CF836448

Overview
NameCF836448
Unique NameCF836448
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length801
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836448 vs. ExPASy Swiss-Prot
Match: KPCD2_MOUSE (Serine/threonine-protein kinase D2 OS=Mus musculus GN=Prkd2 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.731e-11
Identity = 37/102 (36.27%), Postives = 56/102 (54.90%), Query Frame = -3
Query:  497 VGTPAYIAPEVLARKEYDGKSSDVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIDRIRNVQYFLP--DYVRVSADCRHLLSQIFVADPSKRIPIPEIKKHPW 796
            VGTPAY+APEVL  + Y+ +S D+WS GV +YV L G +PF + ED        D+I+N  +  P   +  +S+    L++ +      KR  + +   HPW
Sbjct:  713 VGTPAYLAPEVLLNQGYN-RSLDMWSVGVIMYVSLSGTFPFNEDEDIN------DQIQNAAFMYPASPWSHISSGAIDLINNLLQVKMRKRYSVDKSLSHPW 807          
BLAST of CF836448 vs. ExPASy Swiss-Prot
Match: CSKP_RAT (Peripheral plasma membrane protein CASK OS=Rattus norvegicus GN=Cask PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.731e-11
Identity = 39/126 (30.95%), Postives = 68/126 (53.97%), Query Frame = -3
Query:  449 VGTPAYIAPEVLARKEYDGKSSDVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIDRIRNVQYFL--PDYVRVSADCRHLLSQIFVADPSKRIPIPEIKKHPWFLK--------NLPKEIIEIEKTN 796
            VGTP ++APEV+ R+ Y GK  DVW CGV L+++L G  PF   ++     +  + I   +Y +    +  +S   + L+ ++ + DP++RI + E   HPW  +        +LP+ + ++ K N
Sbjct:  180 VGTPHFMAPEVVKREPY-GKPVDVWGCGVILFILLSGCLPFYGTKE-----RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFN 299          
BLAST of CF836448 vs. ExPASy Swiss-Prot
Match: CSKP_MOUSE (Peripheral plasma membrane protein CASK OS=Mus musculus GN=Cask PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.731e-11
Identity = 39/126 (30.95%), Postives = 68/126 (53.97%), Query Frame = -3
Query:  449 VGTPAYIAPEVLARKEYDGKSSDVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIDRIRNVQYFL--PDYVRVSADCRHLLSQIFVADPSKRIPIPEIKKHPWFLK--------NLPKEIIEIEKTN 796
            VGTP ++APEV+ R+ Y GK  DVW CGV L+++L G  PF   ++     +  + I   +Y +    +  +S   + L+ ++ + DP++RI + E   HPW  +        +LP+ + ++ K N
Sbjct:  180 VGTPHFMAPEVVKREPY-GKPVDVWGCGVILFILLSGCLPFYGTKE-----RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFN 299          
BLAST of CF836448 vs. ExPASy Swiss-Prot
Match: CSKP_HUMAN (Peripheral plasma membrane protein CASK OS=Homo sapiens GN=CASK PE=1 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 4.731e-11
Identity = 39/126 (30.95%), Postives = 68/126 (53.97%), Query Frame = -3
Query:  449 VGTPAYIAPEVLARKEYDGKSSDVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIDRIRNVQYFL--PDYVRVSADCRHLLSQIFVADPSKRIPIPEIKKHPWFLK--------NLPKEIIEIEKTN 796
            VGTP ++APEV+ R+ Y GK  DVW CGV L+++L G  PF   ++     +  + I   +Y +    +  +S   + L+ ++ + DP++RI + E   HPW  +        +LP+ + ++ K N
Sbjct:  180 VGTPHFMAPEVVKREPY-GKPVDVWGCGVILFILLSGCLPFYGTKE-----RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFN 299          
BLAST of CF836448 vs. ExPASy Swiss-Prot
Match: TSSK2_HUMAN (Testis-specific serine/threonine-protein kinase 2 OS=Homo sapiens GN=TSSK2 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 6.179e-11
Identity = 36/106 (33.96%), Postives = 56/106 (52.83%), Query Frame = -3
Query:  476 GTPAYIAPEVLARKEYDGKSSDVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIDRIRNVQYFLPDYVRVSADCRHLLSQIFVADPSKRIPIPEIKKHPWFLKNLPK 793
            G+ AY APEVL    Y  K  D+WS GV LY+M+ G+ P++D +     RK +   +  +   P    ++ +C+ L+ ++   D S+R+ I EI  H W     PK
Sbjct:  177 GSAAYAAPEVLQSIPYQPKVYDIWSLGVILYIMVCGSMPYDDSD----IRKMLRIQKEHRVDFPRSKNLTCECKDLIYRMLQPDVSQRLHIDEILSHSWLQPPKPK 278          
BLAST of CF836448 vs. ExPASy Swiss-Prot
Match: STK6_HUMAN (Serine/threonine-protein kinase 6 OS=Homo sapiens GN=AURKA PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 6.179e-11
Identity = 39/106 (36.79%), Postives = 59/106 (55.66%), Query Frame = -3
Query:  476 GTPAYIAPEVLARKEYDGKSSDVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIDRIRNVQYFLPDYVRVSADCRHLLSQIFVADPSKRIPIPEIKKHPWFLKNLPK 793
            GT  Y+ PE++  + +D K  D+WS GV  Y  LVG  PFE       +++T  RI  V++  PD+V   A  R L+S++   +PS+R  + E+ +HPW   N  K
Sbjct:  291 GTLDYLPPEMIEGRMHDEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITANSSK 389          
BLAST of CF836448 vs. ExPASy Swiss-Prot
Match: STK6L_XENLA (Serine/threonine-protein kinase Eg2-like OS=Xenopus laevis PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 6.179e-11
Identity = 37/103 (35.92%), Postives = 58/103 (56.31%), Query Frame = -3
Query:  485 GTPAYIAPEVLARKEYDGKSSDVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIDRIRNVQYFLPDYVRVSADCRHLLSQIFVADPSKRIPIPEIKKHPWFLKN 793
            GT  Y+ PE++  + +D K  D+WS GV  Y  LVG  PFE       +R    RI  V++  P YV  S + + L+S++   +P+ R+P+  + +HPW +KN
Sbjct:  298 GTLDYLPPEMIEGRMHDEKV-DLWSLGVLCYEFLVGKPPFETDTHQETYR----RISKVEFQYPPYV--SEEAKDLVSKLLKHNPNHRLPLKGVLEHPWIVKN 393          
BLAST of CF836448 vs. ExPASy Swiss-Prot
Match: SSP1_SCHPO (Serine/threonine-protein kinase ssp1 OS=Schizosaccharomyces pombe GN=ssp1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.070e-11
Identity = 41/112 (36.61%), Postives = 59/112 (52.68%), Query Frame = -3
Query:  482 TVGTPAYIAPEVLARKEYD------GKSSDVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIDRIRNVQYFLPDYVRVSADCRHLLSQIFVADPSKRIPIPEIKKHPWFLKNL 799
            TVGTPA+ APE L   + D       ++ DVW+ GVTL+ +L G  PF    +   F    D+I N +  +P    +  + R LL ++   DP +RI + E+K HPW L  L
Sbjct:  307 TVGTPAFFAPE-LCWTDLDRPRPKISEAIDVWALGVTLFCLLFGRCPFNASMEYELF----DKIVNERLNIPSTPDIGEEGRDLLKRLLCKDPEQRITLVEVKLHPWTLDGL 413          
BLAST of CF836448 vs. ExPASy Swiss-Prot
Match: KCC1B_HUMAN (Calcium/calmodulin-dependent protein kinase type 1B OS=Homo sapiens GN=PNCK PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 8.070e-11
Identity = 34/99 (34.34%), Postives = 53/99 (53.54%), Query Frame = -3
Query:  497 GTPAYIAPEVLARKEYDGKSSDVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIDRIRNVQYFLPDYVRVSADCRHLLSQIFVADPSKRIPIPEIKKHPW 793
            GTP Y+APE+L +K Y GK+ DVW+ GV  Y++L G  PF D  DP  F + +    + ++  P +  +S   +  +  +   DP KR    +  +H W
Sbjct:  174 GTPGYVAPELLEQKPY-GKAVDVWALGVISYILLCGYPPFYDESDPELFSQILR--ASYEFDSPFWDDISESAKDFIRHLLERDPQKRFTCQQALRHLW 269          
BLAST of CF836448 vs. ExPASy Swiss-Prot
Match: IPL1_CANAL (Spindle assembly checkpoint kinase OS=Candida albicans GN=IPL1 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.070e-11
Identity = 39/106 (36.79%), Postives = 58/106 (54.72%), Query Frame = -3
Query:  476 GTPAYIAPEVLARKEYDGKSSDVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIDRIRNVQYFLPDYVRVSADCRHLLSQIFVADPSKRIPIPEIKKHPWFLKNLPK 793
            GT  Y+ PE++  K +D  S D+W+ G+  Y +LVG  PFE      N   T ++I  V    P  + V  D   L+S++ V DP+KR+ + E+  H W +KN PK
Sbjct:  425 GTLDYLPPEMIESKSHDF-SVDIWALGILCYELLVGKPPFE----AINRNITYEKIAKVDIKYPSNLDV--DAIDLISKLVVKDPNKRLSLKEVLNHNWIIKNKPK 523          
The following BLAST results are available for this feature:
BLAST of CF836448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 270
Match NameE-valueIdentityDescription
KPCD2_MOUSE4.731e-1136.27Serine/threonine-protein kinase D2 OS=Mus musculus... [more]
CSKP_RAT4.731e-1130.95Peripheral plasma membrane protein CASK OS=Rattus ... [more]
CSKP_MOUSE4.731e-1130.95Peripheral plasma membrane protein CASK OS=Mus mus... [more]
CSKP_HUMAN4.731e-1130.95Peripheral plasma membrane protein CASK OS=Homo sa... [more]
TSSK2_HUMAN6.179e-1133.96Testis-specific serine/threonine-protein kinase 2 ... [more]
STK6_HUMAN6.179e-1136.79Serine/threonine-protein kinase 6 OS=Homo sapiens ... [more]
STK6L_XENLA6.179e-1135.92Serine/threonine-protein kinase Eg2-like OS=Xenopu... [more]
SSP1_SCHPO8.070e-1136.61Serine/threonine-protein kinase ssp1 OS=Schizosacc... [more]
KCC1B_HUMAN8.070e-1134.34Calcium/calmodulin-dependent protein kinase type 1... [more]
IPL1_CANAL8.070e-1136.79Spindle assembly checkpoint kinase OS=Candida albi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02P19_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02P19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836448 ID=CF836448; Name=CF836448; organism=Citrus sinensis; type=EST; length=801bp
TTTTTTTTTTTTTTTTTAAAATCCAAGTCCAATAATTGGACAATAAAAAA
GTGTCAAATATACAGTCAACAGATTCTTGTTCCTCGGTTGGCACTTGGAA
CCACCAACTGTTTCTGTGGTGATCCAGGTAAATACCATCCAATACGAAAT
TACTTTACATATTATAATAAGTGCCTTATTAACCTTCAATGACAGGAACA
GCTAAAAGCTTGAAAAACAAGCTCTCTCCATGTGATTTCTATTGCCATAC
TCACGGATCATGGCTCATATAATCACCGCTGGCATCAATCTCAAATTCTA
TGTCACCCTCCATGTCATCAGGGTCCGATGCCCCAGCAGCACCTTGCCCG
GCAACTTTCGTTGCTTCACCCGGCATCTTTGCCTCTTGTATGATACGCAT
TATTTCTTCAACACTCTGAGTTGGTTGGTCACGTCCTGCTTCCTTGTAAT
TTGTTTTCTCTATTTCAATTATCTCTTTCGGCAAATTCTTCAGGAACCAA
GGATGCTTTTTGATCTCTGGAATGGGGATCCTCTTTGAGGGATCAGCAAC
AAAAATCTGAGAAAGCAGATGCCTGCAATCCGCAGATACGCGTACATAGT
CGGGCAAGAAGTACTGAACATTCCTTATTCTATCAATTGTCTTGCGGAAG
TTTCTTGGATCTTCAGGATCCTCAAATGGATATGCACCCACCAACATCAC
ATACAGTGTCACTCCACAGGACCAAACATCTGAACTCTTGCCATCATATT
CCTTTCTTGCTAGGACCTCAGGGGCAATGTATGCTGGAGTACCAACTGTT
G
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