CF836449

Overview
NameCF836449
Unique NameCF836449
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length673
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836449 vs. ExPASy Swiss-Prot
Match: KS6A3_MOUSE (Ribosomal protein S6 kinase alpha-3 OS=Mus musculus GN=Rps6ka3 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.054e-15
Identity = 51/173 (29.48%), Postives = 93/173 (53.76%), Query Frame = 2
Query:  182 RYEPVKELGSGNFGVARLVRD---KRTKELVAVKYIERGK-----KIDENAQREIINHRSLRHPNIIRFKEVLLTPTHLAIVMEYAAGGELFARICSAGRFSEDEARFFFQQLISGVSYCHSMEICHRDLKLENTLLDGSPQPRLKICDFGYSKSGLLHSQPK-STVGTPAYI 673
            ++E +K LG G+FG   LV+       ++L A+K +++       ++    +R+I+    + HP I++      T   L +++++  GG+LF R+     F+E++ +F+  +L   + + HS+ I +RDLK EN LLD   +  +K+ DFG SK  + H +   S  GT  Y+
Sbjct:   67 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE--VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD--EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYM 235          

HSP 2 Score: 83.1889 bits (204), Expect = 1.376e-15
Identity = 55/153 (35.95%), Postives = 82/153 (53.59%), Query Frame = 2
Query:  167 IEMEERYEPVKELGSGNFGVARLVRDKRTKELVAVKYIERGKKIDENAQREIINHRSLRHPNIIRFKEVLLTPTHLAIVMEYAAGGELFARICSAGRFSEDEARFFFQQLISGVSYCHSMEICHRDLKLENTL-LDGSPQPR-LKICDFGYSK 619
            I+  + YE  +++G G++ V +    K T    AVK I++ K+ D   + EI+  R  +HPNII  K+V     ++ +V E   GGEL  +I     FSE EA      +   V Y H+  + HRDLK  N L +D S  P  ++ICDFG++K
Sbjct:  416 IQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-DPTEEIEILL-RYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAK 566          
BLAST of CF836449 vs. ExPASy Swiss-Prot
Match: KS6A3_HUMAN (Ribosomal protein S6 kinase alpha-3 OS=Homo sapiens GN=RPS6KA3 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.054e-15
Identity = 51/173 (29.48%), Postives = 93/173 (53.76%), Query Frame = 2
Query:  182 RYEPVKELGSGNFGVARLVRD---KRTKELVAVKYIERGK-----KIDENAQREIINHRSLRHPNIIRFKEVLLTPTHLAIVMEYAAGGELFARICSAGRFSEDEARFFFQQLISGVSYCHSMEICHRDLKLENTLLDGSPQPRLKICDFGYSKSGLLHSQPK-STVGTPAYI 673
            ++E +K LG G+FG   LV+       ++L A+K +++       ++    +R+I+    + HP I++      T   L +++++  GG+LF R+     F+E++ +F+  +L   + + HS+ I +RDLK EN LLD   +  +K+ DFG SK  + H +   S  GT  Y+
Sbjct:   67 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE--VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD--EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYM 235          

HSP 2 Score: 83.1889 bits (204), Expect = 1.376e-15
Identity = 55/153 (35.95%), Postives = 82/153 (53.59%), Query Frame = 2
Query:  167 IEMEERYEPVKELGSGNFGVARLVRDKRTKELVAVKYIERGKKIDENAQREIINHRSLRHPNIIRFKEVLLTPTHLAIVMEYAAGGELFARICSAGRFSEDEARFFFQQLISGVSYCHSMEICHRDLKLENTL-LDGSPQPR-LKICDFGYSK 619
            I+  + YE  +++G G++ V +    K T    AVK I++ K+ D   + EI+  R  +HPNII  K+V     ++ +V E   GGEL  +I     FSE EA      +   V Y H+  + HRDLK  N L +D S  P  ++ICDFG++K
Sbjct:  416 IQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-DPTEEIEILL-RYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAK 566          
BLAST of CF836449 vs. ExPASy Swiss-Prot
Match: KPCI_PONAB (Protein kinase C iota type OS=Pongo abelii GN=PRKCI PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.054e-15
Identity = 50/169 (29.59%), Postives = 87/169 (51.48%), Query Frame = 2
Query:  185 YEPVKELGSGNFGVARLVRDKRTKELVAVKYIER-----GKKIDENAQREIINHRSLRHPNIIRFKEVLLTPTHLAIVMEYAAGGELFARICSAGRFSEDEARFFFQQLISGVSYCHSMEICHRDLKLENTLLDGSPQPRLKICDFGYSKSGLLHSQPKST-VGTPAYI 673
            ++ ++ +G G++    LVR K+T  + A+K +++      + ID     + +  ++  HP ++       T + L  V+EY  GG+L   +    +  E+ ARF+  ++   ++Y H   I +RDLKL+N LLD   +  +K+ D+G  K GL      ST  GTP YI
Sbjct:  254 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDS--EGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYI 420          
BLAST of CF836449 vs. ExPASy Swiss-Prot
Match: KPCI_MOUSE (Protein kinase C iota type OS=Mus musculus GN=Prkci PE=1 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 1.054e-15
Identity = 50/169 (29.59%), Postives = 87/169 (51.48%), Query Frame = 2
Query:  185 YEPVKELGSGNFGVARLVRDKRTKELVAVKYIER-----GKKIDENAQREIINHRSLRHPNIIRFKEVLLTPTHLAIVMEYAAGGELFARICSAGRFSEDEARFFFQQLISGVSYCHSMEICHRDLKLENTLLDGSPQPRLKICDFGYSKSGLLHSQPKST-VGTPAYI 673
            ++ ++ +G G++    LVR K+T  + A+K +++      + ID     + +  ++  HP ++       T + L  V+EY  GG+L   +    +  E+ ARF+  ++   ++Y H   I +RDLKL+N LLD   +  +K+ D+G  K GL      ST  GTP YI
Sbjct:  253 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDS--EGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYI 419          
BLAST of CF836449 vs. ExPASy Swiss-Prot
Match: KPCI_HUMAN (Protein kinase C iota type OS=Homo sapiens GN=PRKCI PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.054e-15
Identity = 50/169 (29.59%), Postives = 87/169 (51.48%), Query Frame = 2
Query:  185 YEPVKELGSGNFGVARLVRDKRTKELVAVKYIER-----GKKIDENAQREIINHRSLRHPNIIRFKEVLLTPTHLAIVMEYAAGGELFARICSAGRFSEDEARFFFQQLISGVSYCHSMEICHRDLKLENTLLDGSPQPRLKICDFGYSKSGLLHSQPKST-VGTPAYI 673
            ++ ++ +G G++    LVR K+T  + A+K +++      + ID     + +  ++  HP ++       T + L  V+EY  GG+L   +    +  E+ ARF+  ++   ++Y H   I +RDLKL+N LLD   +  +K+ D+G  K GL      ST  GTP YI
Sbjct:  254 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDS--EGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYI 420          
BLAST of CF836449 vs. ExPASy Swiss-Prot
Match: KPCD3_MOUSE (Serine/threonine-protein kinase D3 OS=Mus musculus GN=Prkd3 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.054e-15
Identity = 54/162 (33.33%), Postives = 85/162 (52.47%), Query Frame = 2
Query:  203 LGSGNFGVARLVRDKRTKELVAVKYIERGK---KIDENAQREIINHRSLRHPNIIRFKEVLLTPTHLAIVMEYAAGGELFARICSA-GRFSEDEARFFFQQLISGVSYCHSMEICHRDLKLENTLL-DGSPQPRLKICDFGYSKSGLLHSQPKSTVGTPAYI 673
            LGSG FG+    + ++T   VA+K I++ +   K +   + E+   ++L HP I+  + +  TP  + +VME   G  L   + S   R  E   +F   Q++  +   H   I H DLK EN LL    P P++K+CDFG+++     S  +S VGTPAY+
Sbjct:  581 LGSGQFGIVYGGKHRKTGRDVAIKVIDKMRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGDMLEMILSSEKSRLPERITKFMVTQILVALRNLHFKNIVHCDLKPENVLLASAEPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYL 742          
BLAST of CF836449 vs. ExPASy Swiss-Prot
Match: KPCD3_HUMAN (Serine/threonine-protein kinase D3 OS=Homo sapiens GN=PRKD3 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.054e-15
Identity = 54/162 (33.33%), Postives = 85/162 (52.47%), Query Frame = 2
Query:  203 LGSGNFGVARLVRDKRTKELVAVKYIERGK---KIDENAQREIINHRSLRHPNIIRFKEVLLTPTHLAIVMEYAAGGELFARICSA-GRFSEDEARFFFQQLISGVSYCHSMEICHRDLKLENTLL-DGSPQPRLKICDFGYSKSGLLHSQPKSTVGTPAYI 673
            LGSG FG+    + ++T   VA+K I++ +   K +   + E+   ++L HP I+  + +  TP  + +VME   G  L   + S   R  E   +F   Q++  +   H   I H DLK EN LL    P P++K+CDFG+++     S  +S VGTPAY+
Sbjct:  582 LGSGQFGIVYGGKHRKTGRDVAIKVIDKMRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGDMLEMILSSEKSRLPERITKFMVTQILVALRNLHFKNIVHCDLKPENVLLASAEPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYL 743          
BLAST of CF836449 vs. ExPASy Swiss-Prot
Match: KPCA_MOUSE (Protein kinase C alpha type OS=Mus musculus GN=Prkca PE=1 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 1.054e-15
Identity = 54/163 (33.13%), Postives = 83/163 (50.92%), Query Frame = 2
Query:  203 LGSGNFGVARLVRDKRTKELVAVKYIERGKKI-DENAQREIINHRSL----RHPNIIRFKEVLLTPTHLAIVMEYAAGGELFARICSAGRFSEDEARFFFQQLISGVSYCHSMEICHRDLKLENTLLDGSPQPRLKICDFGYSKSGLLHSQPKST-VGTPAYI 673
            LG G+FG   L   K T+EL A+K +++   I D++ +  ++  R L    + P + +      T   L  VMEY  GG+L   I   G+F E +A F+  ++  G+ + H   I +RDLKL N +L+   +  +KI DFG  K  ++      T  GTP YI
Sbjct:  345 LGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLNNVMLNS--EGHIKIADFGMCKEHMMDGVTTRTFCGTPDYI 505          
BLAST of CF836449 vs. ExPASy Swiss-Prot
Match: KPC2_CAEEL (Protein kinase C-like 2 OS=Caenorhabditis elegans GN=pkc-2 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.054e-15
Identity = 55/163 (33.74%), Postives = 83/163 (50.92%), Query Frame = 2
Query:  203 LGSGNFGVARLVRDKRTKELVAVKYIERGKKI-DENAQREIINHRSLRHPN----IIRFKEVLLTPTHLAIVMEYAAGGELFARICSAGRFSEDEARFFFQQLISGVSYCHSMEICHRDLKLENTLLDGSPQPRLKICDFGYSKSGLL-HSQPKSTVGTPAYI 673
            LG G+FG   L   K TKEL A+K +++   I D++ +  +   R L  P     ++       T   L  VME+  GG+L  +I   G+F E  A F+  ++  G+ + HS  I +RDLKL+N +L+      +KI DFG  K  +   +  K+  GTP YI
Sbjct:  354 LGKGSFGKVLLGEQKTTKELFAIKVLKKDVIIQDDDVECTMTEKRVLALPEKPSFLVALHSCFQTMDRLYFVMEFVNGGDLMYQIQQVGKFKEPVAVFYAAEIAVGLFFLHSKGIIYRDLKLDNVMLE--RDGHIKITDFGMCKENIFGDATTKTFCGTPDYI 514          
BLAST of CF836449 vs. ExPASy Swiss-Prot
Match: DUN1_YEAST (DNA damage response protein kinase DUN1 OS=Saccharomyces cerevisiae GN=DUN1 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.054e-15
Identity = 53/191 (27.75%), Postives = 94/191 (49.21%), Query Frame = 2
Query:  179 ERYEPVKELGSGNFGVARLVRDKRTKELVAVKYIERGKKIDENAQREIINHRSL----RHPNIIRFKEVLLTPTHLA-----IVMEYAAGGELFARICSAGRFSEDEARFFFQQLISGVSYCHSMEICHRDLKLENTLLDGSPQP-----------------RLKICDFGYSKSGLLHSQPKSTVGTPAYI 673
            ++Y   KELG+G++ + +  ++K+T + VAVK     +  D+   ++     ++    +HPNI+   +  + P   +     +V+E    GELF RI       +DE++  F+QL++G+ Y H   I HRD+K EN LL+ + +                  ++KI DFG +K         +  GTP+Y+
Sbjct:  198 DKYLLGKELGAGHYALVKEAKNKKTGQQVAVKIFHAQQNDDQKKNKQFREETNILMRVQHPNIVNLLDSFVEPISKSQIQKYLVLEKIDDGELFERIVRKTCLRQDESKALFKQLLTGLKYLHEQNIIHRDIKPENILLNITRRENPSQVQLGPWDEDEIDIQVKIADFGLAKFTGEMQFTNTLCGTPSYV 388          
The following BLAST results are available for this feature:
BLAST of CF836449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KS6A3_MOUSE1.054e-1529.48Ribosomal protein S6 kinase alpha-3 OS=Mus musculu... [more]
KS6A3_HUMAN1.054e-1529.48Ribosomal protein S6 kinase alpha-3 OS=Homo sapien... [more]
KPCI_PONAB1.054e-1529.59Protein kinase C iota type OS=Pongo abelii GN=PRKC... [more]
KPCI_MOUSE1.054e-1529.59Protein kinase C iota type OS=Mus musculus GN=Prkc... [more]
KPCI_HUMAN1.054e-1529.59Protein kinase C iota type OS=Homo sapiens GN=PRKC... [more]
KPCD3_MOUSE1.054e-1533.33Serine/threonine-protein kinase D3 OS=Mus musculus... [more]
KPCD3_HUMAN1.054e-1533.33Serine/threonine-protein kinase D3 OS=Homo sapiens... [more]
KPCA_MOUSE1.054e-1533.13Protein kinase C alpha type OS=Mus musculus GN=Prk... [more]
KPC2_CAEEL1.054e-1533.74Protein kinase C-like 2 OS=Caenorhabditis elegans ... [more]
DUN1_YEAST1.054e-1527.75DNA damage response protein kinase DUN1 OS=Sacchar... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02P19_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02P19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836449 ID=CF836449; Name=CF836449; organism=Citrus sinensis; type=EST; length=673bp
TGTTGGAACTCCGTAGGGTCATTTTGCTGCCCATACACACTCAGTCTCTG
GTTTGTTTCATCTTTGTTCTAGTTTGAGTTTTGCTATTGAGGATTTGTTT
TGTGGATTTTGAGTCTTGCTATTGAGGTTGGTGAGTGTGCAATTGTAAAG
TGGTCATTGGTGGTGGATTGAGATGGAAGAGAGATATGAGCCAGTGAAGG
AGCTTGGGTCTGGAAATTTTGGGGTGGCAAGATTGGTCAGAGATAAGAGG
ACTAAGGAACTTGTTGCTGTCAAATACATAGAAAGAGGCAAGAAGATTGA
TGAGAATGCTCAGAGGGAAATCATCAACCACAGATCTCTGAGGCATCCAA
ACATTATCAGGTTCAAAGAGGTGTTGTTGACTCCAACTCACTTAGCTATT
GTCATGGAATATGCTGCTGGTGGTGAACTCTTTGCAAGAATATGCAGTGC
TGGTCGATTTAGCGAAGATGAGGCTAGATTTTTCTTCCAGCAGCTAATAT
CTGGAGTCAGCTACTGTCATTCTATGGAAATTTGTCATAGGGATCTCAAG
TTGGAAAACACTCTATTGGATGGAAGTCCACAACCACGGCTGAAGATATG
CGACTTTGGTTACTCAAAGTCAGGATTGTTGCACTCGCAACCAAAATCAA
CAGTTGGTACTCCAGCATACATT
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