CF836429
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF836429 vs. ExPASy Swiss-Prot
Match: CFTR_MICMU (Cystic fibrosis transmembrane conductance regulator OS=Microcebus murinus GN=CFTR PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.939e-25 Identity = 80/282 (28.37%), Postives = 127/282 (45.04%), Query Frame = -3 Query: 3 SRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMILLPSSIIKPEXXXXXXXXXXXXXXXLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPN-------------------WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEE 791 S++L +L+S ++P+ H S+ G+ T+RAFG+Q F +N + F + W R+E++ F + T IL L WA+ S V++ M SV R+ +F ++P+E P + WP+ G + + DL RY +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ + R FG+IPQ+ +F GT R N+DP Q+SD+E Sbjct: 1037 SQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYFETLFHKALNLHTANWFLYLSTLRWFQMRIEMVFVIFFIVVTFISILTTGE--GEGQVGIILTLAMNIMGTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEEGKSTRSIKPSKDCHLSKVMVFENPHVKKDDIWPSGGQMTVKDLTARYLDGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQE 1315
BLAST of CF836429 vs. ExPASy Swiss-Prot
Match: CFTR_COLGU (Cystic fibrosis transmembrane conductance regulator OS=Colobus guereza GN=CFTR PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.939e-25 Identity = 80/282 (28.37%), Postives = 126/282 (44.68%), Query Frame = -3 Query: 3 SRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMILLPSSIIKPEXXXXXXXXXXXXXXXLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPN-------------------WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEE 791 S++L +L+S ++P+ H S+ G+ T+RAFG+Q F +N + F + W R+E++ F T IL L WA+ S V++ M SV R+ +F ++P+E P N WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ + R FG+IPQ+ +F GT R N+DP Q+SD+E Sbjct: 1037 SQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYFETLFHKALNLHTANWFLYLSTLRWFQMRIEMIFVIFFIAVTFISILTTGE--GEGTVGIILTLAMNIMSTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEEGKPTRSTKPYKNGQLLKVMIIENSHVKKDDIWPSGGQMTIKDLTAKYTEGGNPILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TKGEIQIDGVSWDSVTLQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQE 1315
BLAST of CF836429 vs. ExPASy Swiss-Prot
Match: CFTR_BOVIN (Cystic fibrosis transmembrane conductance regulator OS=Bos taurus GN=CFTR PE=2 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 1.939e-25 Identity = 80/282 (28.37%), Postives = 127/282 (45.04%), Query Frame = -3 Query: 3 SRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMILLPSSIIKPEXXXXXXXXXXXXXXXLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPN-------------------WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEE 791 S++L +L+S ++P+ H S+ G+ T+RAFG+Q F +N + F + W R+E++ F T IL L WA+ S V++ M SV R+ +F ++P+E P + WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ + R FG+IPQ+ +F GT R N+DP GQ+SD+E Sbjct: 1037 SQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYFETLFHKALNLHTANWFLYLSTLRWFQMRIEMIFVIFFIAVTFISILTTGE--GEGRVGIILTLAMNIMGTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEDGKPNNSFRPSKDSQPSKVMIIENQHVKKDDIWPSGGQMTVKDLTAKYTDGGNAILENISFSISPGQRVGLLGRTGSGKSTLLLAFLRLLN-TKGEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFSGTFRKNLDPYGQWSDQE 1315
BLAST of CF836429 vs. ExPASy Swiss-Prot
Match: CFTR_PAPAN (Cystic fibrosis transmembrane conductance regulator OS=Papio anubis GN=CFTR PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.533e-25 Identity = 80/282 (28.37%), Postives = 126/282 (44.68%), Query Frame = -3 Query: 3 SRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMILLPSSIIKPEXXXXXXXXXXXXXXXLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPN-------------------WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEE 791 S++L +L+S ++P+ H S+ G+ T+RAFG+Q F +N + F + W R+E++ F T IL L WA+ S V++ M SV R+ +F ++P+E P N WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ + R FG+IPQ+ +F GT R N+DP Q+SD+E Sbjct: 1037 SQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYFETLFHKALNLHTANWFLYLSTLRWFQMRIEMIFVIFFIAVTFISILTTGE--GEGTVGIILTLAMNIMSTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEEGKPTRSTKPYKNGQLSKVMVIENSHVKKDDIWPSGGQMTVKDLTAKYTEGGNPILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQE 1315
BLAST of CF836429 vs. ExPASy Swiss-Prot
Match: CFTR_MACNE (Cystic fibrosis transmembrane conductance regulator OS=Macaca nemestrina GN=CFTR PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.533e-25 Identity = 80/282 (28.37%), Postives = 126/282 (44.68%), Query Frame = -3 Query: 3 SRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMILLPSSIIKPEXXXXXXXXXXXXXXXLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPN-------------------WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEE 791 S++L +L+S ++P+ H S+ G+ T+RAFG+Q F +N + F + W R+E++ F T IL L WA+ S V++ M SV R+ +F ++P+E P N WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ + R FG+IPQ+ +F GT R N+DP Q+SD+E Sbjct: 1037 SQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYFETLFHKALNLHTANWFLYLSTLRWFQMRIEMIFVIFFIAVTFISILTTGE--GEGTVGIILTLAMNIMSTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEEGKPTRSTKPYKNGQLSKVMVIENSHVKKDDIWPSGGQMTVKDLTAKYTEGGNPILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQE 1315
BLAST of CF836429 vs. ExPASy Swiss-Prot
Match: CFTR_MACMU (Cystic fibrosis transmembrane conductance regulator OS=Macaca mulatta GN=CFTR PE=2 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 2.533e-25 Identity = 80/282 (28.37%), Postives = 126/282 (44.68%), Query Frame = -3 Query: 3 SRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMILLPSSIIKPEXXXXXXXXXXXXXXXLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPN-------------------WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEE 791 S++L +L+S ++P+ H S+ G+ T+RAFG+Q F +N + F + W R+E++ F T IL L WA+ S V++ M SV R+ +F ++P+E P N WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ + R FG+IPQ+ +F GT R N+DP Q+SD+E Sbjct: 1037 SQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYFETLFHKALNLHTANWFLYLSTLRWFQMRIEMIFVIFFIAVTFISILTTGE--GEGTVGIILTLAMNIMSTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEEGKPTRSTKPYKNGQLSKVMVIENSHVKKDDIWPSGGQMTVKDLTAKYTEGGNPILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQE 1315
BLAST of CF836429 vs. ExPASy Swiss-Prot
Match: CFTR_MACFU (Cystic fibrosis transmembrane conductance regulator OS=Macaca fuscata fuscata GN=CFTR PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.533e-25 Identity = 80/282 (28.37%), Postives = 126/282 (44.68%), Query Frame = -3 Query: 3 SRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMILLPSSIIKPEXXXXXXXXXXXXXXXLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPN-------------------WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEE 791 S++L +L+S ++P+ H S+ G+ T+RAFG+Q F +N + F + W R+E++ F T IL L WA+ S V++ M SV R+ +F ++P+E P N WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ + R FG+IPQ+ +F GT R N+DP Q+SD+E Sbjct: 1037 SQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYFETLFHKALNLHTANWFLYLSTLRWFQMRIEMIFVIFFIAVTFISILTTGE--GEGTVGIILTLAMNIMSTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEEGKPTRSTKPYKNGQLSKVMVIENSHVKKDDIWPSGGQMTVKDLTAKYTEGGNPILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQE 1315
BLAST of CF836429 vs. ExPASy Swiss-Prot
Match: CFTR_MACFA (Cystic fibrosis transmembrane conductance regulator OS=Macaca fascicularis GN=CFTR PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.533e-25 Identity = 80/282 (28.37%), Postives = 126/282 (44.68%), Query Frame = -3 Query: 3 SRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMILLPSSIIKPEXXXXXXXXXXXXXXXLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPN-------------------WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEE 791 S++L +L+S ++P+ H S+ G+ T+RAFG+Q F +N + F + W R+E++ F T IL L WA+ S V++ M SV R+ +F ++P+E P N WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ + R FG+IPQ+ +F GT R N+DP Q+SD+E Sbjct: 1037 SQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYFETLFHKALNLHTANWFLYLSTLRWFQMRIEMIFVIFFIAVTFISILTTGE--GEGTVGIILTLAMNIMSTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEEGKPTRSTKPYKNGQLSKVMVIENSHVKKDDIWPSGGQMTVKDLTAKYTEGGNPILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQE 1315
BLAST of CF836429 vs. ExPASy Swiss-Prot
Match: CFTR_CERAE (Cystic fibrosis transmembrane conductance regulator OS=Cercopithecus aethiops GN=CFTR PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.533e-25 Identity = 80/282 (28.37%), Postives = 126/282 (44.68%), Query Frame = -3 Query: 3 SRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMILLPSSIIKPEXXXXXXXXXXXXXXXLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPN-------------------WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEE 791 S++L +L+S ++P+ H S+ G+ T+RAFG+Q F +N + F + W R+E++ F T IL L WA+ S V++ M SV R+ +F ++P+E P N WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ + R FG+IPQ+ +F GT R N+DP Q+SD+E Sbjct: 1037 SQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYFETLFHKALNLHTANWFLYLSTLRWFQMRIEMIFVIFFIAVTFISILTTGE--GEGTVGIILTLAMNIMSTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEEGKPTRSTKPYKNGQLSKVMIIENSHVKKDDIWPSGGQMTVKDLTAKYTEGGNPILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQE 1315
BLAST of CF836429 vs. ExPASy Swiss-Prot
Match: CFTR_MUNRE (Cystic fibrosis transmembrane conductance regulator OS=Muntiacus reevesi GN=CFTR PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.308e-25 Identity = 80/282 (28.37%), Postives = 127/282 (45.04%), Query Frame = -3 Query: 3 SRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMILLPSSIIKPEXXXXXXXXXXXXXXXLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPN-------------------WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEE 791 S++L +L+S ++P+ H S+ G+ T+RAFG+Q F +N + F + W R+E++ F T IL L WA+ S V++ M SV R+ +F ++P+E P + WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ + R FG+IPQ+ +F GT R N+DP GQ+SD+E Sbjct: 1037 SQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYFETLFHKALNLHTANWFLYLSTLRWFQMRIEMIFVIFFIAVTFISILTTGE--GEGRVGIILTLAMNIMGTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEDGKPNNSFRPSKDSQLSKVMVIENQHVKKDDIWPSGGQMTVKDLTAKYIDGGNAILENISFSISPGQRVGLLGRTGSGKSTLLLAFLRLLN-TKGEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFSGTFRKNLDPYGQWSDQE 1315 The following BLAST results are available for this feature:
BLAST of CF836429 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 114
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF836429 ID=CF836429; Name=CF836429; organism=Citrus sinensis; type=EST; length=793bpback to top |