CF836439
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836439 vs. ExPASy Swiss-Prot
Match: NACB1_YEAS7 (Nascent polypeptide-associated complex subunit beta-1 OS=Saccharomyces cerevisiae (strain YJM789) GN=EGD1 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.335e-14 Identity = 47/107 (43.93%), Postives = 62/107 (57.94%), Query Frame = -2 Query: 297 IPAIEEVNIFKEDVVIQFLNPKVQASIAA--NTWVVSGAPQTKKLQDIFPGIINQLGPDNLDTLRKLAEQFQKQAPNAGSGAPTTQEDAADEVPELVAGETFEAAAE 611 I + E N FK+D + N KV +AA NT V G PQ K LQD+FPGII+QLGP+ + L +LA Q +K + AP E + +PELV G+TF+A E Sbjct: 56 IDNVAEANFFKDDGKVMHFN-KVGVQVAAQHNTSVFYGLPQEKNLQDLFPGIISQLGPEAIQALSQLAAQMEKHE----AKAPADAEKKDEAIPELVEGQTFDADVE 157
BLAST of CF836439 vs. ExPASy Swiss-Prot
Match: BT3L3_HUMAN (Transcription factor BTF3 homolog 3 OS=Homo sapiens GN=BTF3L3 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.743e-14 Identity = 44/101 (43.56%), Postives = 64/101 (63.37%), Query Frame = -2 Query: 330 RIGVNAIPAIEEVNIF-KEDVVIQFLNPKVQASIAANTWVVSGAPQTKKLQDIFPGIINQLGPDNLDTLRKLAEQFQKQAPNAGSGAPTTQEDAADEVPEL 629 ++ VN I IE+VN+F + VI F NPK QAS+A NT+ ++G + K++ ++ P +++QLG D+L +LR+LAE KQ P G T D D VPEL Sbjct: 80 KLQVNNISGIEKVNMFTNQGTVIHFNNPKFQASLAVNTFTITGHAEAKQVTEMLPSVLSQLGADSLTSLRRLAEVLPKQ-PVDGKAPLATGGDDDDGVPEL 179
BLAST of CF836439 vs. ExPASy Swiss-Prot
Match: NACB_ASHGO (Nascent polypeptide-associated complex subunit beta OS=Ashbya gossypii GN=EGD1 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.073e-14 Identity = 46/108 (42.59%), Postives = 64/108 (59.26%), Query Frame = -2 Query: 297 IEEVNIFKED-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDIFPGIINQLGPDNLDTLRKLAEQFQKQAPNAGSGAPTTQ-----EDAADEVPELVAGETFEAAAE 602 +EE N FK+D V+ F VQ + NT V G PQ K LQD+FP II QLG +++D L +LA Q Q NA + AP T+ E +++PEL+ G++F+A E Sbjct: 58 VEEANFFKDDGSVLHFNKVGVQVAPQHNTSVFYGIPQEKSLQDLFPSIIPQLGSESIDALTQLATQLQ----NAQAAAPATEGHEAGEKKDNDIPELIEGQSFDADVE 161
BLAST of CF836439 vs. ExPASy Swiss-Prot
Match: NACB_DEBHA (Nascent polypeptide-associated complex subunit beta OS=Debaryomyces hansenii GN=EGD1 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 9.567e-13 Identity = 42/109 (38.53%), Postives = 63/109 (57.80%), Query Frame = -2 Query: 309 RIGVNAIPAIEEVNIFKED-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDIFPGIINQLGPDNLDTLRKLAEQFQK-QAPNAGSGAPTTQEDAADEVPELVAGETFE 629 ++ I IEE N FKED V+ F VQ + NT+ ++G PQ K + + P I+ QLG +NL+ LRKLAEQ Q + P +G E A +++P+L+ G+ F+ Sbjct: 46 KLKAQKIEGIEEANFFKEDGKVLHFNRVGVQGAAQHNTFALTGYPQEKDVTQLIPQILPQLGAENLEILRKLAEQIQAGKNPELNAGG---AEGAEEDIPDLIEGQKFD 151
BLAST of CF836439 vs. ExPASy Swiss-Prot
Match: NACB_KLULA (Nascent polypeptide-associated complex subunit beta OS=Kluyveromyces lactis GN=EGD1 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.249e-12 Identity = 43/104 (41.35%), Postives = 60/104 (57.69%), Query Frame = -2 Query: 297 IEEVNIFKED-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDIFPGIINQLGPDNLDTLRKLAEQFQK-QAPNAGSGAPTTQEDAADEVPELVAGETFEAAAE 602 +++ N FK+D V+ F VQ + NT V G PQ K LQ++FP II Q+G D ++ L ++A Q Q Q N + AP + D +PELV G+TFEA E Sbjct: 56 VQQANFFKDDGTVLHFNKVGVQVAPQHNTSVFYGIPQEKSLQELFPDIIPQMGADAINALTQMASQLQSAQGANQQAAAPEAEGKDID-IPELVEGQTFEADVE 158
BLAST of CF836439 vs. ExPASy Swiss-Prot
Match: NACB_YARLI (Nascent polypeptide-associated complex subunit beta OS=Yarrowia lipolytica GN=EGD1 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.131e-12 Identity = 44/115 (38.26%), Postives = 62/115 (53.91%), Query Frame = -2 Query: 297 RIGVNAIPAIEEVNIFKED-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDIFPGIINQLGPDNLDTLRKLAEQF---QKQAPNAGSGAPTTQEDAADEVPELVAGETFEAAAE 629 + I I EVN+FKED V+ F V+ S+A+NT+ +SG Q K + ++ P I+ Q+G D L L++ A QF Q+QA G +E DE+P LV E FE E Sbjct: 50 KFNAQEITGISEVNMFKEDGTVLHFPKVHVEGSVASNTFAISGPSQQKDIAELIPDILPQMGQDALLQLQQAAVQFSKLQEQAKKTAGGPDAAKEAGDDEIPNLV--ENFEDNVE 162
BLAST of CF836439 vs. ExPASy Swiss-Prot
Match: NACB_PICST (Nascent polypeptide-associated complex subunit beta OS=Pichia stipitis GN=EGD1 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.784e-12 Identity = 41/110 (37.27%), Postives = 63/110 (57.27%), Query Frame = -2 Query: 309 RIGVNAIPAIEEVNIFKED-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDIFPGIINQLGPDNLDTLRKLAEQFQ--KQAPNAGSGAPTTQEDAADEVPELVAGETFE 629 ++ I +EE N F+ED V+ F VQ + A+NT+ +G PQ K + + P I+ QLG +NL+ LR+LAEQ Q K +GAP ++ +P+L+ GE F+ Sbjct: 45 KLKATKIENVEEANFFREDGKVLHFNRVGVQGAAASNTFAFTGYPQEKNVTQLIPQILPQLGAENLEILRQLAEQLQAGKAPTELNAGAPAGGDEG---IPDLIDGEKFD 151
BLAST of CF836439 vs. ExPASy Swiss-Prot
Match: NACB_CANGA (Nascent polypeptide-associated complex subunit beta OS=Candida glabrata GN=EGD1 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.201e-12 Identity = 44/107 (41.12%), Postives = 61/107 (57.01%), Query Frame = -2 Query: 297 IPAIEEVNIFKED-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDIFPGIINQLGPDNLDTLRKLAEQFQKQAPNAGSGAPTTQEDAADE-VPELVAGETFEAAAE 611 I + E N FK+D V+ F VQ + NT V G Q K LQ++FPGII+QLG + + L +LA Q +K N +G +A DE +PELV G++F+A E Sbjct: 56 IDNVAEANFFKDDGKVLHFNKVGVQVAPQHNTSVFYGMAQEKNLQELFPGIISQLGGEAIQALSQLAAQMEKAQANENAG------EAKDEAIPELVEGQSFDAEVE 156
BLAST of CF836439 vs. ExPASy Swiss-Prot
Match: NACB_LODEL (Nascent polypeptide-associated complex subunit beta OS=Lodderomyces elongisporus GN=EGD1 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.058e-11 Identity = 41/105 (39.05%), Postives = 62/105 (59.05%), Query Frame = -2 Query: 327 RIGVNAIPAIEEVNIFKED-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDIFPGIINQLGPDNLDTLRKLAEQFQ--KQAPNAG-SGAPTTQEDAADEVPELV 629 ++ I +EE N FK+D V+ F VQ + AANT+ +G PQ K + + P I+ QLG +NL+ LR+LAEQ Q K + G +G E+A +++P+LV Sbjct: 45 KLKATKIEGVEEANFFKDDGKVLHFNRVGVQGAPAANTFAFTGYPQEKNITQLIPQILPQLGAENLEILRQLAEQIQAGKNPKDFGAAGEAGATEEANEDIPDLV 149
BLAST of CF836439 vs. ExPASy Swiss-Prot
Match: NACB_SCHPO (Nascent polypeptide-associated complex subunit beta OS=Schizosaccharomyces pombe GN=btf3 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 3.078e-11 Identity = 38/102 (37.25%), Postives = 58/102 (56.86%), Query Frame = -2 Query: 327 RIGVNAIPAIEEVNIFKEDV-VIQFLNPKVQASIAANTWVVSGAPQTKKLQDIFPGIINQLGPDNLDTLRKLAEQFQKQAPNAGSGAPTTQEDAADEVPELV 629 ++ + + I+EVN+FKED VI F P V +S+ T + G + K L +I PGI+N LGP++L LR++AEQ + G+ A E+P+LV Sbjct: 47 KLNMQNLAGIQEVNMFKEDGGVINFRAPTVHSSLPNETTAIYGKAEEKTLSEILPGILNNLGPESLTALRQMAEQLKVSEGEKGADAQADD----GEIPDLV 144 The following BLAST results are available for this feature:
BLAST of CF836439 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836439 ID=CF836439; Name=CF836439; organism=Citrus sinensis; type=EST; length=630bpback to top |