CF836440
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF836440 vs. ExPASy Swiss-Prot
Match: NACB_DICDI (Nascent polypeptide-associated complex subunit beta OS=Dictyostelium discoideum GN=nacB PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.006e-20 Identity = 62/147 (42.18%), Postives = 92/147 (62.59%), Query Frame = 3 Query: 81 VEKLMKMAGA-VLTGGNGSVRRKKKAVHNTTTT-DDHRLHSTLNRIGVNAIPAIEEVNIFK-DDVVIHFLNPKVQSSIAANTWVVSGAPQTKKLQDILPGIIGRLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELVA 512 + +L K+A V TGG GS+RRK++ H +TT+ DD +LH L +GV I A+EE N FK D +IHF NP VQ+ A+ T+V+SG +TK + I P +I +LG +NL+ ++K+A+ F A NA T D++P+LV+ Sbjct: 5 IARLNKLAEERVRTGGKGSMRRKQQVTHKSTTSVDDKKLHVKLANLGVKPIGAVEEANFFKADGNIIHFKNPSVQT--ASKTFVISGKNETKPMASI-PHVIAQLGAENLNQIKKMADAF-SAAKNANT----------DDIPDLVS 137
BLAST of CF836440 vs. ExPASy Swiss-Prot
Match: NACB1_YEAST (Nascent polypeptide-associated complex subunit beta-1 OS=Saccharomyces cerevisiae GN=EGD1 PE=1 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 2.896e-19 Identity = 59/152 (38.82%), Postives = 77/152 (50.66%), Query Frame = 3 Query: 87 KLMKMAGAVLTGGNGSVRRKKKAVHNTTTTDDHRLHSTLNRIGVNAIPAIEEVNIFKDD-VVIHFLNPKVQSSIAANTWVVSGAPQTKKLQDILPGIIGRLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELVAGETFEAAAE 539 KL K++ GG KK DD +L S L ++ I + E N FKDD V+HF VQ + NT V G PQ K LQD+ PGII +LGP+ + L +LA Q +K AP E D+ +PELV G+TF+A E Sbjct: 10 KLQKLSANNKVGGTRRKLNKKAGSSAGANKDDTKLQSQLAKLHAVTIDNVAEANFFKDDGKVMHFNKVGVQVAAQHNTSVFYGLPQEKNLQDLFPGIISQLGPEAIQALSQLAAQMEKHEAK----APADAEKKDEAIPELVEGQTFDADVE 157
BLAST of CF836440 vs. ExPASy Swiss-Prot
Match: NACB1_YEAS7 (Nascent polypeptide-associated complex subunit beta-1 OS=Saccharomyces cerevisiae (strain YJM789) GN=EGD1 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.896e-19 Identity = 59/152 (38.82%), Postives = 77/152 (50.66%), Query Frame = 3 Query: 87 KLMKMAGAVLTGGNGSVRRKKKAVHNTTTTDDHRLHSTLNRIGVNAIPAIEEVNIFKDD-VVIHFLNPKVQSSIAANTWVVSGAPQTKKLQDILPGIIGRLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELVAGETFEAAAE 539 KL K++ GG KK DD +L S L ++ I + E N FKDD V+HF VQ + NT V G PQ K LQD+ PGII +LGP+ + L +LA Q +K AP E D+ +PELV G+TF+A E Sbjct: 10 KLQKLSANNKVGGTRRKLNKKAGSSAGANKDDTKLQSQLAKLHAVTIDNVAEANFFKDDGKVMHFNKVGVQVAAQHNTSVFYGLPQEKNLQDLFPGIISQLGPEAIQALSQLAAQMEKHEAK----APADAEKKDEAIPELVEGQTFDADVE 157
BLAST of CF836440 vs. ExPASy Swiss-Prot
Match: NACB_YARLI (Nascent polypeptide-associated complex subunit beta OS=Yarrowia lipolytica GN=EGD1 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.940e-19 Identity = 59/155 (38.06%), Postives = 87/155 (56.13%), Query Frame = 3 Query: 90 LMKMAGAVLTGGNGSVRRK-KKAVHNTTTTDDHRLHSTLNRIGVNAIPAIEEVNIFKDD-VVIHFLNPKVQSSIAANTWVVSGAPQTKKLQDILPGIIGRLGPDNLDNLRKLAEQF---QKQAPNAGTGAPTTQEDDDDEVPELVAGETFEAAAE 539 L K +GA +GG G+ RR KK + D+ +L +TL + I I EVN+FK+D V+HF V+ S+A+NT+ +SG Q K + +++P I+ ++G D L L++ A QF Q+QA G +E DDE+P LV E FE E Sbjct: 11 LQKKSGAQ-SGGKGTPRRPGKKVAGRNISEDEKKLSATLKKFNAQEITGISEVNMFKEDGTVLHFPKVHVEGSVASNTFAISGPSQQKDIAELIPDILPQMGQDALLQLQQAAVQFSKLQEQAKKTAGGPDAAKEAGDDEIPNLV--ENFEDNVE 162
BLAST of CF836440 vs. ExPASy Swiss-Prot
Match: NACB_ASHGO (Nascent polypeptide-associated complex subunit beta OS=Ashbya gossypii GN=EGD1 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.427e-19 Identity = 61/160 (38.12%), Postives = 86/160 (53.75%), Query Frame = 3 Query: 84 EKLMKMAGAVLTGGNGSVRRK--KKAVHNTTTTDDHRLHSTLNRIGVNAIPAIEEVNIFKDD-VVIHFLNPKVQSSIAANTWVVSGAPQTKKLQDILPGIIGRLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQ-----EDDDDEVPELVAGETFEAAAE 539 EKL K+ G RRK KK+ + DD +L + L ++ + +EE N FKDD V+HF VQ + NT V G PQ K LQD+ P II +LG +++D L +LA Q Q NA AP T+ E D+++PEL+ G++F+A E Sbjct: 6 EKLAKLQKLSANNKVGGTRRKLAKKSGTASANKDDSKLQAQLAKLKAVTMDQVEEANFFKDDGSVLHFNKVGVQVAPQHNTSVFYGIPQEKSLQDLFPSIIPQLGSESIDALTQLATQLQ----NAQAAAPATEGHEAGEKKDNDIPELIEGQSFDADVE 161
BLAST of CF836440 vs. ExPASy Swiss-Prot
Match: NACB_SCHPO (Nascent polypeptide-associated complex subunit beta OS=Schizosaccharomyces pombe GN=btf3 PE=2 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.877e-18 Identity = 54/148 (36.49%), Postives = 82/148 (55.41%), Query Frame = 3 Query: 75 MNVEKLMKMAGAVLTGGNGSVRRKKKAVHNT--TTTDDHRLHSTLNRIGVNAIPAIEEVNIFKDDV-VIHFLNPKVQSSIAANTWVVSGAPQTKKLQDILPGIIGRLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELV 509 M+ KL K+ GG G+ RRK K + + DD ++ L ++ + + I+EVN+FK+D VI+F P V SS+ T + G + K L +ILPGI+ LGP++L LR++AEQ + G A + DD E+P+LV Sbjct: 1 MDPSKLAKLQAGARIGGKGTPRRKVKKPSKSAMSAADDKKVQGALKKLNMQNLAGIQEVNMFKEDGGVINFRAPTVHSSLPNETTAIYGKAEEKTLSEILPGILNNLGPESLTALRQMAEQLKVSEGEKGADA----QADDGEIPDLV 144
BLAST of CF836440 vs. ExPASy Swiss-Prot
Match: NACB_CANGA (Nascent polypeptide-associated complex subunit beta OS=Candida glabrata GN=EGD1 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.134e-18 Identity = 56/152 (36.84%), Postives = 78/152 (51.32%), Query Frame = 3 Query: 87 KLMKMAGAVLTGGNGSVRRKKKAVHNTTTTDDHRLHSTLNRIGVNAIPAIEEVNIFKDD-VVIHFLNPKVQSSIAANTWVVSGAPQTKKLQDILPGIIGRLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELVAGETFEAAAE 539 KL KM+ GG + KK + DD +LH+ L ++ I + E N FKDD V+HF VQ + NT V G Q K LQ++ PGII +LG + + L +LA Q +K N G E D+ +PELV G++F+A E Sbjct: 10 KLQKMSAGNKVGGTRRKQAKKTGSGSAGNKDDTKLHNQLAKLHAVTIDNVAEANFFKDDGKVLHFNKVGVQVAPQHNTSVFYGMAQEKNLQELFPGIISQLGGEAIQALSQLAAQMEKAQANENAG-----EAKDEAIPELVEGQSFDAEVE 156
BLAST of CF836440 vs. ExPASy Swiss-Prot
Match: NACB_KLULA (Nascent polypeptide-associated complex subunit beta OS=Kluyveromyces lactis GN=EGD1 PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.317e-18 Identity = 56/154 (36.36%), Postives = 80/154 (51.95%), Query Frame = 3 Query: 84 EKLMKMAGAVLTGGNGSVRRKKKAVHNTTTTDDHRLHSTLNRIGVNAIPAIEEVNIFKDD-VVIHFLNPKVQSSIAANTWVVSGAPQTKKLQDILPGIIGRLGPDNLDNLRKLAEQFQK-QAPNAGTGAPTTQEDDDDEVPELVAGETFEAAAE 539 EKL K+ G RRK +++ DD +L L ++ + +++ N FKDD V+HF VQ + NT V G PQ K LQ++ P II ++G D ++ L ++A Q Q Q N AP + D D +PELV G+TFEA E Sbjct: 6 EKLAKLQKLSANNKVGGTRRKFAKKSGSSSKDDSKLQDQLQKLRAVTVDNVQQANFFKDDGTVLHFNKVGVQVAPQHNTSVFYGIPQEKSLQELFPDIIPQMGADAINALTQMASQLQSAQGANQQAAAPEAEGKDID-IPELVEGQTFEADVE 158
BLAST of CF836440 vs. ExPASy Swiss-Prot
Match: NACB_PICST (Nascent polypeptide-associated complex subunit beta OS=Pichia stipitis GN=EGD1 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.540e-17 Identity = 56/151 (37.09%), Postives = 82/151 (54.30%), Query Frame = 3 Query: 84 EKLMKMAGAVLTGGNGSVRRKKKAVHNTTTTDDHRLHSTLNRIGVNAIPAIEEVNIFKDD-VVIHFLNPKVQSSIAANTWVVSGAPQTKKLQDILPGIIGRLGPDNLDNLRKLAEQFQ--KQAPNAGTGAPTTQEDDDDEVPELVAGETFE 527 EKL K+ A GS + KK V T DD +L L ++ I +EE N F++D V+HF VQ + A+NT+ +G PQ K + ++P I+ +LG +NL+ LR+LAEQ Q K GAP D+ +P+L+ GE F+ Sbjct: 6 EKLAKLQKAAAKKVGGSRVKAKKVVK--TEQDDTKLIEALGKLKATKIENVEEANFFREDGKVLHFNRVGVQGAAASNTFAFTGYPQEKNVTQLIPQILPQLGAENLEILRQLAEQLQAGKAPTELNAGAPA---GGDEGIPDLIDGEKFD 151
BLAST of CF836440 vs. ExPASy Swiss-Prot
Match: NACB_LODEL (Nascent polypeptide-associated complex subunit beta OS=Lodderomyces elongisporus GN=EGD1 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.887e-17 Identity = 56/146 (38.36%), Postives = 82/146 (56.16%), Query Frame = 3 Query: 84 EKLMKMAGAVLTGGNGSVRRKKKAVHNTTTTDDHRLHSTLNRIGVNAIPAIEEVNIFKDD-VVIHFLNPKVQSSIAANTWVVSGAPQTKKLQDILPGIIGRLGPDNLDNLRKLAEQFQ--KQAPNAG-TGAPTTQEDDDDEVPELV 509 EKL K+ + GS + KK V T DD +L TL ++ I +EE N FKDD V+HF VQ + AANT+ +G PQ K + ++P I+ +LG +NL+ LR+LAEQ Q K + G G E+ ++++P+LV Sbjct: 6 EKLAKLQKSTAKKVGGSRVKAKKGVK--TEQDDTKLIETLGKLKATKIEGVEEANFFKDDGKVLHFNRVGVQGAPAANTFAFTGYPQEKNITQLIPQILPQLGAENLEILRQLAEQIQAGKNPKDFGAAGEAGATEEANEDIPDLV 149 The following BLAST results are available for this feature:
BLAST of CF836440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836440 ID=CF836440; Name=CF836440; organism=Citrus sinensis; type=EST; length=701bpback to top |