTGGGTAACAGGATCATAA
ACAAAGTGGCGAGGCAGAAAGTAAAACTCCCAAGTAGCTCCAGACGGAAA
CCCAACCACTCATTGGACCCATTGTTGTGGAAATCCATGCGCAAATTGCC
ATTAACTCTATTAACATTTTCCTGATAAAATGTAGTTTGCTTTCCAAAAG
CACGGATTGTCATAACACCAGATATGCTTTCTGAAAAATGATGAATGACA
GGTGCTTTGGTGATTGAGTCAAGGCGTGTTAATTCTCTTGATG
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